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Dr Yang Yang
Dr

Yang Yang

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Overview

Availability

Dr Yang Yang is:
Available for supervision

Qualifications

  • Doctor of Philosophy, University of New South Wales

Research interests

  • Bioinformatics; Machine learning; Dimensionality Reduction; Geometric Deep Learning

Works

Search Professor Yang Yang’s works on UQ eSpace

10 works between 2019 and 2023

1 - 10 of 10 works

2023

Journal Article

Dimensionality reduction under scrutiny

Yang, Yang, Tuong, Zewen K. and Yu, Di (2023). Dimensionality reduction under scrutiny. Nature Computational Science, 3 (1), 8-9. doi: 10.1038/s43588-022-00383-1

Dimensionality reduction under scrutiny

2022

Journal Article

Extrafollicular PD-1highCXCR5–CD4+ T cells participate in local immunoglobulin production in nasal polyps

Wang, Zhi-Chao, Yao, Yin, Chen, Cai-Ling, Guo, Cui-Lian, Ding, Hong-Xia, Song, Jia, Wang, Zhe-Zheng, Wang, Nan, Li, Xue-Li, Liao, Bo, Yang, Yang, Yu, Di and Liu, Zheng (2022). Extrafollicular PD-1highCXCR5–CD4+ T cells participate in local immunoglobulin production in nasal polyps. Journal of Allergy and Clinical Immunology, 149 (2), 610-623. doi: 10.1016/j.jaci.2021.06.023

Extrafollicular PD-1highCXCR5–CD4+ T cells participate in local immunoglobulin production in nasal polyps

2021

Journal Article

Understand SLE heterogeneity in the era of omics, big data, and artificial intelligence

Puri, Prianka, Jiang, Simon H., Yang, Yang, Mackay, Fabienne and Yu, Di (2021). Understand SLE heterogeneity in the era of omics, big data, and artificial intelligence. Rheumatology and Autoimmunity, 1 (1), 38-49. doi: 10.1002/rai2.12010

Understand SLE heterogeneity in the era of omics, big data, and artificial intelligence

2021

Journal Article

Selenium–GPX4 axis protects follicular helper T cells from ferroptosis

Yao, Yin, Chen, Zhian, Zhang, Hao, Chen, Cailing, Zeng, Ming, Yunis, Joseph, Wei, Yunbo, Wan, Yanmin, Wang, Naiqi, Zhou, Mingzhe, Qiu, Chao, Zeng, Qunxiong, Ong, Hong Sheng, Wang, Hao, Makota, Fadzai Victor, Yang, Yang, Yang, Zhaohui, Wang, Nan, Deng, Jun, Shen, Chao, Xia, Yan, Yuan, Lin, Lian, Zhaoqin, Deng, Yike, Guo, Cuilian, Huang, Ao, Zhou, Pengcheng, Shi, Haibo, Zhang, Weitian ... Yu, Di (2021). Selenium–GPX4 axis protects follicular helper T cells from ferroptosis. Nature Immunology, 22 (9), 1127-1139. doi: 10.1038/s41590-021-00996-0

Selenium–GPX4 axis protects follicular helper T cells from ferroptosis

2021

Journal Article

Dimensionality reduction by UMAP reinforces sample heterogeneity analysis in bulk transcriptomic data

Yang, Yang, Sun, Hongjian, Zhang, Yu, Zhang, Tiefu, Gong, Jialei, Wei, Yunbo, Duan, Yong-Gang, Shu, Minglei, Yang, Yuchen, Wu, Di and Yu, Di (2021). Dimensionality reduction by UMAP reinforces sample heterogeneity analysis in bulk transcriptomic data. Cell Reports, 36 (4) 109442, 109442. doi: 10.1016/j.celrep.2021.109442

Dimensionality reduction by UMAP reinforces sample heterogeneity analysis in bulk transcriptomic data

2021

Journal Article

Association of low blood arsenic exposure with level of malondialdehyde among Chinese adults aged 65 and older

