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2023

Conference Publication

A Novel Duodenal Isolate Of Streptococcus Salivarius May Contribute To Homeostatic Imbalance And Breach The Duodenal Epithelial Barrier In Functional Dyspepsia

Wark, Jasmine A., Burns, Grace L., Hoedt, Emily C., Dowling, Laura R., Soh, Wai Sinn, Sherwin, Simonne, Gottstein, Mia, Budden, Kurtis F., Kaiko, Gerard, Morrison, Mark, Keely, Simon and Talley, Nicholas J. (2023). A Novel Duodenal Isolate Of Streptococcus Salivarius May Contribute To Homeostatic Imbalance And Breach The Duodenal Epithelial Barrier In Functional Dyspepsia. Digestive Disease Week (DDW) 2023, Chicago, IL United States, 6-9 May 2023. Philadelphia, PA United States: Elsevier. doi: 10.1016/s0016-5085(23)02993-1

A Novel Duodenal Isolate Of Streptococcus Salivarius May Contribute To Homeostatic Imbalance And Breach The Duodenal Epithelial Barrier In Functional Dyspepsia

2023

Conference Publication

A NOVEL DUODENAL ISOLATE OF <i>STREPTOCOCCUS SALIVARIUS</i> MAY CONTRIBUTE TO HOMEOSTATIC IMBALANCE AND BREACH THE DUODENAL EPITHELIAL BARRIER IN FUNCTIONAL DYSPEPSIA

Wark, Jasmine A., Burns, Grace L., Hoedt, Emily C., Dowling, Laura R., Soh, Wai Sinn, Sherwin, Simonne, Gottstein, Mia, Budden, Kurtis F., Kaiko, Gerard, Morrison, Mark, Keely, Simon and Talley, Nicholas J. (2023). A NOVEL DUODENAL ISOLATE OF STREPTOCOCCUS SALIVARIUS MAY CONTRIBUTE TO HOMEOSTATIC IMBALANCE AND BREACH THE DUODENAL EPITHELIAL BARRIER IN FUNCTIONAL DYSPEPSIA. Digestive Disease Week (DDW), Chicago Il, May 06-09, 2023. PHILADELPHIA: W B SAUNDERS CO-ELSEVIER INC.

A NOVEL DUODENAL ISOLATE OF <i>STREPTOCOCCUS SALIVARIUS</i> MAY CONTRIBUTE TO HOMEOSTATIC IMBALANCE AND BREACH THE DUODENAL EPITHELIAL BARRIER IN FUNCTIONAL DYSPEPSIA

2023

Conference Publication

IMPACT OF EPIDEMIOLOGIC EVOLUTION, DIET AND EARLY LIFE PROCESSED FOOD INTAKE ON MICROBIOME VARIANCE IN CROHN'S DISEASE. THE INTERNATIONAL ENIGMA STUDY

Zhang, Jingwan, Sun, Qianru, Teh, Jing Jie, Kang, Seungha, Hu, Jielun, Lin, Winnie Y., Trakman, Gina L., Sun, Yang, Hamilton, Amy L., Brien, Amy Wilson O', Ching, Jessica Y., Miao, Yinglei, Sung, Joseph J. Y., Yu, Jun, Morrison, Mark, Kamm, Michael A. and Ng, Siew C. (2023). IMPACT OF EPIDEMIOLOGIC EVOLUTION, DIET AND EARLY LIFE PROCESSED FOOD INTAKE ON MICROBIOME VARIANCE IN CROHN'S DISEASE. THE INTERNATIONAL ENIGMA STUDY. Digestive Disease Week (DDW), Chicago Il, May 06-09, 2023. PHILADELPHIA: W B SAUNDERS CO-ELSEVIER INC.

IMPACT OF EPIDEMIOLOGIC EVOLUTION, DIET AND EARLY LIFE PROCESSED FOOD INTAKE ON MICROBIOME VARIANCE IN CROHN'S DISEASE. THE INTERNATIONAL ENIGMA STUDY

2023

Conference Publication

Characterization Of The Key Anti-inflammatory Bacterium Faecalibacterium Prausnitzii Internationally In Health And Crohn's Disease. The Enigma Study

Teh, Jing Jie, Kang, Seungha, Leonard, Alarna, Zhang, Jingwan, Hu, Jielun, Hamilton, Amy L., Wilson-O'Brien, Amy, Trakman, Gina L., Lin, Winnie Y., Ching, Jessica Y., Sung, Joseph JY, Yu, Jun, Ng, Siew C., Kamm, Michael A. and Morrison, Mark (2023). Characterization Of The Key Anti-inflammatory Bacterium Faecalibacterium Prausnitzii Internationally In Health And Crohn's Disease. The Enigma Study. Digestive Disease Week (DDW) 2023, Chicago, IL United States, 6-9 May 2023. Philadelphia, PA United States: Elsevier. doi: 10.1016/s0016-5085(23)03121-9

