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2018

Journal Article

A natural history of actinic keratosis and cutaneous squamous cell carcinoma microbiomes

Wood, David L. A., Lachner, Nancy, Tan, Jean-Marie, Tang, Stephanie, Angel, Nicola, Laino, Antonia, Linedale, Richard, Lê Cao, Kim-Anh, Morrison, Mark, Frazer, Ian H., Soyer, H. Peter and Hugenholtz, Philip (2018). A natural history of actinic keratosis and cutaneous squamous cell carcinoma microbiomes. MBio, 9 (5) e01432-18. doi: 10.1128/mBio.01432-18

A natural history of actinic keratosis and cutaneous squamous cell carcinoma microbiomes

2018

Journal Article

A novel treatment for patients with constipation: dawn of a new age for translational microbiome research?

Shah, Ayesha, Morrison, Mark and Holtmann, Gerald (2018). A novel treatment for patients with constipation: dawn of a new age for translational microbiome research?. Indian Journal of Gastroenterology, 37 (5), 388-391. doi: 10.1007/s12664-018-0912-3

A novel treatment for patients with constipation: dawn of a new age for translational microbiome research?

2018

Journal Article

Influence of cigarette smoking on the human duodenal mucosa-associated microbiota

Shanahan, Erin R., Shah, Ayesha, Koloski, Natasha, Walker, Marjorie M., Talley, Nicholas J., Morrison, Mark and Holtmann, Gerald J. (2018). Influence of cigarette smoking on the human duodenal mucosa-associated microbiota. Microbiome, 6 (1) 150, 150. doi: 10.1186/s40168-018-0531-3

Influence of cigarette smoking on the human duodenal mucosa-associated microbiota

2018

Journal Article

The performance of an oral microbiome biomarker panel in predicting oral cavity and oropharyngeal cancers

Lim, Yenkai, Fukuma, Naoki, Totsika, Makrina, Kenny, Liz, Morrison, Mark and Punyadeera, Chamindie (2018). The performance of an oral microbiome biomarker panel in predicting oral cavity and oropharyngeal cancers. Frontiers in Cellular and Infection Microbiology, 8 (AUG) 267, 267. doi: 10.3389/fcimb.2018.00267

The performance of an oral microbiome biomarker panel in predicting oral cavity and oropharyngeal cancers

2018

Journal Article

Culture- and metagenomics-enabled analyses of the Methanosphaera genus reveals their monophyletic origin and differentiation according to genome size

Hoedt, Emily C., Parks, Donovan H., Volmer, James G., Rosewarne, Carly P., Denman, Stuart E., McSweeney, Christopher S., Muir, Jane G., Gibson, Peter R., Cuív, Páraic Ó, Hugenholtz, Philip, Tyson, Gene W. and Morrison, Mark (2018). Culture- and metagenomics-enabled analyses of the Methanosphaera genus reveals their monophyletic origin and differentiation according to genome size. ISME Journal, 12 (12), 2942-2953. doi: 10.1038/s41396-018-0225-7

Culture- and metagenomics-enabled analyses of the Methanosphaera genus reveals their monophyletic origin and differentiation according to genome size

2018

Journal Article

A vegetarian diet is a major determinant of gut microbiota composition in early pregnancy

Barrett, Helen L., Gomez-Arango, Luisa F., Wilkinson, Shelley A., McIntyre, H. David, Callaway, Leonie K., Morrison, Mark and Dekker Nitert, Marloes (2018). A vegetarian diet is a major determinant of gut microbiota composition in early pregnancy. Nutrients, 10 (7) 890, 890. doi: 10.3390/nu10070890

A vegetarian diet is a major determinant of gut microbiota composition in early pregnancy

2018

Journal Article

Proteus spp. as putative gastrointestinal pathogens

Hamilton, Amy L., Kamm, Michael A., Ng, Siew C. and Morrison, Mark (2018). Proteus spp. as putative gastrointestinal pathogens. Clinical Microbiology Reviews, 31 (3) e00085-17. doi: 10.1128/CMR.00085-17

Proteus spp. as putative gastrointestinal pathogens

2018

Journal Article

Growth and protein-rich food intake in infancy is associated with fat-free mass index at 2-3 years of age

