Overview
Availability
- Professor Bernard Carroll is:
- Available for supervision
Fields of research
Works
Search Professor Bernard Carroll’s works on UQ eSpace
2024
Journal Article
Enhancing plant biotechnology by nanoparticle delivery of nucleic acids
Yong, Jiaxi, Wu, Miaomiao, Carroll, Bernard J., Xu, Zhi Ping and Zhang, Run (2024). Enhancing plant biotechnology by nanoparticle delivery of nucleic acids. Trends in Genetics, 40 (4), 352-363. doi: 10.1016/j.tig.2024.01.005
2023
Journal Article
Double-stranded RNA prevents and cures infection by rust fungi
Degnan, Rebecca M., Shuey, Louise S., Radford-Smith, Julian, Gardiner, Donald M., Carroll, Bernard J., Mitter, Neena, McTaggart, Alistair R. and Sawyer, Anne (2023). Double-stranded RNA prevents and cures infection by rust fungi. Communications Biology, 6 (1) 1234, 1-10. doi: 10.1038/s42003-023-05618-z
2023
Conference Publication
Nanoclay particles for active uptake and systemic delivery of genes into intact plants
Carroll, B. J., Yong, J., Xu, W., Wu, M., Zhang, R., Mann, C. W. G., Liu, G., Mitter, N. and Xu, Z. P. (2023). Nanoclay particles for active uptake and systemic delivery of genes into intact plants. 2023 In Vitro Biology Meeting, Norfolk, VA United States, 10-14 June 2023. Heidelberg, Germany: Springer.
2023
Journal Article
RNA-based control of fungal pathogens in plants
Mann, Christopher W. G., Sawyer, Anne, Gardiner, Donald M., Mitter, Neena, Carroll, Bernard J. and Eamens, Andrew L. (2023). RNA-based control of fungal pathogens in plants. International Journal of Molecular Sciences, 24 (15) 12391, 1-34. doi: 10.3390/ijms241512391
2023
Journal Article
Miniature inverted-repeat transposable elements: small DNA transposons that have contributed to plant MICRORNA gene evolution
Pegler, Joseph L., Oultram, Jackson M. J., Mann, Christopher W. G., Carroll, Bernard J., Grof, Christopher P. L. and Eamens, Andrew L. (2023). Miniature inverted-repeat transposable elements: small DNA transposons that have contributed to plant MICRORNA gene evolution. Plants, 12 (5) 1101, 1-30. doi: 10.3390/plants12051101
2022
Journal Article
Exogenous double‐stranded RNA inhibits the infection physiology of rust fungi to reduce symptoms in planta
Degnan, Rebecca M., McTaggart, Alistair R., Shuey, Louise S., Pame, Leny Jane S., Smith, Grant R., Gardiner, Donald M., Nock, Volker, Soffe, Rebecca, Sale, Sarah, Garrill, Ashley, Carroll, Bernard J., Mitter, Neena and Sawyer, Anne (2022). Exogenous double‐stranded RNA inhibits the infection physiology of rust fungi to reduce symptoms in planta. Molecular Plant Pathology, 24 (3), 191-207. doi: 10.1111/mpp.13286
2022
Journal Article
DEFECTIVE EMBRYO AND MERISTEMS1 (DEM1) Is Essential for Cell Proliferation and Cell Differentiation in Tomato
Matthew, Louisa, Reyes, Melquiades E. C., Mann, Christopher W. G., McDowall, Alasdair W., Eamens, Andrew L. and Carroll, Bernard J. (2022). DEFECTIVE EMBRYO AND MERISTEMS1 (DEM1) Is Essential for Cell Proliferation and Cell Differentiation in Tomato. Plants, 11 (19) 2545, 1-27. doi: 10.3390/plants11192545
2022
Journal Article
Clay nanoparticles efficiently deliver small interfering RNA to intact plant leaf cells
Yong, Jiaxi, Wu, Miaomiao, Zhang, Run, Bi, Shengnan, Mann, Christopher W. G., Mitter, Neena, Carroll, Bernard J. and Xu, Zhi Ping (2022). Clay nanoparticles efficiently deliver small interfering RNA to intact plant leaf cells. Plant Physiology, 190 (4), 2187-2202. doi: 10.1093/plphys/kiac430
2022
Journal Article
Tospoviruses induce small interfering RNAs targeting viral sequences and endogenous transcripts in solanaceous plants
Fletcher, Stephen J., Peters, Jonathan R., Olaya, Cristian, Persley, Denis M., Dietzgen, Ralf G., Carroll, Bernard J., Pappu, Hanu and Mitter, Neena (2022). Tospoviruses induce small interfering RNAs targeting viral sequences and endogenous transcripts in solanaceous plants. Pathogens, 11 (7) 745, 745. doi: 10.3390/pathogens11070745