Characterization Of The Key Anti-inflammatory Bacterium Faecalibacterium Prausnitzii Internationally In Health And Crohn's Disease. The Enigma Study

2023

Journal Article

Small intestinal bacterial overgrowth complicating gastrointestinal manifestations of systemic sclerosis: a systematic review and meta-analysis

Shah, Ayesha, Pakeerathan, Veenaa, Jones, Michael P., Kashyap, Purna C., Virgo, Kate, Fairlie, Thomas, Morrison, Mark, Ghoshal, Uday C. and Holtmann, Gerald J. (2023). Small intestinal bacterial overgrowth complicating gastrointestinal manifestations of systemic sclerosis: a systematic review and meta-analysis. Journal of Neurogastroenterology and Motility, 29 (2), 132-144. doi: 10.5056/jnm22168

Small intestinal bacterial overgrowth complicating gastrointestinal manifestations of systemic sclerosis: a systematic review and meta-analysis

2023

Conference Publication

The interplay of IL-23, probiotic and pathobiont bacteria in the pathogenesis of ileitis and spondyloarthritis in the SKG mouse model

Bergot, Anne-Sophie, Cai, Benjamin, Giri, Rabina, Cameron, Amy, Duggan, Emily, Lim, Kai, Rehaume, Linda, Morrison, Mark, Begun, Jakob and Thomas, Ranjeny (2023). The interplay of IL-23, probiotic and pathobiont bacteria in the pathogenesis of ileitis and spondyloarthritis in the SKG mouse model. 2023 Australian Rheumatology Association (ARA) 63rd Annual Scientific Meeting, Hobart, TAS, Australia, 6–9 May 2023. Hoboken, NJ, United States: Wiley.

The interplay of IL-23, probiotic and pathobiont bacteria in the pathogenesis of ileitis and spondyloarthritis in the SKG mouse model

2023

Journal Article

Isolation and characterisation of novel Methanocorpusculum species indicates the genus is ancestrally host-associated

Volmer, James G., Soo, Rochelle M., Evans, Paul N., Hoedt, Emily C., Astorga Alsina, Ana L., Woodcroft, Benjamin J., Tyson, Gene W., Hugenholtz, Philip and Morrison, Mark (2023). Isolation and characterisation of novel Methanocorpusculum species indicates the genus is ancestrally host-associated. BMC Biology, 21 (1) 59, 1-17. doi: 10.1186/s12915-023-01524-2

Isolation and characterisation of novel Methanocorpusculum species indicates the genus is ancestrally host-associated

2023

Journal Article

Maternal diet modulates the infant microbiome and intestinal Flt3L necessary for dendritic cell development and immunity to respiratory infection

Sikder, Md. Al Amin, Rashid, Ridwan B., Ahmed, Tufael, Sebina, Ismail, Howard, Daniel R., Ullah, Md. Ashik, Rahman, Muhammed Mahfuzur, Lynch, Jason P., Curren, Bodie, Werder, Rhiannon B., Simpson, Jennifer, Bissell, Alec, Morrison, Mark, Walpole, Carina, Radford, Kristen J., Kumar, Vinod, Woodruff, Trent M., Ying, Tan Hui, Ali, Ayesha, Kaiko, Gerard E., Upham, John W., Hoelzle, Robert D., Cuív, Páraic Ó., Holt, Patrick G., Dennis, Paul G. and Phipps, Simon (2023). Maternal diet modulates the infant microbiome and intestinal Flt3L necessary for dendritic cell development and immunity to respiratory infection. Immunity, 56 (5), 1098-1114.e10. doi: 10.1016/j.immuni.2023.03.002

Maternal diet modulates the infant microbiome and intestinal Flt3L necessary for dendritic cell development and immunity to respiratory infection

2023

Journal Article

Effect of food additives on key bacterial taxa and the mucosa-associated microbiota in Crohn’s disease. The ENIGMA study

Loayza, J.J. Jimenez, Kang, S., Schooth, L., Teh, J. J., de Klerk, A., Noon, E. K., Zhang, J., Hu, J., Hamilton, A. L., Wilson-O’Brien, A., Trakman, G. L., Lin, W., Ching, J., Or, L., Sung, J.J.Y., Yu, J., Ng, S.C., Kamm, M.A. and Morrison, M. (2023). Effect of food additives on key bacterial taxa and the mucosa-associated microbiota in Crohn’s disease. The ENIGMA study. Gut Microbes, 15 (1) 2172670, 1-18. doi: 10.1080/19490976.2023.2172670

