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2007

Journal Article

Ruminal nitrogen metabolism: perspectives for integration of microbiology and nutrition for dairy

Firkins, J.L., Yu, Z. and Morrison, M. (2007). Ruminal nitrogen metabolism: perspectives for integration of microbiology and nutrition for dairy. Journal of Dairy Science, 90: E1-16. (13 electronic suppl. 1), E1-E16. doi: 10.3168/jds.2006-518

Ruminal nitrogen metabolism: perspectives for integration of microbiology and nutrition for dairy

2007

Journal Article

Electricity generation from cellulose by rumen microorganisms in microbial fuel cells

Rismani-Yazdi, Hamid, Christy, Ann D., Dehority, Burk A., Morrison, Mark, Yu, Zhongtang and Tuovinen, Olli H. (2007). Electricity generation from cellulose by rumen microorganisms in microbial fuel cells. Biotechnology and Bioengineering, 97 (6), 1398-1407. doi: 10.1002/bit.21366

Electricity generation from cellulose by rumen microorganisms in microbial fuel cells

2007

Conference Publication

Antimicrobial resistance genes in livestock production systems: Concepts and consequences

Yu, Z. and Morrison , M. (2007). Antimicrobial resistance genes in livestock production systems: Concepts and consequences. 7th International Symposium on the Nutrition of Herbivores, Beijing, China, 17-22 September 2007. Beijing, China: China Agricultural University Press.

Antimicrobial resistance genes in livestock production systems: Concepts and consequences

2006

Journal Article

The functional repertoire of prokaryote cellulosomes includes the serpin superfamily of serine proteinase inhibitors

Kang, Seungha, Barak, Yoav, Lamed, Raphael, Bayer, Edward A. and Morrison, Mark (2006). The functional repertoire of prokaryote cellulosomes includes the serpin superfamily of serine proteinase inhibitors. Molecular Microbiology, 60 (6), 1344-1354. doi: 10.1111/j.1365-2958.2006.05182.x

The functional repertoire of prokaryote cellulosomes includes the serpin superfamily of serine proteinase inhibitors

2006

Journal Article

Improved serial analysis of V1 ribosomal sequence tags (SARST-V1) provides a rapid, comprehensive, sequence-based characterization of bacterial diversity and community composition

Yu, Zhongtang, Yu, Marie and Morrison, Mark (2006). Improved serial analysis of V1 ribosomal sequence tags (SARST-V1) provides a rapid, comprehensive, sequence-based characterization of bacterial diversity and community composition. Environmental Microbiology, 8 (4), 603-611. doi: 10.1111/j.1462-2920.2005.00933.x

Improved serial analysis of V1 ribosomal sequence tags (SARST-V1) provides a rapid, comprehensive, sequence-based characterization of bacterial diversity and community composition

2006

Conference Publication

Ruminal nitrogen metabolism: The current microbiological outlook.

Morrison, M. and Yu, Z. (2006). Ruminal nitrogen metabolism: The current microbiological outlook.. SAVOY: AMER SOC ANIMAL SCIENCE.

Ruminal nitrogen metabolism: The current microbiological outlook.

2005

Journal Article

Development and application of real-time PCR assays for quantification of genes encoding tetracycline resistance

Yu, Zhongtang, Michel, Frederick C., Hansen, Glenn, Wittum, Thomas and Morrison, Mark (2005). Development and application of real-time PCR assays for quantification of genes encoding tetracycline resistance. Applied and Environmental Microbiology, 71 (11), 6926-6933. doi: 10.1128/AEM.71.11.6926-6933.2005

Development and application of real-time PCR assays for quantification of genes encoding tetracycline resistance

2005

Journal Article

Novel molecular features of the fibrolytic intestinal bacterium fibrobacter intestinalis not shared with fibrobacter succinogenes as determined by suppressive subtractive hybridization

