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2023 Conference Publication Metagenomic characterisation of the colonic mucosa-associated microbiota reveals novel microbes and communities in health and Crohn’s disease. The ENIGMA studyKang, S., Teh, J. J., Zhang, J., Hu, J., Hamilton, A. L., Wilson-O'Brien, A., Trakman, G. L., Lin, W., Ching, J., Sung, J. J. Y., Yu, J., Ng, S. C., Kamm, M. A. and Morrison, M. (2023). Metagenomic characterisation of the colonic mucosa-associated microbiota reveals novel microbes and communities in health and Crohn’s disease. The ENIGMA study. 18th Congress of ECCO, Copenhagen, Denmark, 1-4 March 2023. Oxford, United Kingdom: Oxford University Press. doi: 10.1093/ecco-jcc/jjac190.0089 |
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2023 Conference Publication Key anti-inflammatory Faecalibacterium prausnitzii is heterogeneous and diverse in the East and West and in health and Crohn’s disease. The ENIGMA studyTeh, J. J., Kang, S., Leonard, A., Zhang, J., Hu, J., Hamilton, A. L., Wilson-O'Brien, A., Trakman, G. L., Lin, W., Ching, J., Sung, J. J. Y., Yu, J., Ng, S. C., Kamm, M. A. and Morrison, M. (2023). Key anti-inflammatory Faecalibacterium prausnitzii is heterogeneous and diverse in the East and West and in health and Crohn’s disease. The ENIGMA study. 18th Congress of ECCO, Copenhagen, Denmark, 1-4 March 2023. Oxford, United Kingdom: Oxford University Press. doi: 10.1093/ecco-jcc/jjac190.0088 |
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2023 Conference Publication Deep functional assessment of the colonic mucosa-associated microbiota in Crohn's disease and health identifies pro- and anti- inflammatory secretomes and associated bacterial consortia. The ENIGMA studyTeh, J. J., Kang, S., Zhang, J., Hu, J., Hamilton, A. L., Wilson-O'Brien, A., Trakman, G. L., Lin, W., Ching, J., Sung, J. J. Y., Yu, J., Ng, S. C., Kamm, M. A. and Morrison, M. (2023). Deep functional assessment of the colonic mucosa-associated microbiota in Crohn's disease and health identifies pro- and anti- inflammatory secretomes and associated bacterial consortia. The ENIGMA study. 18th Congress of ECCO, Copenhagen, Denmark, 1-4 March 2023. Oxford, United Kingdom: Oxford University Press. doi: 10.1093/ecco-jcc/jjac190.1055 |
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2023 Journal Article Characteristics of the gastrointestinal microbiota following prebiotic supplementation in acute kidney transplant recipients: Results from a randomised controlled trialChan, Samuel, Wood, David LA, Hawley, Carmel M., Campbell, Katrina L., Campbell, Scott B., Cao, Christopher, Francis, Ross S., Hale, Rachael, Isbel, Nicole M., Pascoe, Elaine M., Johnson, David W. and Morrison, Mark (2023). Characteristics of the gastrointestinal microbiota following prebiotic supplementation in acute kidney transplant recipients: Results from a randomised controlled trial. Clinical Transplantation, 38 (1) e15175, e15175. doi: 10.1111/ctr.15175 |
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2023 Book Chapter The importance of the microbiome in the gutMorrison, Mark, Murtaza, Nida and Talley, Nicholas J. (2023). The importance of the microbiome in the gut. Clinical understanding of the human gut microbiome. (pp. 1-11) edited by Mark Pimentel, Ruchi Mathur and Gillian M. Barlow. Cham, Switzerland: Springer Nature. doi: 10.1007/978-3-031-46712-7_1 |
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2022 Journal Article Exercise‐induced changes to the human gut microbiota and implications for colorectal cancer: A narrative reviewBoytar, Alexander N., Nitert, Marloes Dekker, Morrision, Mark, Skinner, Tina L. and Jenkins, David G. (2022). Exercise‐induced changes to the human gut microbiota and implications for colorectal cancer: A narrative review. The Journal of Physiology, 600 (24), 5189-5201. doi: 10.1113/jp283702 |
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2022 Journal Article Distinctive gut microbiomes of ankylosing spondylitis and inflammatory bowel disease patients suggest differing roles in pathogenesis and correlate with disease activitySternes, P. R., Brett, L., Phipps, J., Ciccia, F., Kenna, T., de Guzman, E., Zimmermann, K., Morrison, M., Holtmann, G., Klingberg, E., Mauro, D., McIvor, C., Forsblad-d’Elia, H. and Brown, M. A. (2022). Distinctive gut microbiomes of ankylosing spondylitis and inflammatory bowel disease patients suggest differing roles in pathogenesis and correlate with disease activity. Arthritis Research and Therapy, 24 (1) 163, 1-10. doi: 10.1186/s13075-022-02853-3 |
