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2021 Journal Article Synbiotics Easing Renal Failure by Improving Gut Microbiology II (SYNERGY II): a feasibility randomized controlled trialMcFarlane, Catherine, Krishnasamy, Rathika, Stanton, Tony, Savill, Emma, Snelson, Matthew, Mihala, Gabor, Kelly, Jaimon T., Morrison, Mark, Johnson, David W. and Campbell, Katrina L. (2021). Synbiotics Easing Renal Failure by Improving Gut Microbiology II (SYNERGY II): a feasibility randomized controlled trial. Nutrients, 13 (12) 4481, 4481. doi: 10.3390/nu13124481 |
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2021 Journal Article Diet quality and protein-bound uraemic toxins: investigation of novel risk factors and the role of microbiome in chronic kidney diseaseMcFarlane, Catherine, Krishnasamy, Rathika, Stanton, Tony, Savill, Emma, Snelson, Matthew, Mihala, Gabor, Morrison, Mark, Johnson, David W. and Campbell, Katrina L. (2021). Diet quality and protein-bound uraemic toxins: investigation of novel risk factors and the role of microbiome in chronic kidney disease. Journal of Renal Nutrition, 32 (5), 542-551. doi: 10.1053/j.jrn.2021.10.003 |
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2021 Journal Article Draft genome sequence of streptococcus salivarius AGIRA0003, isolated from functional gastrointestinal disorder duodenal tissueHoedt, Emily C., Shanahan, Erin R., Keely, Simon, Shah, Ayesha, Burns, Grace L., Holtmann, Gerald J., Talley, Nicholas J. and Morrison, Mark (2021). Draft genome sequence of streptococcus salivarius AGIRA0003, isolated from functional gastrointestinal disorder duodenal tissue. Microbiology Resource Announcements, 10 (39) e00758, e0075821. doi: 10.1128/MRA.00758-21 |
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2021 Journal Article Concomitant irritable bowel syndrome does not influence the response to antimicrobial therapy in patients with functional dyspepsiaShah, Ayesha, Gurusamy, Saravana Ruban, Hansen, Teressa, Callaghan, Gavin, Talley, Nicholas J., Koloski, Natasha, Walker, Marjorie M., Jones, Michael P., Morrison, Mark and Holtmann, Gerald J. (2021). Concomitant irritable bowel syndrome does not influence the response to antimicrobial therapy in patients with functional dyspepsia. Digestive Diseases and Sciences, 67 (6), 2299-2309. doi: 10.1007/s10620-021-07149-1 |
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2021 Journal Article Novel strain-level resolution of Crohn’s disease mucosa-associated microbiota via an ex vivo combination of microbe culture and metagenomic sequencingTeh, J. J., Berendsen, E. M., Hoedt, E. C., Kang, S., Zhang, J., Zhang, F., Liu, Q., Hamilton, A. L., Wilson-O’Brien, A., Ching, J., Sung, J. J. Y., Yu, J., Ng, S. C., Kamm, M. A. and Morrison, M. (2021). Novel strain-level resolution of Crohn’s disease mucosa-associated microbiota via an ex vivo combination of microbe culture and metagenomic sequencing. The ISME Journal, 15 (11), 3326-3338. doi: 10.1038/s41396-021-00991-1 |
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2021 Journal Article Small intestinal bacterial overgrowth in functional dyspepsia: a systematic review and meta-analysisGurusamy, Saravana Ruban, Shah, Ayesha, Talley, Nicholas J., Koloski, Natasha, Jones, Michael P., Walker, Marjorie M., Morrison, Mark and Holtmann, Gerald (2021). Small intestinal bacterial overgrowth in functional dyspepsia: a systematic review and meta-analysis. The American Journal of Gastroenterology, 116 (5), 935-942. doi: 10.14309/ajg.0000000000001197 |