Qi, Meng, Nelson, Karen E., Daugherty, Sean C., Nelson, William C., Hance, Ioana R., Morrison, Mark and Forsberg, Cecil W. (2005). Novel molecular features of the fibrolytic intestinal bacterium fibrobacter intestinalis not shared with fibrobacter succinogenes as determined by suppressive subtractive hybridization. Journal of Bacteriology, 187 (11), 3739-3751. doi: 10.1128/JB.187.11.3739-3751.2005

Novel molecular features of the fibrolytic intestinal bacterium fibrobacter intestinalis not shared with fibrobacter succinogenes as determined by suppressive subtractive hybridization

2005

Journal Article

The Ruminococcus albus pilA1–pilA2 locus: Expression and putative role of two adjacent pil genes in pilus formation and bacterial adhesion to cellulose

Rakotoarivonina, Harivony, Larson, Marilynn A., Morrison, Mark, Girardeau, Jean-Pierre, Gaillard-Martinie, Brigitte, Forano, Evelyne and Mosoni, Pascale (2005). The Ruminococcus albus pilA1–pilA2 locus: Expression and putative role of two adjacent pil genes in pilus formation and bacterial adhesion to cellulose. Microbiology, 151 (4), 1291-1299. doi: 10.1099/mic.0.27735-0

The Ruminococcus albus pilA1–pilA2 locus: Expression and putative role of two adjacent pil genes in pilus formation and bacterial adhesion to cellulose

2005

Journal Article

Novel microbial diversity adherent to plant biomass in the herbivore gastrointestinal tract, as revealed by ribosomal intergenic spacer analysis and rrs gene sequencing

Larue, Ross, Yu, Zhongtang, Parisi, Victoria A., Egan, Adrian R. and Morrison, Mark (2005). Novel microbial diversity adherent to plant biomass in the herbivore gastrointestinal tract, as revealed by ribosomal intergenic spacer analysis and rrs gene sequencing. Environmental Microbiology, 7 (4), 530-543. doi: 10.1111/j.1462-2920.2005.00721.x

Novel microbial diversity adherent to plant biomass in the herbivore gastrointestinal tract, as revealed by ribosomal intergenic spacer analysis and rrs gene sequencing

2005

Conference Publication

Rumen microbial genomics

Morrison, Mark and Nelson, Karen E. (2005). Rumen microbial genomics. FAO/IAEA International Symposium on Application of Gene-Based Technologies for Improving Animal Production and Health in Developing Countries, Vienna, Austria, 6-10 October, 2003. Dordrecht, The Netherlands: Springer. doi: 10.1007/1-4020-3312-5_26

Rumen microbial genomics

2005

Book Chapter

Metagenomic analysis of the microbiomes in ruminants and other herbivores

Morrison, Mark, Adams, Sarah E., Nelson, Karen F. and Attwood, Graeme T. (2005). Metagenomic analysis of the microbiomes in ruminants and other herbivores. Methods in gut microbial ecology for ruminants. (pp. 209-220) edited by Harinder P.S. Makkar and Christopher S. McSweeney. Dordrecht, The Netherlands: Springer. doi: 10.1007/1-4020-3791-0_17

Metagenomic analysis of the microbiomes in ruminants and other herbivores

2004

Journal Article

Development of an assay to quantify rumen ciliate protozoal biomass in cows using real-time PCR

Sylvester, JT, Karnati, SKR, Yu, ZT, Morrison, M and Firkins, JL (2004). Development of an assay to quantify rumen ciliate protozoal biomass in cows using real-time PCR. Journal of Nutrition, 134 (12), 3378-3384.