Effect of food additives on key bacterial taxa and the mucosa-associated microbiota in Crohn’s disease. The ENIGMA study

2023

Conference Publication

Metagenomic characterisation of the colonic mucosa-associated microbiota reveals novel microbes and communities in health and Crohn’s disease. The ENIGMA study

Kang, S., Teh, J. J., Zhang, J., Hu, J., Hamilton, A. L., Wilson-O'Brien, A., Trakman, G. L., Lin, W., Ching, J., Sung, J. J. Y., Yu, J., Ng, S. C., Kamm, M. A. and Morrison, M. (2023). Metagenomic characterisation of the colonic mucosa-associated microbiota reveals novel microbes and communities in health and Crohn’s disease. The ENIGMA study. 18th Congress of ECCO, Copenhagen, Denmark, 1-4 March 2023. Oxford, United Kingdom: Oxford University Press. doi: 10.1093/ecco-jcc/jjac190.0089

Metagenomic characterisation of the colonic mucosa-associated microbiota reveals novel microbes and communities in health and Crohn’s disease. The ENIGMA study

2023

Conference Publication

Key anti-inflammatory Faecalibacterium prausnitzii is heterogeneous and diverse in the East and West and in health and Crohn’s disease. The ENIGMA study

Teh, J. J., Kang, S., Leonard, A., Zhang, J., Hu, J., Hamilton, A. L., Wilson-O'Brien, A., Trakman, G. L., Lin, W., Ching, J., Sung, J. J. Y., Yu, J., Ng, S. C., Kamm, M. A. and Morrison, M. (2023). Key anti-inflammatory Faecalibacterium prausnitzii is heterogeneous and diverse in the East and West and in health and Crohn’s disease. The ENIGMA study. 18th Congress of ECCO, Copenhagen, Denmark, 1-4 March 2023. Oxford, United Kingdom: Oxford University Press. doi: 10.1093/ecco-jcc/jjac190.0088

Key anti-inflammatory Faecalibacterium prausnitzii is heterogeneous and diverse in the East and West and in health and Crohn’s disease. The ENIGMA study

2023

Conference Publication

Deep functional assessment of the colonic mucosa-associated microbiota in Crohn's disease and health identifies pro- and anti- inflammatory secretomes and associated bacterial consortia. The ENIGMA study

Teh, J. J., Kang, S., Zhang, J., Hu, J., Hamilton, A. L., Wilson-O'Brien, A., Trakman, G. L., Lin, W., Ching, J., Sung, J. J. Y., Yu, J., Ng, S. C., Kamm, M. A. and Morrison, M. (2023). Deep functional assessment of the colonic mucosa-associated microbiota in Crohn's disease and health identifies pro- and anti- inflammatory secretomes and associated bacterial consortia. The ENIGMA study. 18th Congress of ECCO, Copenhagen, Denmark, 1-4 March 2023. Oxford, United Kingdom: Oxford University Press. doi: 10.1093/ecco-jcc/jjac190.1055

Deep functional assessment of the colonic mucosa-associated microbiota in Crohn's disease and health identifies pro- and anti- inflammatory secretomes and associated bacterial consortia. The ENIGMA study

2023

Journal Article

Characteristics of the gastrointestinal microbiota following prebiotic supplementation in acute kidney transplant recipients: results from a randomised controlled trial

Chan, Samuel, Wood, David L. A., Hawley, Carmel M., Campbell, Katrina L., Campbell, Scott B., Cao, Christopher, Francis, Ross S., Hale, Rachael, Isbel, Nicole M., Pascoe, Elaine M., Johnson, David W. and Morrison, Mark (2023). Characteristics of the gastrointestinal microbiota following prebiotic supplementation in acute kidney transplant recipients: results from a randomised controlled trial. Clinical Transplantation, 38 (1) e15175, 1-4. doi: 10.1111/ctr.15175

Characteristics of the gastrointestinal microbiota following prebiotic supplementation in acute kidney transplant recipients: results from a randomised controlled trial

2023

Book Chapter

The importance of the microbiome in the gut

Morrison, Mark, Murtaza, Nida and Talley, Nicholas J. (2023). The importance of the microbiome in the gut. Clinical understanding of the human gut microbiome. (pp. 1-11) edited by Mark Pimentel, Ruchi Mathur and Gillian M. Barlow. Cham, Switzerland: Springer Nature. doi: 10.1007/978-3-031-46712-7_1