2021
Journal Article
Sheet-like clay nanoparticles deliver RNA into developing pollen to efficiently silence a target gene
Yong, Jiaxi, Zhang, Run, Bi, Shengnan, Li, Peng, Sun, Luyao, Mitter, Neena, Carroll, Bernard J and Xu, Zhi Ping (2021). Sheet-like clay nanoparticles deliver RNA into developing pollen to efficiently silence a target gene. Plant Physiology, 187 (2), 1-14. doi: 10.1093/plphys/kiab303
2021
Journal Article
Defective embryo and meristems genes are required for cell division and gamete viability in Arabidopsis
Lee, Chin Hong, Hawker, Nathaniel P., Peters, Jonathan R., Lonhienne, Thierry G. A., Gursanscky, Nial R., Matthew, Louisa, Brosnan, Christopher A., Mann, Christopher W. G., Cromer, Laurence, Taochy, Christelle, Ngo, Quy A., Sundaresan, Venkatesan, Schenk, Peer M., Kobe, Bostjan, Borges, Filipe, Mercier, Raphael, Bowman, John L. and Carroll, Bernard J. (2021). Defective embryo and meristems genes are required for cell division and gamete viability in Arabidopsis. PL o S Genetics, 17 (5) e1009561, 1-31. doi: 10.1371/journal.pgen.1009561
2021
Journal Article
Contrasting epigenetic control of transgenes and endogenous genes promotes post-transcriptional transgene silencing in Arabidopsis
Butel, Nicolas, Yu, Agnès, Le Masson, Ivan, Borges, Filipe, Elmayan, Taline, Taochy, Christelle, Gursanscky, Nial R., Cao, Jiangling, Bi, Shengnan, Sawyer, Anne, Carroll, Bernard J. and Vaucheret, Hervé (2021). Contrasting epigenetic control of transgenes and endogenous genes promotes post-transcriptional transgene silencing in Arabidopsis. Nature Communications, 12 (1) 2787, 1-12. doi: 10.1038/s41467-021-22995-3
2020
Journal Article
Can-Seq: a PCR and DNA sequencing strategy for identifying new alleles of known and candidate genes
Cao, Jiangling, Gursanscky, Nial R., Fletcher, Stephen J., Sawyer, Anne, Wadia, Mehershad, McKeough, Lachlan, Coleman, Marek, Dressel, Uwe, Taochy, Christelle, Mitter, Neena, Vaucheret, Herv and Carroll, Bernard J. (2020). Can-Seq: a PCR and DNA sequencing strategy for identifying new alleles of known and candidate genes. Plant Methods, 16 (1) 16, 16. doi: 10.1186/s13007-020-0555-0
2019
Journal Article
Post-transcriptional gene silencing triggers dispensable DNA methylation in gene body in Arabidopsis
Taochy, Christelle, Yu, Agnès, Bouché, Nicolas, Bouteiller, Nathalie, Elmayan, Taline, Dressel, Uwe, Carroll, Bernard J. and Vaucheret, Hervé (2019). Post-transcriptional gene silencing triggers dispensable DNA methylation in gene body in Arabidopsis. Nucleic acids research, 47 (17), 9104-9114. doi: 10.1093/nar/gkz636
2018
Journal Article
Evolution and Diversification of Small RNA Pathways in Flowering Plants
Lee, Chin Hong and Carroll, Bernard J. (2018). Evolution and Diversification of Small RNA Pathways in Flowering Plants. Plant and Cell Physiology, 59 (11), 2169-2187. doi: 10.1093/pcp/pcy167
2018
Journal Article
RNA-dependent epigenetic silencing directs transcriptional downregulation caused by intronic repeat expansions
Eimer, Hannes, Sureshkumar, Sridevi, Singh Yadav, Avilash, Kraupner-Taylor, Calvin, Bandaranayake, Champa, Seleznev, Andrei, Thomason, Tamblyn, Fletcher, Stephen J., Gordon, Stephanie Frances, Carroll, Bernard J. and Balasubramanian, Sureshkumar (2018). RNA-dependent epigenetic silencing directs transcriptional downregulation caused by intronic repeat expansions. Cell, 174 (5), 1095-1105.e11. doi: 10.1016/j.cell.2018.06.044
2018
Journal Article
SCRAM: a pipeline for fast index-free small RNA read alignment and visualization
Fletcher, Stephen J., Boden, Mikael, Mitter, Neena and Carroll, Bernard J. (2018). SCRAM: a pipeline for fast index-free small RNA read alignment and visualization. Bioinformatics, 34 (15), 2670-2672. doi: 10.1093/bioinformatics/bty161
