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2010 Journal Article The FibRumBa database: a resource for biologists with interests in gastrointestinal microbial ecology, plant biomass degradation, and anaerobic microbiologyMorrison, Mark, Daugherty, Sean C., Nelson, William C., Davidsen, Tanja, Nelson, Karen E. and The North American Consortium for Fibrolytic Ruminal Bacteria (2010). The FibRumBa database: a resource for biologists with interests in gastrointestinal microbial ecology, plant biomass degradation, and anaerobic microbiology. Microbial Ecology, 59 (2), 212-213. doi: 10.1007/s00248-009-9562-4 |
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2010 Conference Publication Methanogenic archaebacteria possess host-specific proteomic profiles, as revealed by two dimensional differential in gel electrophoresis (2D-DIGE) and mass spectrometry analysesGupta, R., Klieve, A. V., Morrison, M., Ouwerkerk, D. and Zhang, L.H. (2010). Methanogenic archaebacteria possess host-specific proteomic profiles, as revealed by two dimensional differential in gel electrophoresis (2D-DIGE) and mass spectrometry analyses. 15th Lorne Proteomics Symposium, Lorne VIC, Australia, 4-7 February 2010. |
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2010 Journal Article Comparative Genome Analysis of Prevotella ruminicola and Prevotella bryantii: Insights into Their Environmental NichePurushe, Janaki, Fouts, Derrick E., Morrison, Mark, White, Bryan A., Mackie, Roderick I., North American Consortium for Rumen Bacteria, Coutinho, Pedro M., Henrissat, Bernard and Nelson, Karen E. (2010). Comparative Genome Analysis of Prevotella ruminicola and Prevotella bryantii: Insights into Their Environmental Niche. Microbial Ecology, 60 (4), 721-729. doi: 10.1007/s00248-010-9692-8 |
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2010 Journal Article Dysbiosis of fecal microbiota in Crohn's disease patients as revealed by a custom phylogenetic microarrayKang, Seungha, Denman, Stuart E., Morrison, Mark, Yu, Zhongtang, Dore, Joel, Leclerc, Marion and McSweeney, Chris S. (2010). Dysbiosis of fecal microbiota in Crohn's disease patients as revealed by a custom phylogenetic microarray. Inflammatory Bowel Diseases, 16 (12), 2034-2042. doi: 10.1002/ibd.21319 |
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2010 Journal Article Occurrence and Persistence of Erythromycin Resistance Genes (erm) and Tetracycline Resistance Genes (tet) in Waste Treatment Systems on Swine FarmsChen, Jing, Michel Jr., Frederick C., Sreevatsan, Srinand, Morrison, Mark and Yu, Zhongtang (2010). Occurrence and Persistence of Erythromycin Resistance Genes (erm) and Tetracycline Resistance Genes (tet) in Waste Treatment Systems on Swine Farms. Microbial Ecology, 60 (3), 479-486. doi: 10.1007/s00248-010-9634-5 |
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2009 Conference Publication The gut microflora of individuals with ulcerative colitis (remission or mild) differs from healthy individualsChristophersen, C. T., Kang, S., Mcsweeney, C., Morrison, M., Roberts-Thomson, I. and Conlon, M. A. (2009). The gut microflora of individuals with ulcerative colitis (remission or mild) differs from healthy individuals. MALDEN: WILEY-BLACKWELL PUBLISHING, INC. |
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2009 Journal Article Recent developments in nucleic acid based techniques for use in rumen manipulationMcSweeney, Christopher, Kang, Seungha, Gagen, Emma, Davis, Carl, Morrison, Mark and Denman, Stuart (2009). Recent developments in nucleic acid based techniques for use in rumen manipulation. Revista Brasileira De Zootecnia-Brazilian Journal of Animal Science, 38 (spe), 341-351. doi: 10.1590/S1516-35982009001300034 |
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2009 Journal Article Plant biomass degradation by gut microbiomes: More of the same or something new?Morrison, Mark, Pope, Phillip B., Denman, Stuart E. and McSweeney, Christopher S. (2009). Plant biomass degradation by gut microbiomes: More of the same or something new?. Current Opinion in Biotechnology, 20 (3), 358-363. doi: 10.1016/j.copbio.2009.05.004 |
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2009 Journal Article An efficient RNA extraction method for estimating gut microbial diversity by polymerase chain reactionKang, Seungha, Denham, Stuart E., Morrison, Mark, Zhongtang, Yu and McSweeney, Chris S. (2009). An efficient RNA extraction method for estimating gut microbial diversity by polymerase chain reaction. Current Microbiology, 58 (5), 464-471. doi: 10.1007/s00284-008-9345-z |
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2009 Conference Publication Analysis of Key Reductive Acetogenesis Enzymes from Microbial Enrichments from the Cattle Rumen.Denman, S., Padmanabha, J., Gagen, E., Morrison, M. and McSweeney, C. (2009). Analysis of Key Reductive Acetogenesis Enzymes from Microbial Enrichments from the Cattle Rumen.. NEW YORK: SPRINGER. |
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2009 Journal Article Selected antimicrobial resistance during composting of manure from cattle administered sub-therapeutic antimicrobialsSharma, Ranjana, Larney, Francis J., Chen, Jing, Yanke, L. Jay, Morrison, Mark, Topp, Edward, McAllister, Tim A. and Yu, Zhongtang (2009). Selected antimicrobial resistance during composting of manure from cattle administered sub-therapeutic antimicrobials. Journal of Environmental Quality, 38 (2), 567-575. doi: 10.2134/jeq2007.0638 |
