Overview
Background
Dr Mitchell Stark is a molecular biologist and Group Leader/Senior Research Fellow from the Dermatology Research Centre (DRC) based at the Frazer Institute. His group has extensive experience in microRNA biology and biomarker discovery, next-generation sequencing, bioinformatics, and functional analysis for a variety of applications. The Stark Lab’s major research streams include: miRNA biomarkers for melanoma progression and the development a Genomics Atlas of pre-skin cancer lesions, which aim to provide insight into the early progression of melanoma and keratinocyte cancer, to aid in preventing invasive skin cancer formation and offer increased precision to the clinical management of patients.
Dr Stark completed his PhD (2015) in melanoma microRNA biomarkers at The Queensland University of Technology based at the QIMR Berghofer (QIMRB) Medical Research Institute. Prior to commencing his PhD, he worked as Senior Research Assistant (since 1999) and was trained and mentored in the Hayward lab (QIMRB) where he contributed to and led some seminal findings in the melanoma genetics/genomics field. Dr Stark joined the DRC in 2015 and in 2016 he was awarded a prestigious NHMRC Peter Doherty Early Career Fellowship to lead a pre-melanoma genomics program. Dr Stark has a career total of 80+ publications (h-index 35) including 1 patent and has published in respected journals such as Nature, Nature Genetics, Cancer Research, and Journal of Investigative Dermatology.
Availability
- Dr Mitchell Stark is:
- Available for supervision
- Media expert
Fields of research
Qualifications
- Bachelor (Honours) of Applied Science, Queensland University of Technology
- Doctor of Philosophy, Queensland University of Technology
Research interests
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MicroRNA Biomarkers
Current projects relate to melanoma progression microRNA biomarkers to aid in increased diagnostic precision of “ambiguous” melanocytic lesions as well as “real-time” monitoring of melanoma disease progression using a “liquid biopsy.”
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Genomics Atlas of pre-skin cancer lesions
Current projects involve using overlapping genomics datasets (e.g. exome, mRNA and miRNA transcriptome, methylation) as well as Spatial Profiling to greater understand the early hallmarks of pre-skin cancer development.
Works
Search Professor Mitchell Stark’s works on UQ eSpace
2008
Journal Article
Polymorphisms in MGMT and DNA repair genes and the risk of esophageal adenocarcinoma
Doecke, James, Zhao, Zhen Zhen, Pandeya, Nirmala, Sadeghi, Shahram, Stark, Mitchell, Green, Adele C., Hayward, Nicholas K., Webb, Penlope M. and Whiteman, David C. (2008). Polymorphisms in MGMT and DNA repair genes and the risk of esophageal adenocarcinoma. International Journal of Cancer, 123 (1), 174-180. doi: 10.1002/ijc.23410
2008
Journal Article
Common sequence variants on 20q11.22 confer melanoma susceptibility
Brown, K. M., MacGregor, S., Montgomery, G. W., Craig, D. W., Zhao, Z. Z., Iyadurai, K., Henders, A. K., Homer, N., Campbell, M. J., Stark, M., Thomas, S., Schmid, H., Maskiell, J. A., Jetann, J., Ferguson, M., Stephan, D. A., Cust, A. E., Whiteman, D. C., Green, A., Olsson, H., Puig, S., Ghiorzo, P., Hansson, J., Demenais, F., Goldstein, A. M., Gruis, N. A., Elder, D. E., Newton Bishop, J., Kefford, R. F. ... Hayward, N. (2008). Common sequence variants on 20q11.22 confer melanoma susceptibility. Nature Genetics, 40 (7), 838-840. doi: 10.1038/ng.163
2008
Journal Article
A comparison of CDKN2A mutation detection within the Melanoma Genetics Consortium (GenoMEL)
Harland, Mark, Goldstein, Alisa M., Kukalizch, Kairen, Taylor, Claire, Hogg, David, Puig, Susana, Badenas, Celia, Gruis, Nelleke, ter Huurne, Jeanet, Bergman, Wilma, Hayward, Nicholas K., Stark, Mitchell, Tsao, Hensin, Tucker, Margret A., Landi, Maria Teresa, Scarra, Giovanna B., Ghiorzo, Paola, Kanetsky, Peter A., Elder, David, Mann, Graham J., Holland, Elizabeth A., Bishop, D. Timothy and Newton Bishop, Julia (2008). A comparison of CDKN2A mutation detection within the Melanoma Genetics Consortium (GenoMEL). European Journal of Cancer, 44 (9), 1269-1274. doi: 10.1016/j.ejca.2008.03.005
2008
Journal Article
A single SNP in an evolutionary conserved region within intron 86 of the HERC2 gene determines human blue-brown eye colour
