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2011 Conference Publication Prospective Evaluation of the Mucosa-Associated Microbiota After “Curative” Crohn's Resection Reveals Incomplete Return to “Normal” and Association of Bacteroides With Protection From Disease RecurrenceDe Cruz, Peter P., Kang, Seungha, Prideaux, Lani, McSweeney, Chris, Morrison, Mark and Kamm, Michael A. (2011). Prospective Evaluation of the Mucosa-Associated Microbiota After “Curative” Crohn's Resection Reveals Incomplete Return to “Normal” and Association of Bacteroides With Protection From Disease Recurrence. 2011 Digestive Disease Week , Chicago, Illinois, 7-10 May 2011. Philadelphia, PA, United States: Elsevier. doi: 10.1016/s0016-5085(11)61325-5 |
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2011 Journal Article Phylogenetic diversity of bacterial communities in bovine rumen as affected by diets and microenvironmentsKim, Minseok, Morrison, Mark and Yu, Zhongtang (2011). Phylogenetic diversity of bacterial communities in bovine rumen as affected by diets and microenvironments. Folia Microbiologica, 56 (5), 453-458. doi: 10.1007/s12223-011-0066-5 |
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2011 Conference Publication The Role of Gut Microflora and Autoreactive CD4+T Cells in the Development of Spondyloarthritis and Inflammatory Bowel Disease in Beta-Glucan-Treated SKG MiceRuutu, Merja, Velasco, Jared, Aguirre, Daniel, Benham, Helen, Morrison, Mark, McGuckin, Michael and Thomas, Ranjeny (2011). The Role of Gut Microflora and Autoreactive CD4+T Cells in the Development of Spondyloarthritis and Inflammatory Bowel Disease in Beta-Glucan-Treated SKG Mice. 75th Annual Scientific Meeting of the American College of Rheumatology/46th Annual Scientific Meeting of the Association of Rheumatology Health Professionals, Chicago, IL, United States, 4-9 November 2011. Hoboken, NJ, United States: John Wiley & Sons. doi: 10.1002/art.33310 |
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2011 Journal Article Highlighting new phylogenetic specificities of Crohn's disease microbiotaMondot, S., Kang, S., Furet, J.P., Aguirre De Carcer, D., McSweeney, C., Morrison, M., Marteau, P., Dore, J. and Leclerc, M. (2011). Highlighting new phylogenetic specificities of Crohn's disease microbiota. Inflammatory Bowel Diseases, 17 (1), 185-192. doi: 10.1002/ibd.21436 |
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2011 Book Chapter Selection and sequencing of strains as references for human microbiome studiesKlaassens, Eline S., Morrison, Mark and Highlander, Sarah K. (2011). Selection and sequencing of strains as references for human microbiome studies. Metagenomics of the Human Body. (pp. 79-90) New York, NY United States: Springer. doi: 10.1007/978-1-4419-7089-3_5 |
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2011 Conference Publication Microbiome shifts with 6-thioguanine provide insights about IBD and its treatmentDe Carcer, D. Aguirre, Oancea, I., Das, I., Mcguckin, M., Duley, J., Morrison, M. and Florin, T. (2011). Microbiome shifts with 6-thioguanine provide insights about IBD and its treatment. Australian Gastroenterology Week 2011, South Bank, QLD, Australia, 12–15 September 2011. MALDEN: WILEY-BLACKWELL. doi: 10.1111/j.1440-1746.2011.06820.x |
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2011 Conference Publication Insight Into Differential Gene Expression of Enterococcus Faecium, an IBD Associated Bacterium, Using RNA-SeqKlaassens, Eline S., Wang, Tingting, Tolls, Elisabeth H., McWilliam, Sean, Zhao, Li-Ping, Ó Cuív, Páraic and Morrison, Mark (2011). Insight Into Differential Gene Expression of Enterococcus Faecium, an IBD Associated Bacterium, Using RNA-Seq. Conference on Digestive Disease Week 2011, Chicago Il, May 07-10, 2011. W B SAUNDERS CO-ELSEVIER INC. |