Smith-Brown, Paula, Morrison, Mark, Krause, Lutz, Newby, Ruth and Davies, Peter Sw (2018). Growth and protein-rich food intake in infancy is associated with fat-free mass index at 2-3 years of age. Journal of Paediatrics and Child Health, 54 (7), 770-775. doi: 10.1111/jpc.13863

Growth and protein-rich food intake in infancy is associated with fat-free mass index at 2-3 years of age

2018

Journal Article

Dietary fiber intervention on gut microbiota composition in healthy adults: a systematic review and meta-analysis

So, Daniel, Whelan, Kevin, Rossi, Megan, Morrison, Mark, Holtmann, Gerald, Kelly, Jaimon T., Shanahan, Erin R., Staudacher, Heidi M. and Campbell, Katrina L. (2018). Dietary fiber intervention on gut microbiota composition in healthy adults: a systematic review and meta-analysis. The American Journal of Clinical Nutrition, 107 (6), 965-983. doi: 10.1093/ajcn/nqy041

Dietary fiber intervention on gut microbiota composition in healthy adults: a systematic review and meta-analysis

2018

Journal Article

Food starch structure impacts gut microbiome composition

Warren, Frederick J., Fukuma, Naoki M., Mikkelsen, Deirdre, Flanagan, Bernadine M., Williams, Barbara A., Lisle, Allan T., Ó Cuív, Páraic, Morrison, Mark and Gidley, Michael J. (2018). Food starch structure impacts gut microbiome composition. mSphere, 3 (3) e00086-18. doi: 10.1128/mSphere.00086-18

Food starch structure impacts gut microbiome composition

2018

Journal Article

Enterococcus faecalis AHG0090 is a genetically tractable bacterium and produces a secreted peptidic bioactive that suppresses nuclear factor Kappa B activation in human gut epithelial cells

Ó Cuív, Páraic, Giri, Rabina, Hoedt, Emily C., McGuckin, Michael A., Begun, Jakob and Morrison, Mark (2018). Enterococcus faecalis AHG0090 is a genetically tractable bacterium and produces a secreted peptidic bioactive that suppresses nuclear factor Kappa B activation in human gut epithelial cells. Frontiers in Immunology, 9 (April) 790, 790. doi: 10.3389/fimmu.2018.00790

Enterococcus faecalis AHG0090 is a genetically tractable bacterium and produces a secreted peptidic bioactive that suppresses nuclear factor Kappa B activation in human gut epithelial cells

2018

Journal Article

Pathophysiology of Functional Gastrointestinal Disorders: A Holistic Overview

Holtmann, Gerald, Shah, Ayesha and Morrison, Mark (2018). Pathophysiology of Functional Gastrointestinal Disorders: A Holistic Overview. Digestive Diseases (Basel, Switzerland), 35 (1), 5-13. doi: 10.1159/000485409

Pathophysiology of Functional Gastrointestinal Disorders: A Holistic Overview

2018

Journal Article

Male-specific association between fat-free mass index and fecal microbiota in 2- to 3-year-old Australian children

Smith-Brown, Paula, Morrison, Mark, Krause, Lutz and Davies, Peter S. W. (2018). Male-specific association between fat-free mass index and fecal microbiota in 2- to 3-year-old Australian children. Journal of Pediatric Gastroenterology and Nutrition, 66 (1), 147-151. doi: 10.1097/MPG.0000000000001780

Male-specific association between fat-free mass index and fecal microbiota in 2- to 3-year-old Australian children

2017

Journal Article

Plasmacytoid dendritic cells protect from viral bronchiolitis and asthma through semaphorin 4a-mediated T reg expansion

Lynch, Jason P., Werder, Rhiannon B., Loh, Zhixuan, Sikder, Md Al Amin, Curren, Bodie, Zhang, Vivian, Rogers, Matthew J. , Lane, Katie, Simpson, Jennifer, Mazzone, Stuart B., Spann, Kirsten, Hayball, John, Diener, Kerrilyn, Everard, Mark L., Blyth, Christopher C., Forstner, Christian, Dennis, Paul G., Murtaza, Nida, Morrison, Mark, Ó Cuív, Páraic, Zhang, Ping, Haque, Ashraful, Hill, Geoffrey R., Sly, Peter D., Upham, John W. and Phipps, Simon (2017). Plasmacytoid dendritic cells protect from viral bronchiolitis and asthma through semaphorin 4a-mediated T reg expansion. The Journal of Experimental Medicine, 215 (2), 537-557. doi: 10.1084/jem.20170298