Sturm, Richard A., Duffy, David L., Zhao, Zhen Zhen, Leite, Fabio P.N., Stark, Mitchell S., Hayward, Nicholas K., Martin, Nicholas G. and Montgomery, Grant W. (2008). A single SNP in an evolutionary conserved region within intron 86 of the HERC2 gene determines human blue-brown eye colour. The American Journal of Human Genetics, 82 (2), 424-431. doi: 10.1016/j.ajhg.2007.11.005
2008
Journal Article
Single nucleotide polymorphisms in obesity-related genes and the risk of esophageal cancers
Doecke, J D, Zhao, Z Z, Stark, M S, Green, A C, Hayward, N K, Montgomery, G W, Webb, P M and Whiteman, D C (2008). Single nucleotide polymorphisms in obesity-related genes and the risk of esophageal cancers. Cancer Epidemiology, Biomarkers & Prevention, 17 (4), 1007-1012. doi: 10.1158/1055-9965.EPI-08-0023
2007
Journal Article
SiDCoN: A tool to aide scoring of DNA copy number changes in SNP chip data
Nancarrow, Derek J., Handoko, Herlina Y., Stark, Mitchell S., Whiteman, David C. and Hayward, Nicholas K. (2007). SiDCoN: A tool to aide scoring of DNA copy number changes in SNP chip data. PLoS One, 2 (10) e1093, e1093. doi: 10.1371/journal.pone.0001093
2007
Journal Article
Gene expression profiling in melanoma identifies novel downstream effectors of p14ARF
Packer, Leisl M., Pavey, Sandra J., Boyle, Glen M., Stark, Mitchell S., Ayub, Ana L., Rizos, Helen and Hayward, Nicholas K. (2007). Gene expression profiling in melanoma identifies novel downstream effectors of p14ARF. International Journal of Cancer, 121 (4), 784-790. doi: 10.1002/ijc.22725
2007
Journal Article
Molecular characterization of a t(9;12)(p21;q13) balanced chromosome translocation in combination with integrative genomics analysis identifies C9orf14 as a candidate tumor-suppressor
Pujana, M. A., Ruiz, A., Badenas, C., Puig-Butille, J-A., Nadal, M., Stark, M., Gomez, L., Valls, J., Sole, X., Hernandez, P., Cerrato, C., Madrigal, I., de Cid, R., Aguilar, H., Capella, G., Cal, S., James, M. R., Walker, G. J., Malvehy, J., Mila, M., Hayward, N. K., Estivill, X. and Puig, S. (2007). Molecular characterization of a t(9;12)(p21;q13) balanced chromosome translocation in combination with integrative genomics analysis identifies C9orf14 as a candidate tumor-suppressor. Genes, Chromosomes & Cancer, 46 (2), 155-162. doi: 10.1002/gcc.20396
2007
Journal Article
Broad tumor spectrum in a mouse model of multiple endocrine neoplasia type 1
Loffler, Kelly A., Biondi, Christine A., Gartside, Michael, Waring, Paul, Stark, Mitchell, Serewko-Auret, Magdalena M., Muller, H. Konrad, Hayward, Nicholas K. and Kay, Graham F. (2007). Broad tumor spectrum in a mouse model of multiple endocrine neoplasia type 1. International Journal of Cancer, 120 (2), 259-267. doi: 10.1002/ijc.22288
2007
Journal Article
The M531 mutation in CDKN2A is a founder mutation that predominates in melanoma patients with Scottish ancestry
Lang, J, Hayward, N, Goldgar, D, Tsao, H, Hogg, D, Palmer, J, Stark, M, Tobias, ES and MacKie, R (2007). The M531 mutation in CDKN2A is a founder mutation that predominates in melanoma patients with Scottish ancestry. Genes Chromosomes & Cancer, 46 (3), 277-287. doi: 10.1002/gcc.20410
2007
Journal Article
Features associated with germline CDKN2A mutations: a GenoMEL study of melanoma-prone families from three continents
Goldstein, Alisa M., Chan, May, Harland, Mark, Hayward, Nicholas K., Demenais, Florence, Bishop, D. Timothy, Azizi, Esther, Bergman, Wilma, Bianchi-Scarra, Giovanna, Bruno, William, Calista, Donato, Cannon Albright, Lisa A., Chaudru, Valerie, Chompret, Agnes, Cuellar, Francisco, Elder, David E., Ghiorzo, Paola, Gillanders, Elizabeth M., Gruis, Nelleke A., Hansson, Johan, Hogg, David, Holland, Elizabeth A., Kanetsky, Peter A., Kefford, Richard F., Landi, Maria T., Lang, Julie, Leachman, Sancy A., MacKie, Rona M., Magnusson, Veronica ... Eliason, Mark (2007). Features associated with germline CDKN2A mutations: a GenoMEL study of melanoma-prone families from three continents. Journal of Medical Genetics, 44 (2), 99-106. doi: 10.1136/jmg.2006.043802
2007
Journal Article
Genome-wide loss of heterozygosity and copy number analysis in melanoma using high-denisty single-nucleotide polymorphism arrays
Stark, M. and Hayward, N. (2007). Genome-wide loss of heterozygosity and copy number analysis in melanoma using high-denisty single-nucleotide polymorphism arrays. Cancer Research, 67 (6), 2632-2642. doi: 10.1158/0008-5472.CAN-06-4152
