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2026 Journal Article A molecular inventory of the faecal microbiomes of 23 marsupial speciesBowerman, Kate L., Soo, Rochelle M., Chaumeil, Pierre-Alain, Blyton, Michaela D. J., Sørensen, Mette, Gunbilig, Disan, Malig, Maika, Islam, Moutusee, Zaugg, Julian, Wood, David L. A., Liachko, Ivan, Auch, Benjamin, Morrison, Mark, Krause, Lutz, Lindberg Møller, Birger, Neilson, Elizabeth H. J. and Hugenholtz, Philip (2026). A molecular inventory of the faecal microbiomes of 23 marsupial species. Microbial Genomics, 12 (1). doi: 10.1099/mgen.0.001601 |
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2026 Journal Article Effects of dietary FODMAP content on the faecal microbiome and gastrointestinal physiology in healthy adults: a randomised, controlled cross-over feeding studyMurtaza, Nida, Collins, Lyndal, Yao, Chu K., Thwaites, Phoebe A., Veitch, Patricia, Varney, Jane E., Gill, Paul A., Gibson, Peter R., Morrison, Mark and Muir, Jane G. (2026). Effects of dietary FODMAP content on the faecal microbiome and gastrointestinal physiology in healthy adults: a randomised, controlled cross-over feeding study. The British Journal of Nutrition, 134 (9), 712-726. doi: 10.1017/s0007114525000868 |
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2025 Journal Article Metagenomic analysis of fecal microbiomes reveals genetic potential for diverse hydrogen management strategies in marsupialsBowerman, Kate L., Lu, Yang, McRae, Harley, Volmer, James G., Zaugg, Julian, Pope, Phillip B., Hugenholtz, Philip, Greening, Chris, Morrison, Mark, Soo, Rochelle M. and Evans, Paul N. (2025). Metagenomic analysis of fecal microbiomes reveals genetic potential for diverse hydrogen management strategies in marsupials. mSystems e01608-25, e0160825. doi: 10.1128/msystems.01608-25 |
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2025 Journal Article The microbiome and gut–lung axis in nontuberculous mycobacterial pulmonary diseaseThompson, Ria N., Blumenthal, Antje, Morrison, Mark and Thomson, Rachel M. (2025). The microbiome and gut–lung axis in nontuberculous mycobacterial pulmonary disease. PLOS Pathogens, 21 (10) e1013603, e1013603. doi: 10.1371/journal.ppat.1013603 |
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2025 Journal Article Pro-inflammatory macrophages transporting gut-derived bacterial DNA drive autoimmune arthritis in spondyloarthropathyCai, Benjamin, Giri, Rabina, Cameron, Amy J., Rahman, M. Arifur, Small, Annabelle, Altmann, Christopher, Lim, Yenkai, Rehaume, Linda M., Morrison, Mark, Wechalekar, Mihir D., Begun, Jakob, Bergot, Anne-Sophie and Thomas, Ranjeny (2025). Pro-inflammatory macrophages transporting gut-derived bacterial DNA drive autoimmune arthritis in spondyloarthropathy. JCI Insight, 10 (17) e188028, 1-19. doi: 10.1172/jci.insight.188028 |
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2025 Conference Publication Faecal microbiota transplantation for active Crohn's disease: the MIRO (Microbial Restoration) randomised placebo-controlled trialFehily, Sasha R., Wright, Emily K., Bogatic, Damjana, O'Brien, Amy L. Wilson, Basnayake, Chamara, Stanley, Annalise, Marks, Elise, Russell, Erin, Rong, Yuwei J., Gory, Ilana, Ardalan, Zaid, Hamilton, Amy L., Morrison, Mark, Thompson, Alexander, Bryant, Robert V., Costello, Samuel P. and Kamm, Michael A. (2025). Faecal microbiota transplantation for active Crohn's disease: the MIRO (Microbial Restoration) randomised placebo-controlled trial. HOBOKEN: WILEY. |
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2025 Journal Article Mechanisms of action and clinical effectiveness of herbal treatments for disorders of gut-brain interactionMoniruzzaman, Md, Shah, Ayesha, Morrison, Mark, Koloski, Natasha, Gwee, Kok Ann, Chen, Minhu, Kim, YongSung, Ayaki, Kana, Efferth, Thomas and Holtmann, Gerald (2025). Mechanisms of action and clinical effectiveness of herbal treatments for disorders of gut-brain interaction. Digestive and Liver Disease, 57 (9), 1717-1729. doi: 10.1016/j.dld.2025.07.010 |