The importance of the microbiome in the gut

2022

Journal Article

Exercise‐induced changes to the human gut microbiota and implications for colorectal cancer: A narrative review

Boytar, Alexander N., Nitert, Marloes Dekker, Morrision, Mark, Skinner, Tina L. and Jenkins, David G. (2022). Exercise‐induced changes to the human gut microbiota and implications for colorectal cancer: A narrative review. The Journal of Physiology, 600 (24), 5189-5201. doi: 10.1113/jp283702

Exercise‐induced changes to the human gut microbiota and implications for colorectal cancer: A narrative review

2022

Journal Article

Distinctive gut microbiomes of ankylosing spondylitis and inflammatory bowel disease patients suggest differing roles in pathogenesis and correlate with disease activity

Sternes, P. R., Brett, L., Phipps, J., Ciccia, F., Kenna, T., de Guzman, E., Zimmermann, K., Morrison, M., Holtmann, G., Klingberg, E., Mauro, D., McIvor, C., Forsblad-d’Elia, H. and Brown, M. A. (2022). Distinctive gut microbiomes of ankylosing spondylitis and inflammatory bowel disease patients suggest differing roles in pathogenesis and correlate with disease activity. Arthritis Research and Therapy, 24 (1) 163, 1-10. doi: 10.1186/s13075-022-02853-3

Distinctive gut microbiomes of ankylosing spondylitis and inflammatory bowel disease patients suggest differing roles in pathogenesis and correlate with disease activity

2022

Journal Article

Evaluation of co-circulating pathogens and microbiome from COVID-19 infections

Thissen, James B., Morrison, Michael D., Mulakken, Nisha, Nelson, William C., Daum, Chris, Messenger, Sharon, Wadford, Debra A. and Jaing, Crystal (2022). Evaluation of co-circulating pathogens and microbiome from COVID-19 infections. PLoS One, 17 (12) e0278543, 1-20. doi: 10.1371/journal.pone.0278543

Evaluation of co-circulating pathogens and microbiome from COVID-19 infections

2022

Journal Article

The duodenal mucosa associated microbiome, visceral sensory function, immune activation and psychological comorbidities in functional gastrointestinal disorders with and without self-reported non-celiac wheat sensitivity

Shah, Ayesha, Kang, Seungha, Talley, Nicholas J., Do, Anh, Walker, Marjorie M., Shanahan, Erin R., Koloski, Natasha A., Jones, Michael P., Keely, Simon, Morrison, Mark and Holtmann, Gerald J. (2022). The duodenal mucosa associated microbiome, visceral sensory function, immune activation and psychological comorbidities in functional gastrointestinal disorders with and without self-reported non-celiac wheat sensitivity. Gut Microbes, 14 (1) 2132078, 1-21. doi: 10.1080/19490976.2022.2132078

The duodenal mucosa associated microbiome, visceral sensory function, immune activation and psychological comorbidities in functional gastrointestinal disorders with and without self-reported non-celiac wheat sensitivity

2022

Journal Article

How frequent are vancomycin-resistant enterococci in patients with primary sclerosing cholangitis and ulcerative colitis treated with oral vancomycin?

Shah, Ayesha, Pakneeshan, Sahar, Jones, Michael P., Koloski, Natasha, Callaghan, Gavin, Morrison, Mark and Holtmann, Gerald (2022). How frequent are vancomycin-resistant enterococci in patients with primary sclerosing cholangitis and ulcerative colitis treated with oral vancomycin?. Indian Journal of Gastroenterology, 41 (5), 519-524. doi: 10.1007/s12664-022-01286-9

How frequent are vancomycin-resistant enterococci in patients with primary sclerosing cholangitis and ulcerative colitis treated with oral vancomycin?

2022

Journal Article

Processed food as a risk factor for the development and perpetuation of Crohn’s Disease—the ENIGMA study

Trakman, Gina L., Lin, Winnie Y. Y., Hamilton, Amy L., Wilson-O’Brien, Amy L., Stanley, Annalise, Ching, Jessica Y., Yu, Jun, Mak, Joyce W. Y., Sun, Yang, Niu, Junkun, Miao, Yinglei, Lin, Xiaoqing, Feng, Rui, Chen, Minhu, Shivappa, Nitin, Hebert, James R., Morrison, Mark, Ng, Siew C. and Kamm, Michael A (2022). Processed food as a risk factor for the development and perpetuation of Crohn’s Disease—the ENIGMA study. Nutrients, 14 (17) 3627, 1-23. doi: 10.3390/nu14173627

Processed food as a risk factor for the development and perpetuation of Crohn’s Disease—the ENIGMA study