2006
Journal Article
High-risk Melanoma Susceptibility Genes and Pancreatic Cancer, Neural System Tumors, and Uveal Melanoma across GenoMEL
Goldstein, Alisa M., Chan, May, Harland, Mark, Gillanders, Elizabeth M., Hayward, Nicholas K., Avril, Marie-Francoise, Azizi, Esther, Bianchi-Scarra, Giovanna, Bishop, D. Timothy, Bressac-de Paillerets, Brigitte, Bruno, William, Calista, Donato, Cannon Albright, Lisa A., Demenais, Florence, Elder, David E., Ghiorzo, Paola, Gruis, Nelleke A., Hansson, Johan, Hogg, David, Holland, Elizabeth A., Kanetsky, Peter A., Kefford, Richard F., Landi, Maria Teresa, Lang, Julie, Leachman, Sancy A., MacKie, Rona M., Magnusson, Veronica, Mann, Graham J., Niendorf, Kristin ... Melanoma Genetics Consortium (GenoMEL) (2006). High-risk Melanoma Susceptibility Genes and Pancreatic Cancer, Neural System Tumors, and Uveal Melanoma across GenoMEL. Cancer research, 66 (20), 9818-9828. doi: 10.1158/0008-5472.CAN-06-0494
2006
Journal Article
Osteopontin is a Downstream Effector of the PI3-kinase Pathway in Melanomas that is Inversely Correlated with Functional PTEN
Packer, Leisl, Pavey, Sandra, Parker, Andrew, Stark, Mitchell, Johansson, Peter, Clarke, Belinda, Pollock, Pamela, Ringner, Markus and Hayward, Nicholas (2006). Osteopontin is a Downstream Effector of the PI3-kinase Pathway in Melanomas that is Inversely Correlated with Functional PTEN. Carcinogenesis, 27 (9), 1778-1786. doi: 10.1093/carcin/bgl016
2006
Journal Article
PI3-Kinase Subunits Are Infrequent Somatic Targets in Melanoma
Curtin, John A., Stark, Mitchell S., Pinkel, Daniel, Hayward, Nicholas K. and Bastian, Boris C. (2006). PI3-Kinase Subunits Are Infrequent Somatic Targets in Melanoma. Journal of Investigative Dermatology, 126 (7), 1660-1663. doi: 10.1038/sj.jid.5700311
2006
Journal Article
Mutation of the tumour suppressor p33ING1b is rare in melanoma
Stark, M., Puig-Butille, J. A., Walker, G., Badenas, C., Malvehy, J., Hayward , N. and Puig, S. (2006). Mutation of the tumour suppressor p33ING1b is rare in melanoma. British Journal of Dermatology, 155 (1), 94-99. doi: 10.1111/j.1365-2133.2006.07274.x
2006
Journal Article
Rapid screening of 4000 individuals for germ-line variations in the BRAF gene
James, Michael R., Dumeni, Troy, Stark, Mitchell S., Duffy, David L., Montgomery, Grant W., Martin, Nicholas G. and Hayward, Nicholas K. (2006). Rapid screening of 4000 individuals for germ-line variations in the BRAF gene. Clinical Chemistry, 52 (9), 1675-1678. doi: 10.1373/clinchem.2006.070169
2005
Journal Article
BRAF Polymorphisms and Risk of Melanocytic Neoplasia
James, Michael R., Roth, Richard B., Shi, Michael M., Kammerer, Stefan, Nelson, Matthew R., Stark, Mitchell S., Dumenil, Troy, Montgomery, Grant W., Hayward, Nicholas K., Martin, Nicholas G., Braun, Andreas and Duffy, David L. (2005). BRAF Polymorphisms and Risk of Melanocytic Neoplasia. Journal of Investigative Dermatology, 125 (6), 1252-1258. doi: 10.1111/j.0022-202X.2005.23937.x
2005
Journal Article
Activation of the MAPK pathway is a common event in uveal melanomas although it rarely occurs through mutation of BRAF or RAS
Zuidervaart, W., van Nieuwpoort, F., Stark, M., Dijkman, R., Packer, L., Borgstein, A. -M., Pavey, S., van der Velden, P., Out, C., Jager, M. J., Hayward, N. K. and Gruis, N. A. (2005). Activation of the MAPK pathway is a common event in uveal melanomas although it rarely occurs through mutation of BRAF or RAS. British Journal of Cancer, 92 (11), 2032-2038. doi: 10.1038/sj.bjc.6602598
2004
Journal Article
Microarray expression profiling in melanoma reveals a BRAF mutation signature
Pavey, Sandra, Johansson, Peter, Packer, Leisl, Taylor, Jennifer, Stark, Mitchell, Pollock, Pamela M., Walker, Graeme J., Boyle, Glen M., Harper, Ursula, Cozzi, Sarah-Jane, Hansen, Katherine, Yudt, Laura, Schmidt, Chris, Hersey, Peter, Ellem, Kay A. O., O'Rourke, Michael G. E., Parsons, Peter G., Meltzer, Paul, Ringnér, Markus and Hayward, Nicholas K. (2004). Microarray expression profiling in melanoma reveals a BRAF mutation signature. Oncogene, 23 (23), 4060-4067. doi: 10.1038/sj.onc.1207563
Funding
Current funding
Past funding
Supervision
Availability
- Dr Mitchell Stark is:
- Available for supervision
Before you email them, read our advice on how to contact a supervisor.