2017
Journal Article
A Genetic Screen for Impaired Systemic RNAi Highlights the Crucial Role of DICER-LIKE 2
Taochy, Christelle, Gursanscky, Nial R., Cao, Jiangling, Fletcher, Stephen J., Dressel, Uwe, Mitter, Neena, Tucker, Matthew R., Koltunow, Anna M G., Bowman, John L., Vaucheret, Hervé and Carroll, Bernard J. (2017). A Genetic Screen for Impaired Systemic RNAi Highlights the Crucial Role of DICER-LIKE 2. Plant Physiology, 175 (3), 1424-1437. doi: 10.1104/pp.17.01181
2017
Journal Article
Induction of virus resistance by exogenous application of double-stranded RNA
Mitter, Neena , Worrall, Elizabeth A., Robinson, Karl E., Xu, Zhi Ping and Carroll, Bernard J. (2017). Induction of virus resistance by exogenous application of double-stranded RNA. Current Opinion in Virology, 26, 49-55. doi: 10.1016/j.coviro.2017.07.009
2017
Journal Article
Clay nanosheets for topical delivery of RNAi for sustained protection against plant viruses
Mitter, Neena, Worrall, Elizabeth A., Robinson, Karl E., Li, Peng, Jain, Ritesh G., Taochy, Christelle, Fletcher, Stephen J., Carroll, Bernard J., Lu, G. Q. (Max) and Xu, Zhi Ping (2017). Clay nanosheets for topical delivery of RNAi for sustained protection against plant viruses. Nature Plants, 3 (2) 16207, 16207.1-16207.10. doi: 10.1038/nplants.2016.207
Funding
Supervision
Availability
- Professor Bernard Carroll is:
- Available for supervision
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Supervision history
Current supervision
-
Doctor Philosophy
Discovery of genes involved in systemic RNAi in plants
Principal Advisor
Other advisors: Dr Chris Brosnan, Dr Anne Sawyer
-
Doctor Philosophy
Systemic RNA biopesticides for controlling fungal pathogens in grain crops
Principal Advisor
Other advisors: Professor Neena Mitter, Dr Anne Sawyer
-
Doctor Philosophy
Mechanisms of RNA uptake and gene silencing in plant pathogens
Associate Advisor
Other advisors: Professor Neena Mitter, Dr Donald Gardiner, Dr Anne Sawyer
-
Doctor Philosophy
RNA vaccines for next generation crop protection against fungal pathogens
Associate Advisor
Other advisors: Professor Neena Mitter, Dr Anne Sawyer
-
Doctor Philosophy
Propagation and genetic enhancement of Duboisia species for production of tropane alkaloids
Associate Advisor
Other advisors: Professor Robert Henry, Professor Neena Mitter
-
Doctor Philosophy
Responsive probe for time-gated luminescence bioassay and imaging
Associate Advisor
Other advisors: Dr Run Zhang
Completed supervision
-
2024
Doctor Philosophy
Systemic Post-Transcriptional Silencing of Transgenes in Arabidopsis
Principal Advisor
Other advisors: Dr Chris Brosnan, Professor Neena Mitter, Dr Anne Sawyer
-
2020
Doctor Philosophy
Characterising candidate genes for roles in Fusarium pseudograminearum-host interactions in the model cereal Brachypodium distachyon
Principal Advisor
-
2018
Doctor Philosophy
Biological and biochemical function of DEFECTIVE EMBRYO and MERISTEM (DEM) in plants
Principal Advisor
Other advisors: Professor Neena Mitter
-
2016
Doctor Philosophy
Genetic analysis of systemic RNA silencing in Arabidopsis
Principal Advisor
Other advisors: Professor Neena Mitter
-
2013
Doctor Philosophy
Characterisation of the DEFECTIVE EMBRYO and MERISTEMS(DEM) genes of plants
Principal Advisor
Other advisors: Professor James Fraser
-
2012
Doctor Philosophy
RNA-directed intercellular spreading of gene silencing in Arabidopsis thaliana
Principal Advisor
Other advisors: Professor Neena Mitter
-
-
2007
Doctor Philosophy
EPIGENETICS AND REGULATION OF PLANT GENE EXPRESSION
Principal Advisor
Other advisors: Professor Neena Mitter
-
2006
Doctor Philosophy
THE IMPORTANCE OF EPIGENETICS IN MAMMALS
Principal Advisor
Other advisors: Professor David Hume
-