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2025 Journal Article Clinical Trial: Effect of a 28‐Day Low <scp>FODMAP</scp> Diet on Gastrointestinal Symptoms Associated With Endometriosis (<scp>EndoFOD</scp>)—A Randomised, Controlled Crossover Feeding StudyVarney, Jane E., So, Daniel, Gibson, Peter R., Rhys‐Jones, Dakota, Lee, Yuet Sang Jimmy, Fisher, Jane, Moore, Judith S., Ratner, Roni, Morrison, Mark, Burgell, Rebecca E. and Muir, Jane G. (2025). Clinical Trial: Effect of a 28‐Day Low FODMAP Diet on Gastrointestinal Symptoms Associated With Endometriosis (EndoFOD)—A Randomised, Controlled Crossover Feeding Study. Alimentary Pharmacology & Therapeutics, 61 (12), 1889-1903. doi: 10.1111/apt.70161 |
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2025 Conference Publication Proteus Mirabilis Promotes Postoperative Recurrence Of Crohn’s Disease Through Lymphatic Translocation And Aberrant Immune Activation Elicited By Intestinal RecolonizationZhang, Jingwan, Zhang, Yao, Zhang, Mengjing, Tu, Yiwen, Liu, Chengyu, SUN, Qianru, Hao, Fangjia, Kang, Seungha, Hamilton, Amy L., Wilson-O’Brien, Amy, Morrison, Mark, Kamm, Michael A., Zhang, Lin, Zou, Duowu, Chan, Francis K. and Ng, Siew C. (2025). Proteus Mirabilis Promotes Postoperative Recurrence Of Crohn’s Disease Through Lymphatic Translocation And Aberrant Immune Activation Elicited By Intestinal Recolonization. Digestive Disease Week (DDW) 2025, San Diego, CA United States, 3-6 August 2025. Philadelphia, PA United States: Elsevier. doi: 10.1016/s0016-5085(25)01708-1 |
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2025 Conference Publication Functional And Taxonomic Biomarkers Of Crohn’s Disease And Health From The Colonic Mucosa-associated Microbiota. The Enigma StudyKang, Seungha, Teh, Jing Jie, Zhang, Jingwan, Zheng, Jiaying, Hu, Jielun, SUN, Qianru, Hamilton, Amy L., Wilson-O’Brien, Amy, Ching, Jessica Y., Trakman, Gina, Lin, Winnie Y., Ng, Siew C., Kamm, Michael A. and Morrison, Mark (2025). Functional And Taxonomic Biomarkers Of Crohn’s Disease And Health From The Colonic Mucosa-associated Microbiota. The Enigma Study. Digestive Disease Week (DDW) 2025, San Diego, CA United States, 3-6 August 2025. Philadelphia, PA United States: Elsevier. doi: 10.1016/s0016-5085(25)03034-3 |
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2025 Conference Publication Development Of A Rationally Designed Bacterial Consortium That Can Restore Gut Homeostasis And Improve Therapeutic Response In Crohn’s DiseaseHao, Fangjia, Zhu, Wenyi, Zhang, Mengjing, Zheng, Jiaying, Kang, Seungha, Hamilton, Amy L., Wilson-O’Brien, Amy, Sun, Yang, Miao, Yinglei, Morrison, Mark, Kamm, Michael A., Chan, Francis K., Zhang, Jingwan and Ng, Siew C. (2025). Development Of A Rationally Designed Bacterial Consortium That Can Restore Gut Homeostasis And Improve Therapeutic Response In Crohn’s Disease. Digestive Disease Week (DDW) 2025, San Diego, CA United States, 3-6 August 2025. Philadelphia, PA United States: Elsevier. doi: 10.1016/s0016-5085(25)01265-x |
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2025 Conference Publication Gut microbiome signatures discriminate nontuberculous mycobacterial pulmonary disease patients requiring treatment from those with stable diseaseThompson, R., Lim, Y., Goh, F., Blumenthal, A., Morrison, M. and Thomson, R. (2025). Gut microbiome signatures discriminate nontuberculous mycobacterial pulmonary disease patients requiring treatment from those with stable disease. ATS International Conference, San Francisco, CA USA, 16-21 May 2025. New York, NY USA: American Thoracic Society. |
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2025 Conference Publication Cloaking antibodies prevent immune detection and destruction of inflammatory Crohn’s microbiota, resulting in treatment resistance: the first description of a central pathogenic mechanismFeng, Wenkang, Tovey-Matthews, Abigail, Schulberg, Julien D., Hamilton, Amy L., Lovett, Grace C., Wright, Emily K., Kamm, Michael A., Morrison, Mark and Wells, Timothy (2025). Cloaking antibodies prevent immune detection and destruction of inflammatory Crohn’s microbiota, resulting in treatment resistance: the first description of a central pathogenic mechanism. Digestive Disease Week (DDW) 2025, San Diego, CA United States, 3-6 August 2025. Philadelphia, PA United States: Elsevier. doi: 10.1016/s0016-5085(25)02172-9 |