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2022 Journal Article Evaluation of co-circulating pathogens and microbiome from COVID-19 infectionsThissen, James B., Morrison, Michael D., Mulakken, Nisha, Nelson, William C., Daum, Chris, Messenger, Sharon, Wadford, Debra A. and Jaing, Crystal (2022). Evaluation of co-circulating pathogens and microbiome from COVID-19 infections. PLoS One, 17 (12) e0278543, 1-20. doi: 10.1371/journal.pone.0278543 |
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2022 Journal Article The duodenal mucosa associated microbiome, visceral sensory function, immune activation and psychological comorbidities in functional gastrointestinal disorders with and without self-reported non-celiac wheat sensitivityShah, Ayesha, Kang, Seungha, Talley, Nicholas J., Do, Anh, Walker, Marjorie M., Shanahan, Erin R., Koloski, Natasha A., Jones, Michael P., Keely, Simon, Morrison, Mark and Holtmann, Gerald J. (2022). The duodenal mucosa associated microbiome, visceral sensory function, immune activation and psychological comorbidities in functional gastrointestinal disorders with and without self-reported non-celiac wheat sensitivity. Gut Microbes, 14 (1) 2132078, 1-21. doi: 10.1080/19490976.2022.2132078 |
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2022 Journal Article How frequent are vancomycin-resistant enterococci in patients with primary sclerosing cholangitis and ulcerative colitis treated with oral vancomycin?Shah, Ayesha, Pakneeshan, Sahar, Jones, Michael P., Koloski, Natasha, Callaghan, Gavin, Morrison, Mark and Holtmann, Gerald (2022). How frequent are vancomycin-resistant enterococci in patients with primary sclerosing cholangitis and ulcerative colitis treated with oral vancomycin?. Indian Journal of Gastroenterology, 41 (5), 519-524. doi: 10.1007/s12664-022-01286-9 |
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2022 Journal Article Processed food as a risk factor for the development and perpetuation of Crohn’s Disease—the ENIGMA studyTrakman, Gina L., Lin, Winnie Y. Y., Hamilton, Amy L., Wilson-O’Brien, Amy L., Stanley, Annalise, Ching, Jessica Y., Yu, Jun, Mak, Joyce W. Y., Sun, Yang, Niu, Junkun, Miao, Yinglei, Lin, Xiaoqing, Feng, Rui, Chen, Minhu, Shivappa, Nitin, Hebert, James R., Morrison, Mark, Ng, Siew C. and Kamm, Michael A (2022). Processed food as a risk factor for the development and perpetuation of Crohn’s Disease—the ENIGMA study. Nutrients, 14 (17) 3627, 1-23. doi: 10.3390/nu14173627 |
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2022 Conference Publication Elevated artificial sweetener levels are associated with Crohn's disease: The ENIGMA studyHu, J., Ruan, Y., Lin, W., Trakman, G., Zhang, J., Teh, J. J., Kang, S., Hamilton, A., Wilson-O'Brien, A., Ching, J. Y. L., Sung, J. J. Y., Yu, J., Morrison, M., Kamm, M. A. and Ng, S. C. (2022). Elevated artificial sweetener levels are associated with Crohn's disease: The ENIGMA study. Gastroenterological Society of Australia (GESA) Australian Gastroenterology Week (AGW) 2022, Sydney, NSW Australia, 9–11 September 2022. Richmond, VIC Australia: John Wiley & Sons. |
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2022 Conference Publication Diversity of Veillonella in cultures of the duodenal mucosa-associated microbiota suggests species-level differences between people with and without functional gastrointestinal symptomsSchooth, L., Sid-Ahmed, A., Kang, S., Lim, Y., Fairlie, T., Shah, A., Holtmann, G. and Morrison, M. (2022). Diversity of Veillonella in cultures of the duodenal mucosa-associated microbiota suggests species-level differences between people with and without functional gastrointestinal symptoms. Gastroenterological Society of Australia (GESA) Australian Gastroenterology Week (AGW) 2022, Sydney, NSW Australia, 9–11 September 2022. Richmond, VIC Australia: John Wiley & Sons. |
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2022 Conference Publication Deep metagenomic sequencing of the colonic mucosa-associated microbiota shows novel microbes and transnational differences in health and Crohn's disease: The ENIGMA studyTeh, J. J., Kang, S., Zhang, J., Hu, J., Hamilton, A., Wilson-O'Brien, A., Ching, J. Y. L., Lin, W., Trakman, G., Sung, J., Jun, Y., Ng, S., Kamm, M. and Morrison, M. (2022). Deep metagenomic sequencing of the colonic mucosa-associated microbiota shows novel microbes and transnational differences in health and Crohn's disease: The ENIGMA study. Gastroenterological Society of Australia (GESA) Australian Gastroenterology Week (AGW) 2022, Sydney, NSW Australia, 9–11 September 2022. Richmond, VIC Australia: John Wiley & Sons. |