Plasmacytoid dendritic cells protect from viral bronchiolitis and asthma through semaphorin 4a-mediated T reg expansion

2017

Journal Article

Low dietary fiber intake increases Collinsella abundance in the gut microbiota of overweight and obese pregnant women

Gomez-Arango, Luisa F, Barrett, Helen L, Wilkinson, Shelley A, Callaway, Leonie K, McIntyre, H David, Morrison, Mark and Nitert, Marloes Dekker (2017). Low dietary fiber intake increases Collinsella abundance in the gut microbiota of overweight and obese pregnant women. Gut microbes, 9 (3), 1-13. doi: 10.1080/19490976.2017.1406584

Low dietary fiber intake increases Collinsella abundance in the gut microbiota of overweight and obese pregnant women

2017

Journal Article

Gene and genome-centric analyses of koala and wombat fecal microbiomes point to metabolic specialization for Eucalyptus digestion

Shiffman, Miriam E, Soo, Rochelle M, Dennis, Paul G, Morrison, Mark, Tyson, Gene W and Hugenholtz, Philip (2017). Gene and genome-centric analyses of koala and wombat fecal microbiomes point to metabolic specialization for Eucalyptus digestion. PeerJ, 5, 1-32. doi: 10.7717/peerj.4075

Gene and genome-centric analyses of koala and wombat fecal microbiomes point to metabolic specialization for Eucalyptus digestion

2017

Journal Article

Systematic Review and Meta-Analysis: Prevalence of Small Intestinal Bacterial Overgrowth in Chronic Liver Disease

Shah, Ayesha, Shanahan, Erin, Macdonald, Graeme A., Fletcher, Linda, Ghasemi, Pegah, Morrison, Mark, Jones, Mike and Holtmann, Gerald (2017). Systematic Review and Meta-Analysis: Prevalence of Small Intestinal Bacterial Overgrowth in Chronic Liver Disease. Seminars in Liver Disease, 37 (4), 388-400. doi: 10.1055/s-0037-1608832

Systematic Review and Meta-Analysis: Prevalence of Small Intestinal Bacterial Overgrowth in Chronic Liver Disease

2017

Journal Article

The gut bacterium and pathobiont Bacteroides vulgatus activates NF-κB in a human gut epithelial cell line in a strain and growth phase dependent manner

Cuív, Páraic Ó., de Wouters, Tomas, Giri, Rabina, Mondot, Stanislas, Smith, Wendy J., Blottière, Hervé M., Begun, Jakob and Morrison, Mark (2017). The gut bacterium and pathobiont Bacteroides vulgatus activates NF-κB in a human gut epithelial cell line in a strain and growth phase dependent manner. Anaerobe, 47, 209-217. doi: 10.1016/j.anaerobe.2017.06.002

The gut bacterium and pathobiont Bacteroides vulgatus activates NF-κB in a human gut epithelial cell line in a strain and growth phase dependent manner

2017

Journal Article

New insights into the diversity of the genus Faecalibacterium

Benevides, Leandro, Burman, Sriti, Martin, Rebecca, Robert, Veronique, Thomas, Muriel, Miquel, Sylvie, Chain, Florian, Sokol, Harry, Bermudez-Humaran, Luis G., Morrison, Mark, Langella, Philippe, Azevedo, Vasco A., Chatel, Jean-Marc and Soares, Siomar (2017). New insights into the diversity of the genus Faecalibacterium. Frontiers in Microbiology, 8 (SEP) 1790, 1790. doi: 10.3389/fmicb.2017.01790

New insights into the diversity of the genus Faecalibacterium

2017

Journal Article

Life in the small intestine: the forgotten microbiome?

Shanahan, Erin R., Holtmann, Gerald and Morrison, Mark (2017). Life in the small intestine: the forgotten microbiome?. Microbiology Australia, 38 (3), 116-121. doi: 10.1071/MA17045

Life in the small intestine: the forgotten microbiome?