2005
Doctor Philosophy
THE EXTENT AND IMPORTANCE OF DNA METHYLATION IN PLANTS
Principal Advisor
Other advisors: Dr Peter Dart
-
2005
Doctor Philosophy
CHARACTERISING MACADAMIA WITH DNA MARKERS
Principal Advisor
Other advisors: Emeritus Professor Peter Gresshoff
-
2005
Doctor Philosophy
GENETIC MODIFICATION OF NODULATION AND N2 FIXATION IN SOYBEAN
Principal Advisor
Other advisors: Emeritus Professor Shu Fukai
-
2004
Doctor Philosophy
DEVELOPMENT OF TRANSGENIC CARROTS AS A POTENTIAL VACCINE DELIVERY SYSTEM
Principal Advisor
-
2004
Doctor Philosophy
THE MAP BASED CLONING OF LEGUME NODULATION GENES FROM SOYBEAN
Principal Advisor
-
2004
Master Philosophy
ISOLATION OF DNA MARKERS AND RECOMBINATION EVENTS IN THE VICINITY OF THE Fusarium oxysporum f.sp. lycopersici (FOL) RESISTANCE GENE I-3 OF TOMATO
Principal Advisor
-
2003
Doctor Philosophy
MOLECULAR GENETIC ANALYSIS OF THE DEFECTIVE EMBRYO AND MERISTEMS (DEM) GENE AND CLOSELY LINKED GENES IN TOMATO
Principal Advisor
Other advisors: Emeritus Professor Alasdair McDowall AM
-
2002
Doctor Philosophy
CLONING AND CHARACTERISATION OF GENES ENCODING PHOSPHATE AND SULPHATE TRANSPORTERS FROM RICE
Principal Advisor
-
2002
Doctor Philosophy
HETEROLOGOUS TRANSPOSON TAGGING IN TOMATO USING THE DEM GENE AS A NOVEL EXCISION MARKER
Principal Advisor
Other advisors: Professor Ian Godwin
-
2024
Doctor Philosophy
Propagation and genetic enhancement of Duboisia species for production of tropane alkaloids
Associate Advisor
Other advisors: Professor Robert Henry, Professor Neena Mitter
-
2024
Doctor Philosophy
Investigating the Fate of Topically Applied dsRNA in Crop Disease Resistance
Associate Advisor
Other advisors: Mr Stephen Fletcher, Dr Chris Brosnan, Professor Neena Mitter
-
2023
Doctor Philosophy
Computational discovery of miRNA in bread wheat
Associate Advisor
Other advisors: Associate Professor Milos Tanurdzic
-
2023
Doctor Philosophy
Developing efficient nanoparticle-based platform to deliver biomolecules for plant modification
Associate Advisor
Other advisors: Dr Run Zhang
-
2019
Doctor Philosophy
BioClay: Clay nanoparticles for topical delivery of RNAi for sustained protection against plant viruses
Associate Advisor
Other advisors: Professor Neena Mitter
-
2018
Doctor Philosophy
Regulation of adventitious rooting in avocado for improved clonal propagation technologies
Associate Advisor
Other advisors: Dr Alice Hayward, Professor Christine Beveridge, Professor Neena Mitter
-
2016
Doctor Philosophy
Cellular and molecular interactions of cytorhabdoviruses with their plant hosts
Associate Advisor
Other advisors: Dr Ralf Dietzgen, Associate Professor Karyn Johnson
-
2013
Doctor Philosophy
Regulation of Nitrogen Metabolism in Fungi: The Impact of Nitrogen Catabolism on Virulence in the Fungal Pathogen Cryptococcus neoformans
Associate Advisor
Other advisors: Professor James Fraser
-
2013
Doctor Philosophy
Subtelomeric Microevolution in the Human Fungal Pathogen Cryptococcus neoformans
Associate Advisor
Other advisors: Professor James Fraser
-
2012
Doctor Philosophy
New strategies for antifungal development in Cryptococcus neoformans exploiting purine metabolism and microevolution during infection
Associate Advisor
Other advisors: Professor James Fraser
-
2011
Doctor Philosophy
Role of viral and host microRNAs in plant virus interaction
Associate Advisor
-
2004
Doctor Philosophy
AN EVALUATION OF MARKER ASSISTED SELECTION (MAS) STRATEGIES FOR GENETIC IMPROVEMENT OF WHEAT
Associate Advisor
Other advisors: Professor Ian Godwin, Professor Mark Cooper
-
2003
Doctor Philosophy
DEVELOPMENT OF TRANSFORMATION SYSTEMS IN CEREALS
Associate Advisor
-
2002
Doctor Philosophy
TRANSGENES AS TOOLS FOR UNDERSTANDING THE INHERITANCE AND EXPRESSION OF GENES IN SUGARCANE
Associate Advisor
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