Development of an assay to quantify rumen ciliate protozoal biomass in cows using real-time PCR

2004

Journal Article

A novel family of carbohydrate-binding modules identified with Ruminococcus albus proteins

Xu, Qi, Morrison, Mark, Nelson, Karen E., Bayer, Edward, A., Atamna, Nof and Lamed, Raphael (2004). A novel family of carbohydrate-binding modules identified with Ruminococcus albus proteins. Febs Letters, 566 (1-3), 11-16. doi: 10.1016/j.febslet.2004.04.005

A novel family of carbohydrate-binding modules identified with Ruminococcus albus proteins

2004

Journal Article

Improved extraction of PCR-quality community DNA from digesta and fecal samples

Zhongtang, Yu and Morrison, Mark (2004). Improved extraction of PCR-quality community DNA from digesta and fecal samples. BioTechniques, 36 (5), 808-812.

Improved extraction of PCR-quality community DNA from digesta and fecal samples

2004

Journal Article

Strain specific genomic regions Of ruminococcus flavefaciens FD-1 as revealed by combinatorial random-phase genome sequencing and suppressive subtractive hybridization

Antonopoulos, Dionysios A., Nelson, Karen E., Morrison, Mark and White, Bryan A. (2004). Strain specific genomic regions Of ruminococcus flavefaciens FD-1 as revealed by combinatorial random-phase genome sequencing and suppressive subtractive hybridization. Environmental Microbiology, 6 (4), 335-346. doi: 10.1111/j.1462-2920.2004.00576.x

Strain specific genomic regions Of ruminococcus flavefaciens FD-1 as revealed by combinatorial random-phase genome sequencing and suppressive subtractive hybridization

2004

Journal Article

Comparisons of different hypervariable regions of rrs genes for use in fingerprinting of microbial communities by PCR-denaturing gradient gel electrophoresis

Yu Z. and Morrison M. (2004). Comparisons of different hypervariable regions of rrs genes for use in fingerprinting of microbial communities by PCR-denaturing gradient gel electrophoresis. Applied and Environmental Microbiology, 70 (8), 4800-4806. doi: 10.1128/AEM.70.8.4800-4806.2004

Comparisons of different hypervariable regions of rrs genes for use in fingerprinting of microbial communities by PCR-denaturing gradient gel electrophoresis

2004

Journal Article

Ruminococcus albus 8 mutants defective in cellulose degradation are deficient in two processive endocellulases, Cel48A and Cel9B, both of which possess a novel modular architecture

Bevillard, E, Goodheart, DB, Karnati, SKR, Bayer, EA, Lamed, R, Miron, J, Nelson, KE and Morrison, M (2004). Ruminococcus albus 8 mutants defective in cellulose degradation are deficient in two processive endocellulases, Cel48A and Cel9B, both of which possess a novel modular architecture. Journal of Bacteriology, 186 (1), 136-145. doi: 10.1128/JB.186.1.136-145.2004

Ruminococcus albus 8 mutants defective in cellulose degradation are deficient in two processive endocellulases, Cel48A and Cel9B, both of which possess a novel modular architecture

2003

Journal Article

The glutamine synthetase of Prevotella bryantii B(1)4 is a family III enzyme (GinN) and glutamine supports growth of mutants lacking glutamate dehydrogenase activity

Wen, ZT, Peng, LS and Morrison, M (2003). The glutamine synthetase of Prevotella bryantii B(1)4 is a family III enzyme (GinN) and glutamine supports growth of mutants lacking glutamate dehydrogenase activity. Fems Microbiology Letters, 229 (1), 15-21. doi: 10.1016/S0378-1097(03)00764-X

The glutamine synthetase of Prevotella bryantii B(1)4 is a family III enzyme (GinN) and glutamine supports growth of mutants lacking glutamate dehydrogenase activity

2003

Journal Article

Opportunities to improve fiber degradation in the rumen: microbiology, ecology, and genomics

Krause, DO, Denman, SE, Mackie, RI, Morrison, M, Rae, AL, Attwood, GT and McSweeney, CS (2003). Opportunities to improve fiber degradation in the rumen: microbiology, ecology, and genomics. Fems Microbiology Reviews, 27 (5), 663-693. doi: 10.1016/S0168-6445(03)00072-X

Opportunities to improve fiber degradation in the rumen: microbiology, ecology, and genomics