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2021 Journal Article Wheat-based food form has a greater effect than amylose content on fermentation outcomes and microbial community shifts in an in vitro fermentation modelBui, Alexander T., Williams, Barbara A., Murtaza, Nida, Lisle, Allan, Mikkelsen, Deirdre, Morrison, Mark and Gidley, Michael J. (2021). Wheat-based food form has a greater effect than amylose content on fermentation outcomes and microbial community shifts in an in vitro fermentation model. Food Hydrocolloids, 114 106560, 1-9. doi: 10.1016/j.foodhyd.2020.106560 |
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2021 Journal Article Chemoradiation therapy changes oral microbiome and metabolomic profiles in patients with oral cavity cancer and oropharyngeal cancerLim, Yenkai, Tang, Kai Dun, Karpe, Avinash V., Beale, David J., Totsika, Makrina, Kenny, Liz, Morrison, Mark and Punyadeera, Chamindie (2021). Chemoradiation therapy changes oral microbiome and metabolomic profiles in patients with oral cavity cancer and oropharyngeal cancer. Head and Neck, 43 (5), 1521-1534. doi: 10.1002/hed.26619 |
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2021 Journal Article Characteristics of the gastrointestinal microbiota in paired live kidney donors and recipientsChan, Samuel, Morrison, Mark, Hawley, Carmel M., Campbell, Scott B., Francis, Ross S., Isbel, Nicole M., Pascoe, Elaine M. and Johnson, David W. (2021). Characteristics of the gastrointestinal microbiota in paired live kidney donors and recipients. Nephrology, 26 (5), 471-478. doi: 10.1111/nep.13853 |
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2021 Journal Article Microbiome-immune interactions in tuberculosisMori, Giorgia, Morrison, Mark and Blumenthal, Antje (2021). Microbiome-immune interactions in tuberculosis. PLoS Pathogens, 17 (4) e1009377, e1009377. doi: 10.1371/journal.ppat.1009377 |
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2021 Journal Article From trash to gold: Gastrointestinal microbiome research in patients with functional gastrointestinal disordersHoltmann, Gerald, Shah, Ayesha and Morrison, Mark (2021). From trash to gold: Gastrointestinal microbiome research in patients with functional gastrointestinal disorders. Journal of Investigative Medicine, 69 (4), 793-795. doi: 10.1136/jim-2021-001903 |
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2021 Journal Article Pregnant women who develop preeclampsia have lower abundance of the butyrate-producer Coprococcus in their gut microbiotaAltemani, Faisal, Barrett, Helen L., Gomez-Arango, Luisa, Josh, Peter, McIntyre, H. David, Callaway, Leonie K., Morrison, Mark, Tyson, Gene W. and Dekker Nitert, Marloes (2021). Pregnant women who develop preeclampsia have lower abundance of the butyrate-producer Coprococcus in their gut microbiota. Pregnancy Hypertension, 23, 211-219. doi: 10.1016/j.preghy.2021.01.002 |
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2021 Journal Article Streptococcus species enriched in the oral cavity of patients with RA are a source of peptidoglycan-polysaccharide polymers that can induce arthritis in miceMoentadj, Rabia, Wang, Yiwen, Bowerman, Kate, Rehaume, Linda, Nel, Hendrik, O Cuiv, Paraic, Stephens, Juliette, Baharom, Amalina, Maradana, Muralidhara, Lakis, Vanessa, Morrison, Mark, Wells, Timothy, Hugenholtz, Philip, Benham, Helen, Le Cao, Kim-Anh and Thomas, Ranjeny (2021). Streptococcus species enriched in the oral cavity of patients with RA are a source of peptidoglycan-polysaccharide polymers that can induce arthritis in mice. Annals of the Rheumatic Diseases, 80 (5) annrheumdis-2020-219009, annrheumdis-2020. doi: 10.1136/annrheumdis-2020-219009 |
