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2020

Conference Publication

Microbiota and viruence factors associated with Crohn's Disease recurrence revealed at strain-level resolution by novel combination of microbe culture and metagenomic sequencing (mc-mgs). The Enigma Study

Teh, Jing Jie, Kang, Seungha, Murtaza, Nida, Zhang, Jingwan, Zhang, Fen, Liu, Qin, Hamilton, Amy L., Wilson-O'Brien, Amy, Ching, Jessica Y., Sung, Joseph J., Yu, Jun, Ng, Siew C., Kamm, Michael A. and Morrison, Mark (2020). Microbiota and viruence factors associated with Crohn's Disease recurrence revealed at strain-level resolution by novel combination of microbe culture and metagenomic sequencing (mc-mgs). The Enigma Study. AGA 2020, Online, 2020. Philadelphia, PA United States: Elsevier . doi: 10.1016/s0016-5085(20)33265-0

Microbiota and viruence factors associated with Crohn's Disease recurrence revealed at strain-level resolution by novel combination of microbe culture and metagenomic sequencing (mc-mgs). The Enigma Study

2020

Conference Publication

Self-reported non-celiac wheat sensitivity in patients with chronic unexplained (functional) gastrointestinal symptoms: gut function, immune activation and duodenal mucosa associated microbiome

Shah, Ayesha, Talley, Nicholas J., Kang, Seungha, Do, Anh, Walker, Marjorie M., Shanahan, Erin R., Koloski, Natasha A., Jones, Michael P., Keely, Simon, Morrison, Mark and Holtmann, Gerald J. (2020). Self-reported non-celiac wheat sensitivity in patients with chronic unexplained (functional) gastrointestinal symptoms: gut function, immune activation and duodenal mucosa associated microbiome. AGA 2020, Online, 2020. Philadelphia, PA United States: Elsevier . doi: 10.1016/s0016-5085(20)31900-4

Self-reported non-celiac wheat sensitivity in patients with chronic unexplained (functional) gastrointestinal symptoms: gut function, immune activation and duodenal mucosa associated microbiome

2020

Conference Publication

Quantitative PCR as a novel approach to determine small intestinal bacterial load in health and disease

Shah, Ayesha, Talley, Nicholas J., Koloski, Natasha A., Macdonald, Graeme A., Kendall, Bradley J., Shanahan, Erin R., Walker, Marjorie M., Jones, Michael P., Morrison, Mark and Holtmann, Gerald J. (2020). Quantitative PCR as a novel approach to determine small intestinal bacterial load in health and disease. Crohn's and Colitis Congress, Austin, TX United States, 23-25 January 2020. Philadelphia, PA United States: Elsevier.

Quantitative PCR as a novel approach to determine small intestinal bacterial load in health and disease

2020

Conference Publication

Polyols are a key driver of the bifidobacteria niche expansion and reduced bacterial richness observed with a moderate intake of food-borne prebiotics by healthy Australian subjects

Murtaza, Nida, Collins, Lyndal S., Krause, Lutz, Muir, Jane, Gibson, Peter R. and Morrison, Mark (2020). Polyols are a key driver of the bifidobacteria niche expansion and reduced bacterial richness observed with a moderate intake of food-borne prebiotics by healthy Australian subjects. Crohn's and Colitis Congress, Austin, TX USA, 23-25 January 2020. Philadelphia, PA USA: Elsevier.

Polyols are a key driver of the bifidobacteria niche expansion and reduced bacterial richness observed with a moderate intake of food-borne prebiotics by healthy Australian subjects

2020

Journal Article

Bile acids associate with specific gut microbiota, low-level alcohol consumption and liver fibrosis in patients with non-alcoholic fatty liver disease

Adams, Leon A., Wang, Zhengyi, Liddle, Chris, Melton, Phillip E., Ariff, Amir, Chandraratna, Harsha, Tan, Jeremy, Ching, Helena, Coulter, Sally, de Boer, Bastiaan, Christophersen, Claus T., O'Sullivan, Therese A., Morrison, Mark and Jeffrey, Gary P. (2020). Bile acids associate with specific gut microbiota, low-level alcohol consumption and liver fibrosis in patients with non-alcoholic fatty liver disease. Liver International, 40 (6) liv.14453, 1356-1365. doi: 10.1111/liv.14453

Bile acids associate with specific gut microbiota, low-level alcohol consumption and liver fibrosis in patients with non-alcoholic fatty liver disease

2020

Journal Article

Development and validation of surveys to estimate food additive intake

Trakman, Gina L., Lin, Winnie, Wilson-O'Brien, Amy L., Stanley, Annalise, Hamilton, Amy L., Tang, Whitney, Or, Leo, Ching, Jessica, Morrison, Mark, Yu, Jun, Ng, Siew C. and Kamm, Michael A. (2020). Development and validation of surveys to estimate food additive intake. Nutrients, 12 (3) 812, 812. doi: 10.3390/nu12030812

Development and validation of surveys to estimate food additive intake

2020

Conference Publication

Quantitative PCR as a novel approach to determine small intestinal bacterial load in health and disease

Shah, Ayesha, Talley, Nicholas, Koloski, Natasha, Shanahan, Erin, Walker, Marjorie, Keely, Simon, Jones, Michael, Morrison, Mark and Holtmann, Gerald (2020). Quantitative PCR as a novel approach to determine small intestinal bacterial load in health and disease. Meeting of the Federation of Neurogastroenterology and Motility, Adelaide, Australia, 25 – 28 March 2020. Chichester, West Sussex, United Kingdom: Wiley-Blackwell.