Available projects
-
PhD projects available
Australian domestic or on-shore International student applicants only.
The Stark Lab is seeking talented and highly motivated PhD student(s) to join their team at The Dermatology Research Centre, The University of Queensland Diamantina Institute. Various projects are available relating to 2 major research streams: microRNA biomarkers for melanoma progression and the development a Genomics Atlas of pre-skin cancer lesions.
If you are interested to hear more about the projects, please send your current CV, Academic Transcript, and Cover Letter to m.stark@uq.edu.au
Living stipend scholarships and Tuition Scholarships are available for application from the UQ Graduate School which are currently a Base Stipend of $28,854 per annum tax free (2022 rate), indexed annually, Overseas Student Health Cover (OSHC). Top-up Scholarships (tax-free) may also be available.
Applications for scholarships close 17 July 2022 (International) and 25 September (Domestic) for commencement in RQ1 and RQ2 2023.
Supervision history
Current supervision
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Doctor Philosophy
Spatial molecular profiling of melanoma and correlation with dermoscopic patterns
Principal Advisor
Other advisors: Dr Harald Oey, Professor Peter Soyer, Dr Brigid Betz-Stablein
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Doctor Philosophy
The genomic architecture of suspicious lesions and skin in photodamaged and non-photodamaged areas (PhotoMelanoma)
Principal Advisor
Other advisors: Dr Quan Nguyen, Professor Peter Soyer, Dr Brigid Betz-Stablein
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Doctor Philosophy
Predictive and prognostic biomarkers for melanoma progression (BioMEL)
Principal Advisor
Other advisors: Professor Kiarash Khosrotehrani
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Doctor Philosophy
Precision diagnostics for early melanoma detection
Principal Advisor
Other advisors: Dr Quan Nguyen, Professor Peter Soyer, Dr Snehlata Kumari
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Doctor Philosophy
A nano-map of cytokines in skin: Personalising treatment of skin inflammation by a digital nanotechnology
Associate Advisor
Other advisors: Professor Matt Trau, Dr Alain Wuethrich
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Doctor Philosophy
Harnessing Epigenetic Plasticity to Develop Effective Novel Therapeutic Strategies for Recurrent Melanoma
Associate Advisor
Other advisors: Associate Professor Jason Lee
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Doctor Philosophy
Harnessing nanotechnology to unravel the phenotypic heterogeneity of extracellular vesicles
Associate Advisor
Other advisors: Professor Matt Trau, Dr Abu Sina, Dr Alain Wuethrich
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Doctor Philosophy
Deep learning analysis of spatial-omics and histopathological images to predict prognosis in gastrointestinal cancer
Associate Advisor
Other advisors: Dr Quan Nguyen
Completed supervision
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2020
Master Philosophy
Identification of clinically useful plasma miRNA as minimally invasive biomarkers for early stage Non-Small Cell Lung Carcinoma (NSCLC)
Principal Advisor
Other advisors: Professor Peter Soyer
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2018
Master Philosophy
Dermoscopic and molecular correlation of melanocytic naevi
Associate Advisor
Other advisors: Associate Professor Rick Sturm, Professor Peter Soyer
Media
Enquiries
Contact Dr Mitchell Stark directly for media enquiries about:
- Cancer Biomarker
- Early melanoma detection
- Genomics
- Melanoma
- microRNA
- Naevi
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