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2021 Journal Article Elucidation of Proteus mirabilis as a key bacterium in Crohn's Disease inflammationZhang, Jingwan, Hoedt, Emily C., Liu, Qin, Berendsen, Erwin, Teh, Jing Jie, Hamilton, Amy, O' Brien, Amy Wilson, Ching, Jessica Y L, Wei, Hong, Yang, Keli, Xu, Zhilu, Wong, Sunny H., Mak, Joyce W. Y., Sung, Joseph J. Y., Morrison, Mark, Yu, Jun, Kamm, Michael A. and Ng, Siew C. (2021). Elucidation of Proteus mirabilis as a key bacterium in Crohn's Disease inflammation. Gastroenterology, 160 (1), 317-330.e11. doi: 10.1053/j.gastro.2020.09.036 |
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2021 Journal Article Methane positive small intestinal bacterial overgrowth in inflammatory bowel disease and irritable bowel syndrome: a systematic review and meta-analysisGandhi, Arjun, Shah, Ayesha, Jones, Michael P., Koloski, Natasha, Talley, Nicholas J., Morrison, Mark and Holtmann, Gerald (2021). Methane positive small intestinal bacterial overgrowth in inflammatory bowel disease and irritable bowel syndrome: a systematic review and meta-analysis. Gut Microbes, 13 (1) 1933313, 1-16. doi: 10.1080/19490976.2021.1933313 |
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2021 Journal Article Is a fundamental design change for gastrointestinal endoscopes required?Holtmann, Gerald J., Huelsen, Alexander, Shah, Ayesha, Hourigan, Luke F. and Morrison, Mark (2021). Is a fundamental design change for gastrointestinal endoscopes required?. Journal of Clinical Gastroenterology, 55 (1), 21-24. doi: 10.1097/MCG.0000000000001430 |
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2020 Journal Article In vitro fermentation outcomes of arabinoxylan and galactoxyloglucan depend on fecal inoculum more than substrate chemistryFeng, Guangli, Mikkelsen, Deirdre, Hoedt, Emily C., Williams, Barbara A., Flanagan, Bernadine M., Morrison, Mark and Gidley, Michael J. (2020). In vitro fermentation outcomes of arabinoxylan and galactoxyloglucan depend on fecal inoculum more than substrate chemistry. Food and Function, 11 (9), 7892-7904. doi: 10.1039/d0fo01103g |
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2020 Journal Article Targeting the gut microbiome as a treatment for primary sclerosing cholangitis: a conceptional frameworkShah, Ayesha, Macdonald, Graeme A., Morrison, Mark and Holtmann, Gerald (2020). Targeting the gut microbiome as a treatment for primary sclerosing cholangitis: a conceptional framework. The American Journal of Gastroenterology, 115 (6), 814-822. doi: 10.14309/ajg.0000000000000604 |
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2020 Journal Article Chronic high-fat diet induces early Barrett’s esophagus in mice through lipidome remodelingMolendijk, Jeffrey, Nguyen, Thi-My-Tam, Brown, Ian, Mohamed, Ahmed, Lim, Yenkai, Barclay, Johanna, Hodson, Mark P., Hennessy, Thomas P., Krause, Lutz, Morrison, Mark and Hill, Michelle M. (2020). Chronic high-fat diet induces early Barrett’s esophagus in mice through lipidome remodeling. Biomolecules, 10 (5) 776, 776. doi: 10.3390/biom10050776 |
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2020 Journal Article Bile acids associate with specific gut microbiota, low-level alcohol consumption and liver fibrosis in patients with non-alcoholic fatty liver diseaseAdams, Leon A., Wang, Zhengyi, Liddle, Chris, Melton, Phillip E., Ariff, Amir, Chandraratna, Harsha, Tan, Jeremy, Ching, Helena, Coulter, Sally, de Boer, Bastiaan, Christophersen, Claus T., O'Sullivan, Therese A., Morrison, Mark and Jeffrey, Gary P. (2020). Bile acids associate with specific gut microbiota, low-level alcohol consumption and liver fibrosis in patients with non-alcoholic fatty liver disease. Liver International, 40 (6) liv.14453, 1356-1365. doi: 10.1111/liv.14453 |