Quantitative PCR as a novel approach to determine small intestinal bacterial load in health and disease

2020

Journal Article

Helminths, polyparasitism, and the gut microbiome in the Philippines

Gordon, Catherine A., Krause, Lutz, McManus, Donald P., Morrison, Mark, Weerakoon, Kosala G., Connor, Mairead C., Olveda, Remigio M., Ross, Allen G. and Gobert, Geoffrey N. (2020). Helminths, polyparasitism, and the gut microbiome in the Philippines. International Journal for Parasitology, 50 (3), 217-225. doi: 10.1016/j.ijpara.2019.12.008

Helminths, polyparasitism, and the gut microbiome in the Philippines

2020

Journal Article

Small intestinal bacterial overgrowth in irritable bowel syndrome: a systematic review and meta-analysis of case-control studies

Shah, Ayesha, Talley, Nicholas J., Jones, Michael, Kendall, Bradley, Koloski, Natasha, Walker, Marjorie, Morrison, Mark and Holtmann, Gerald J. (2020). Small intestinal bacterial overgrowth in irritable bowel syndrome: a systematic review and meta-analysis of case-control studies. American Journal of Gastroenterology, 115 (2), 190-201. doi: 10.14309/ajg.0000000000000504

Small intestinal bacterial overgrowth in irritable bowel syndrome: a systematic review and meta-analysis of case-control studies

2020

Conference Publication

Investigating the role of bioactives produced by gut bacteria to modulate immune response in inflammatory bowel disease

Giri, R., Shamsunnahar, K., Salim, A., Capon, R., Morrison, M., Cuiv, P. O. and Begun, J. (2020). Investigating the role of bioactives produced by gut bacteria to modulate immune response in inflammatory bowel disease. 15th Congress of ECCO, Vienna, Austria, 12-15 February 2020. Oxford, United Kingdom: Oxford University Press. doi: 10.1093/ecco-jcc/jjz203.035

Investigating the role of bioactives produced by gut bacteria to modulate immune response in inflammatory bowel disease

2020

Journal Article

Secretome components from Faecalibacterium prausnitzii strains A2-165 and AHMP21 modulate cutaneous wound inflammation

Stefia, Laurancia Vina, Lee, James, Patel, Jatin, de Sousa, Silmara Rodrigues, Legrand, Julien, Rodero, Mathieu, Burman, Sriti, Linedale, Richard, Morrison, Mark and Khosrotehrani, Kiarash (2020). Secretome components from Faecalibacterium prausnitzii strains A2-165 and AHMP21 modulate cutaneous wound inflammation. Journal of Investigative Dermatology, 140 (11), 2312-2315.e6. doi: 10.1016/j.jid.2020.02.027

Secretome components from Faecalibacterium prausnitzii strains A2-165 and AHMP21 modulate cutaneous wound inflammation

2020

Journal Article

Shotgun metagenomics reveals an enrichment of potentially cross-reactive bacterial epitopes in ankylosing spondylitis patients, as well as the effects of TNFi therapy upon microbiome composition

Yin, Jian, Sternes, Peter Richard, Wang, Mingbang, Song, Jing, Morrison, Mark, Li, Ting, Zhou, Ling, Wu, Xin, He, Fusheng, Zhu, Jian, Brown, Matthew A and Xu, Huji (2020). Shotgun metagenomics reveals an enrichment of potentially cross-reactive bacterial epitopes in ankylosing spondylitis patients, as well as the effects of TNFi therapy upon microbiome composition. Annals of the Rheumatic Diseases, 79 (1) 215763, 132-140. doi: 10.1136/annrheumdis-2019-215763

Shotgun metagenomics reveals an enrichment of potentially cross-reactive bacterial epitopes in ankylosing spondylitis patients, as well as the effects of TNFi therapy upon microbiome composition

2020

Conference Publication

Self-reported non-celiac wheat sensitivity (NCWS) in patients with chronic unexplained (functional) gastrointestinal symptoms

Shah, Ayesha, Talley, Nicholas, Kang, Seungha, Do, Anh, Walker, Marjorie, Koloski, Natasha, Jones, Michael, Keely, Simon, Morrison, Mark and Holtmann, Gerald (2020). Self-reported non-celiac wheat sensitivity (NCWS) in patients with chronic unexplained (functional) gastrointestinal symptoms. Meeting of the Federation of Neurogastroenterology and Motility, Adelaide, SA Australia, 25 – 28 March 2020. Chichester, West Sussex United Kingdom: Wiley-Blackwell.