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2022 Conference Publication The food additive carrageenan has differential effects on the growth of the mucosa-associated microbiota from Asian and Western people with Crohn's disease and healthy controls: The ENIGMA studyKang, S., Teh, J. J., Schooth, L., Zhang, J., Hu, J., Hamilton, A. L., Wilson-O'Brien, A., Ching, J. Y. L., Lin, W., Trakman, G. L., Sung, J., Yu, J., Ng, S. C., Kamm, M. A. and Morrison, M. (2022). The food additive carrageenan has differential effects on the growth of the mucosa-associated microbiota from Asian and Western people with Crohn's disease and healthy controls: The ENIGMA study. Gastroenterological Society of Australia (GESA) Australian Gastroenterology Week (AGW) 2022, Sydney, NSW Australia, 9–11 September 2022. Richmond, VIC Australia: John Wiley & Sons. |
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2022 Journal Article Cross‐sectional and longitudinal associations between gut microbiota composition and cognition in the second year of life: findings from the Child Health and Resident Microbes studyMatsuyama, Misa, Murtaza, Nida, Morrison, Mark, Davies, Peter S. W., Hill, Rebecca J. and Loughman, Amy (2022). Cross‐sectional and longitudinal associations between gut microbiota composition and cognition in the second year of life: findings from the Child Health and Resident Microbes study. American Journal of Medical Genetics Part B: Neuropsychiatric Genetics, 189 (7-8), 285-292. doi: 10.1002/ajmg.b.32915 |
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2022 Journal Article Links between celiac disease and small intestinal bacterial overgrowth: A systematic review and meta‐analysisShah, Ayesha, Thite, Parag, Hansen, Teressa, Kendall, Bradley J., Sanders, David S., Morrison, Mark, Jones, Michael P. and Holtmann, Gerald (2022). Links between celiac disease and small intestinal bacterial overgrowth: A systematic review and meta‐analysis. Journal of Gastroenterology and Hepatology, 37 (10), 1844-1852. doi: 10.1111/jgh.15920 |
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2022 Journal Article Childhood antibiotics as a risk factor for Crohn's disease: The ENIGMA International Cohort StudyMak, Joyce W. Y., Yang, Sun, Stanley, Annalise, Lin, Xiaoqing, Morrison, Mark, Ching, Jessica Y. L., Niu, Junkun, Wilson-O'Brien, Amy L., Feng, Rui, Tang, Whitney, Hamilton, Amy L., Or, Leo, Trakman, Gina L., Lin, Winnie Y. Y., Sung, Joseph J. Y., Chen, Ming Hu, Mao, Yinglei, Kamm, Michael A. and Ng, Siew C. (2022). Childhood antibiotics as a risk factor for Crohn's disease: The ENIGMA International Cohort Study. JGH Open, 6 (6), 369-377. doi: 10.1002/jgh3.12755 |
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2022 Conference Publication Strain-level resolution of the colonic mucosa-associated microbiota reveals novel trans-ethnic differences in health and Crohn's disease. The ENIGMA studyTeh, Jing Jie, Kang, Seungha, Zhang, Jingwan, Hu, Jielun, Hamilton, Amy L., Wilson-O'Brien, Amy, Ching, Jessica Y., Lin, Winnie Y., Trakman, Gina L., Sung, Joseph, Yu, Jun, Ng, Siew C., Kamm, Michael A. and Morrison, Mark (2022). Strain-level resolution of the colonic mucosa-associated microbiota reveals novel trans-ethnic differences in health and Crohn's disease. The ENIGMA study. American Gastroenterological Association Conference 2022, Chicago, IL United States, 6-9 May 2022. Philadelphia, PA United States: Elsevier. doi: 10.1016/s0016-5085(22)62327-8 |
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2022 Conference Publication Strain-level functional and phenotypic resolution of the duodenal mucosa-associated microbiota in functional dyspepsia and healthy control subjects via a novel ex vivo combination of microbe culture and metagenomic sequencingSchooth, Lauren F., Ahmed, Ahmed Sid, Kang, Seungha, Shah, Ayesha, Fairlie, Thomas, Teh, Jing Jie, Lim, Yenkai, Hoedt, Emily C., Talley, Nicholas J., Keely, Simon, Holtmann, Gerald J. and Morrison, Mark (2022). Strain-level functional and phenotypic resolution of the duodenal mucosa-associated microbiota in functional dyspepsia and healthy control subjects via a novel ex vivo combination of microbe culture and metagenomic sequencing. American Gastroenterological Association Conference 2022, Chicago, IL United States, 6-9 May 2022. Philadelphia, PA United States: Elsevier. doi: 10.1016/s0016-5085(22)61208-3 |