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2009 Journal Article Community composition and density of methanogens in the foregut of the Tammar wallaby (Macropus eugenii)Evans, Paul N., Hinds, Lyn A., Sly, Lindsay I., McSweeney, Christopher S., Morrison, Mark and Wright, Andre-Denis G. (2009). Community composition and density of methanogens in the foregut of the Tammar wallaby (Macropus eugenii). Applied and Environmental Microbiology, 75 (8), 2598-2602. doi: 10.1128/AEM.02436-08 |
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2009 Conference Publication Application of numerical ecology methods to microarray data reveals obscured patterns in the mucosa-associated microbial community of the human colorectumDe Carcer, D. Aguirre, O Cuiv, P., Wang, T., Reverter, T., Worthley, D., Whitehall, V., Klaassens, E. S., Kang, S., Denman, S., Young, G., Legget, B., McSweeney, C. and Morrison, M. (2009). Application of numerical ecology methods to microarray data reveals obscured patterns in the mucosa-associated microbial community of the human colorectum. Australia and New Zealand Medical and Surgical Gastrointestinal Week 2009, Sydney, NSW Australia, 21‐24 October 2009. Richmond, VIC Australia: Wiley-Blackwell Publishing Asia. |
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2009 Conference Publication Characterization and development of a systems-level understanding of microbial metabolism in the foregut microbiome of the Tammar wallaby (Macropus eugenii).Pope, P., Denman, S., Tringe, S., Hinds, L., Hugenholtz, P., McSweeney, C. and Morrison, M. (2009). Characterization and development of a systems-level understanding of microbial metabolism in the foregut microbiome of the Tammar wallaby (Macropus eugenii).. 2009 Conference on Gastrointestinal Function, Chicago, USA, 20-22 April, 2009. New York, NY, United States: Springer. doi: 10.1007/s00248-009-9496-x |
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2009 Book Chapter The gut microbiome: current understanding and future perspectivesYu, Zhongtang and Morrison, Mark (2009). The gut microbiome: current understanding and future perspectives. Food-borne microbes: Shaping the host ecosystem. (pp. 19-40) edited by Lee-Ann Jaykus, Hua H. Wang and Larry S. Schlesinger. Washington, D.C., USA: ASM Press. |
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2009 Journal Article Rumen ciliated protozoa decrease generation time and adjust 18S ribosomal DNA copies to adapt to decreased transfer interval, starvation, and monensinSylvester, J.T., Karnati, S.K.R., Dehority, B.A., Morrison, M., Smith, G.L., St-Pierre, N.R. and Firkins, J.L. (2009). Rumen ciliated protozoa decrease generation time and adjust 18S ribosomal DNA copies to adapt to decreased transfer interval, starvation, and monensin. Journal of Dairy Science, 92 (1), 256-269. doi: 10.3168/jds.2008-1417 |
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2008 Journal Article Cell surface enzyme attachment is mediated by family 37 carbohydrate-binding modules, unique to Ruminococcus albusEzer, Anat, Matalon, Erez, Jindou, Sadanari, Borovok, Ilya, Atamna, Nof, Zhongtang, Yu, Morrison, Mark, Bayer, Edward A. and Lamed, Raphael (2008). Cell surface enzyme attachment is mediated by family 37 carbohydrate-binding modules, unique to Ruminococcus albus. Journal of Bacteriology, 190 (24), 8220-8222. doi: 10.1128/JB.00609-08 |
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2008 Journal Article Technical note: Occurrence in fecal microbiota of genes conferring resistance to both macrolide-lincosamide-streptogramin B and tetracyclines concomitant with feeding of beef cattle with tylosinChen, J., Fluharty, F.L., St-Pierre, N., Morrison, M. and Yu, Z. (2008). Technical note: Occurrence in fecal microbiota of genes conferring resistance to both macrolide-lincosamide-streptogramin B and tetracyclines concomitant with feeding of beef cattle with tylosin. Journal of Animal Science, 86 (9), 2385-2391. doi: 10.2527/jas.2007-0705 |
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2008 Journal Article Evaluations of different hypervariable regions of archaeal 16S rRNA Genes in profiling of methanogens by archaea-specific PCR and denaturing gradient gel electrophoresisZhongtang, Yu, García-González, Rubén, Schanbacher, Floyd L. and Morrison, Mark (2008). Evaluations of different hypervariable regions of archaeal 16S rRNA Genes in profiling of methanogens by archaea-specific PCR and denaturing gradient gel electrophoresis. Applied and Environmental Microbiology, 74 (3), 889-893. doi: 10.1128/AEM.00684-07 |
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2008 Journal Article Analyses of Bifidobacterium, Lactobacillus, and total bacterial populations in healthy volunteers consuming calcium gluconate by denaturing gradient gel electrophoresis and real-time PCRAnderson, Kyle, Yu, Zhongtang, Chen, Jing, Jenkins, Julie, Courtney, Polly and Morrison, Mark (2008). Analyses of Bifidobacterium, Lactobacillus, and total bacterial populations in healthy volunteers consuming calcium gluconate by denaturing gradient gel electrophoresis and real-time PCR. International Journal of Probiotics and Prebiotics, 3 (1), 31-36. |