Self-reported non-celiac wheat sensitivity (NCWS) in patients with chronic unexplained (functional) gastrointestinal symptoms

2020

Journal Article

Duodenal bacterial load as determined by quantitative polymerase chain reaction in asymptomatic controls, functional gastrointestinal disorders and inflammatory bowel disease

Shah, Ayesha, Talley, Nicholas J., Koloski, Natasha, Macdonald, Graeme A., Kendall, Bradley J., Shanahan, Erin R., Walker, Marjorie M., Keely, Simon, Jones, Michael P., Morrison, Mark and Holtmann, Gerald J. (2020). Duodenal bacterial load as determined by quantitative polymerase chain reaction in asymptomatic controls, functional gastrointestinal disorders and inflammatory bowel disease. Alimentary Pharmacology and Therapeutics, 52 (1), 155-167. doi: 10.1111/apt.15786

Duodenal bacterial load as determined by quantitative polymerase chain reaction in asymptomatic controls, functional gastrointestinal disorders and inflammatory bowel disease

2020

Conference Publication

Variations of the mucosa associated microbiota along the human gastrointestinal tract in health and inflammatory bowel disease

Shah, Ayesha, Kang, Seungha, Tyson, Gene, Zaugg, Julian, Hugenholtz, Phil, Morrison, Mark and Holtmann, Gerald J. (2020). Variations of the mucosa associated microbiota along the human gastrointestinal tract in health and inflammatory bowel disease. Crohn's and Colitis Congress, Austin, TX, United States, 23-25 January 2020. Philadelphia, PA United States: Elsevier. doi: 10.1016/s0016-5085(20)32052-7

Variations of the mucosa associated microbiota along the human gastrointestinal tract in health and inflammatory bowel disease

2020

Journal Article

High amylose wheat starch structures display unique fermentability characteristics, microbial community shifts and enzyme degradation profiles

Bui, Alexander T., Williams, Barbara A., Hoedt, Emily C., Morrison, Mark, Mikkelsen, Deirdre and Gidley, Michael J. (2020). High amylose wheat starch structures display unique fermentability characteristics, microbial community shifts and enzyme degradation profiles. Food and Function, 11 (6), 5635-5646. doi: 10.1039/d0fo00198h

High amylose wheat starch structures display unique fermentability characteristics, microbial community shifts and enzyme degradation profiles

2019

Journal Article

Microbiota and body composition during the period of complementary feeding

Smith-Brown, Paula, Morrison, Mark, Krause, Lutz and Davies, Peter S. W. (2019). Microbiota and body composition during the period of complementary feeding. Journal of Pediatric Gastroenterology and Nutrition, 69 (6), 726-732. doi: 10.1097/MPG.0000000000002490

Microbiota and body composition during the period of complementary feeding

2019

Journal Article

Transplant associated infections, – the role of the gastrointestinal microbiota and potential therapeutic options

Chan, Samuel, Hawley, Carmel M., Campbell, Katrina L., Morrison, Mark, Campbell, Scott B., Isbel, Nicole M., Francis, Ross S., Playford, E. Geoffrey and Johnson, David W. (2019). Transplant associated infections, – the role of the gastrointestinal microbiota and potential therapeutic options. Nephrology, 25 (1) nep.13670, 5-13. doi: 10.1111/nep.13670

Transplant associated infections, – the role of the gastrointestinal microbiota and potential therapeutic options

2019

Journal Article

Infectious complications following kidney transplantation-A focus on hepatitis C infection, cytomegalovirus infection and novel developments in the gut microbiota

Chan, Samuel, Isbel, Nicole M., Hawley, Carmel M., Campbell, Scott B., Campbell, Katrina L., Morrison, Mark, Francis, Ross S., Playford, E Geoffrey and Johnson, David W. (2019). Infectious complications following kidney transplantation-A focus on hepatitis C infection, cytomegalovirus infection and novel developments in the gut microbiota. Medicina, 55 (10) 672, 672. doi: 10.3390/medicina55100672

Infectious complications following kidney transplantation-A focus on hepatitis C infection, cytomegalovirus infection and novel developments in the gut microbiota

2019

Conference Publication

2125. Staphylococcus Species Identification by Fourier Transform Infrared (FTIR) Spectroscopic Techniques: A Cross-Lab Study

Tsutsumi, Tamao, Shah, Alok, Lam, Lisa M T, Schlebusch, Sanmarie, Krueger, Annika, Frazer, Ian, Hugenholtz, Phil, Soyer, H Peter, Morrison, Mark, Hill, Michelle, Sedman, Jacqueline and Ismail, Ashraf (2019). 2125. Staphylococcus Species Identification by Fourier Transform Infrared (FTIR) Spectroscopic Techniques: A Cross-Lab Study. IDWeek 2019, Washington, DC, United States, 2-6 October 2019. Oxford, United Kingdom: Oxford University Press. doi: 10.1093/ofid/ofz360.1805

2125. Staphylococcus Species Identification by Fourier Transform Infrared (FTIR) Spectroscopic Techniques: A Cross-Lab Study