Tan, Qiyue, Lv, Yuebin, Zhao, Feng, Zhou, Jinhui, Yang, Yang, Liu, Yingchun, Zhang, Mingyuan, Lu, Feng, Wei, Yuan, Chen, Xin, Zhang, Ruizhi, Chen, Chen, Wu, Bing, Zhang, Xiaochang, Li, Chengcheng, Huang, Hongyuan, Cai, Junfang, Cao, Zhaojin, Yu, Di, Ji, John S., Zhao, Shuhua and Shi, Xiaoming (2021). Association of low blood arsenic exposure with level of malondialdehyde among Chinese adults aged 65 and older. Science of the Total Environment, 758 143638, 1-8. doi: 10.1016/j.scitotenv.2020.143638

Association of low blood arsenic exposure with level of malondialdehyde among Chinese adults aged 65 and older

2020

Journal Article

Prominent immune signatures of T cells are specifically associated with indolent B-cell lymphoproliferative disorders and predict prognosis

Yi, Shuhua, Zhang, Yu, Xiong, Wenjie, Chen, Weiwei, Hou, Zhaohua, Yang, Yang, Yan, Yuting, Wei, Yunbo, Cui, Rui, Wang, Huijun, Yu, Zhen, Li, Heng, Li, Zengjun, Liu, Wei, Lv, Rui, Wang, Tingyu, Ru, Kun, Zou, Dehui, Shu, Minglei, Qiu, Lugui and Yu, Di (2020). Prominent immune signatures of T cells are specifically associated with indolent B-cell lymphoproliferative disorders and predict prognosis. Clinical and Translational Immunology, 9 (1) e01105. doi: 10.1002/cti2.1105

Prominent immune signatures of T cells are specifically associated with indolent B-cell lymphoproliferative disorders and predict prognosis

2019

Journal Article

Selectivity estimation on set containment search

Yang, Yang, Zhang, Wenjie, Zhang, Ying, Lin, Xuemin and Wang, Liping (2019). Selectivity estimation on set containment search. Data Science and Engineering, 4 (3), 254-268. doi: 10.1007/s41019-019-00104-1

Selectivity estimation on set containment search

2019

Conference Publication

GB-KMV: an augmented KMV sketch for approximate containment similarity search

Yang, Yang, Zhang, Ying, Zhang, Wenjie and Huang, Zengfeng (2019). GB-KMV: an augmented KMV sketch for approximate containment similarity search. 2019 IEEE 35th International Conference on Data Engineering (ICDE), Macao, China, 8-11 April 2019. Piscataway, NJ USA: Institute of Electrical and Electronics Engineers. doi: 10.1109/icde.2019.00048

GB-KMV: an augmented KMV sketch for approximate containment similarity search

2019

Conference Publication

Selectivity estimation on set containment search

Yang, Yang, Zhang, Wenjie, Zhang, Ying, Lin, Xuemin and Wang, Liping (2019). Selectivity estimation on set containment search. 24th International Conference, DASFAA 2019, Chiang Mai, Thailand, 22–25 April 2019. Cham, Switzerland: Springer. doi: 10.1007/978-3-030-18576-3_20

Selectivity estimation on set containment search

Supervision

Availability

Dr Yang Yang is:
Available for supervision

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Supervision history

Current supervision

  • Doctor Philosophy

    Temporal tracking of T cell functional differentiation by single-cell RNA-sequencing to inform immunotherapy

    Associate Advisor

    Other advisors: Dr Pablo Canete, Professor Di Yu

  • Doctor Philosophy

    An integration of multi-omics and machine learning to stratify patients with lupus nephritis for precision medicine

    Associate Advisor

    Other advisors: Professor Di Yu

  • Doctor Philosophy

    Modelling T cell functional subsets

    Associate Advisor

    Other advisors: Professor Di Yu

  • Doctor Philosophy

    Investigate T cell specificity and function in immune responses by systems immunology

    Associate Advisor

    Other advisors: Dr Kelvin Tuong, Professor Di Yu

  • Doctor Philosophy

    Translational meaning of the efficacy of immunotherapies as neoadjuvants to treat Head and Neck cancers.

    Associate Advisor

    Other advisors: Dr Quan Nguyen, Dr Kelvin Tuong, Associate Professor James Wells, Dr Jazmina Gonzalez Cruz

Media

Enquiries

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