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2025 Conference Publication Functional Dyspepsia Duodenal Mucosal Associated Microbiota Associations With Mucosal And Peripheral Immune HomeostasisHoedt, Emily C., Burns, Grace L., Kang, Seungha, Bruce, Jessica K., Morrison, Mark, Keely, Simon and Talley, Nicholas J. (2025). Functional Dyspepsia Duodenal Mucosal Associated Microbiota Associations With Mucosal And Peripheral Immune Homeostasis. Digestive Disease Week (DDW) 2025, San Diego, CA United States, 3-6 August 2025. Philadelphia, PA United States: Elsevier. doi: 10.1016/s0016-5085(25)02885-9 |
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2025 Conference Publication Exploring the link between duodenal microbial dysbiosis, immune regulation, and clinical symptoms in gastroparesisMoniruzzaman, Md, Shah, Ayesha, Lim, Yenkai, Fairlie, Thomas, Do, Anh, Morrison, Mark, Koloski, Natasha and Holtmann, Gerald J. (2025). Exploring the link between duodenal microbial dysbiosis, immune regulation, and clinical symptoms in gastroparesis. Digestive Disease Week 2025 (DDW2025), San Diego, CA, United States and online, 3-6 may 2025. Philadelphia, PA, United States: Elsevier. doi: 10.1016/s0016-5085(25)04239-8 |
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2025 Journal Article Is the biogeography of the mucosa-associated microbiota a key factor affecting primary sclerosing cholangitis disease course and treatment?Lim, Yenkai, Kang, Seungha, Shah, Ayesha, Holtmann, Gerald and Morrison, Mark (2025). Is the biogeography of the mucosa-associated microbiota a key factor affecting primary sclerosing cholangitis disease course and treatment?. Gut, 74 (4), 692-693. doi: 10.1136/gutjnl-2024-334069 |
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2025 Journal Article SCFA biotherapy delays diabetes in humanized gnotobiotic mice by remodeling mucosal homeostasis and metabolomeTillett, Bree J., Dwiyanto, Jacky, Secombe, Kate R., George, Thomas, Zhang, Vivian, Anderson, Dovile, Duggan, Emily, Giri, Rabina, Loo, Dorothy, Stoll, Thomas, Morrison, Mark, Begun, Jakob, Hill, Michelle M., Gurzov, Esteban N., Bell, Kirstine J., Saad, Sonia, Barlow, Christopher K., Creek, Darren J., Chong, Chun Wie, Mariño, Eliana and Hamilton-Williams, Emma E. (2025). SCFA biotherapy delays diabetes in humanized gnotobiotic mice by remodeling mucosal homeostasis and metabolome. Nature Communications, 16 (1) 2893, 1-20. doi: 10.1038/s41467-025-58319-y |
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2025 Journal Article Small intestinal bacterial overgrowth in chronic liver disease: an updated systematic review and meta-analysis of case-control studiesShah, Ayesha, Spannenburg, Liam, Thite, Parag, Morrison, Mark, Fairlie, Thomas, Koloski, Natasha, Kashyap, Purna C., Pimentel, Mark, Rezaie, Ali, Gores, Gregory J., Jones, Michael P. and Holtmann, Gerald (2025). Small intestinal bacterial overgrowth in chronic liver disease: an updated systematic review and meta-analysis of case-control studies. eClinicalMedicine, 80 103024, 1-12. doi: 10.1016/j.eclinm.2024.103024 |
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2025 Journal Article Preoperative Antibiotics and Mechanical Bowel Preparation Impact the Colonic Mucosa Associated Microbiota But Not Anastomotic Leak Rate After Colorectal ResectionHoedt, Emily C., Carroll, Georgia, Stephensen, Bree, Morrison, Mark, Vishnoi, Veral, Cuskelly, Annalisa, Draganic, Brian, McManus, Brendan, Clarke, Louise, Shah, Kalpesh, Smith, Stephen R., Talley, Nicholas J., Keely, Simon and Pockney, Peter (2025). Preoperative Antibiotics and Mechanical Bowel Preparation Impact the Colonic Mucosa Associated Microbiota But Not Anastomotic Leak Rate After Colorectal Resection. Diseases of the Colon and Rectum, 68 (7), 875-886. doi: 10.1097/DCR.0000000000003775 |
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2024 Journal Article Isolation of a Methanobrevibacter gottschalkii strain from an Eastern Gray KangarooVolmer, James G., Evans, Paul N., Soo, Rochelle M., Hugenholtz, Philip, Tyson, Gene W. and Morrison, Mark (2024). Isolation of a Methanobrevibacter gottschalkii strain from an Eastern Gray Kangaroo. Frontiers in Microbiology, 15 1483533, 1-11. doi: 10.3389/fmicb.2024.1483533 |