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2011 Journal Article Biochemical characterization and relative expression levels of multiple carbohydrate esterases of the xylanolytic rumen bacterium Prevotella ruminicola 23 grown on an ester-enriched substrateKabel, Mirjam A., Yeoman, Carl J., Han, Yejun, Dodd, Dylan, Abbas, Charles A., de Bont, Jan A. M., Morrison, Mark, Cann, Isaac K. O. and Mackie, Roderick I. (2011). Biochemical characterization and relative expression levels of multiple carbohydrate esterases of the xylanolytic rumen bacterium Prevotella ruminicola 23 grown on an ester-enriched substrate. Applied and Environmental Microbiology, 77 (16), 5671-5681. doi: 10.1128/AEM.05321-11 |
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2011 Journal Article Draft genome sequence of Turicibacter sanguinis PC909, isolated from human fecesO Cuív, Paraic, Klaassens, Eleine S., Durkin, A. Scott, Harkins, Derek M., Foster, Les, McCorrison, Jamison, Torralba, Manolito, Nelson, Karen E. and Morrison, Mark (2011). Draft genome sequence of Turicibacter sanguinis PC909, isolated from human feces. Journal of Bacteriology, 193 (5), 1288-1289. doi: 10.1128/JB.01328-10 |
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2011 Journal Article Status of the phylogenetic diversity census of ruminal microbiomesKim, Minseok, Morrison, Mark and Yu, Zhongtang (2011). Status of the phylogenetic diversity census of ruminal microbiomes. FEMS Microbiology Ecology, 76 (1), 49-63. doi: 10.1111/j.1574-6941.2010.01029.x |
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2010 Journal Article Functional gene analysis suggests different acetogen populations in the Bovine Rumen and Tammar Wallaby ForestomachGagen, Emma J., Denman, Stuart E., Padmanabha, Jagadish, Zadbuke, Someshwar, Al Jassim, Rafat, Morrison, Mark and McSweeney, Christopher S. (2010). Functional gene analysis suggests different acetogen populations in the Bovine Rumen and Tammar Wallaby Forestomach. Applied and Environmental Microbiology, 76 (23), 7785-7795. doi: 10.1128/AEM.01679-10 |
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2010 Journal Article Adaptation to herbivory by the Tammar wallaby includes bacterial and glycoside hydrolase profiles different from other herbivoresPope, P. B., Denman, S. E., Jones, M., Tringe, S. G., Barry, K., Malfatti, S. A., McHardy, A. C., Cheng, J. F., Hugenholtz, P., McSweeney, C. S. and Morrison, M. (2010). Adaptation to herbivory by the Tammar wallaby includes bacterial and glycoside hydrolase profiles different from other herbivores. Proceedings of the National Academy of Sciences of the United States of America, 107 (33), 14793-1-14798-6. doi: 10.1073/pnas.1005297107 |
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2010 Book Chapter Production and Utilization of Methane Biogas as Renewable FuelYu, Zhongtang, Morrison, Mark and Schanbacher, Floyd L. (2010). Production and Utilization of Methane Biogas as Renewable Fuel. Biomass to Biofuels: Strategies for Global Industries. (pp. 403-433) Oxford, UK: Blackwell Publishing Ltd.. doi: 10.1002/9780470750025.ch20 |
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2010 Journal Article Comparative Genome Analysis of Prevotella ruminicola and Prevotella bryantii: Insights into Their Environmental NichePurushe, Janaki, Fouts, Derrick E., Morrison, Mark, White, Bryan A., Mackie, Roderick I., North American Consortium for Rumen Bacteria, Coutinho, Pedro M., Henrissat, Bernard and Nelson, Karen E. (2010). Comparative Genome Analysis of Prevotella ruminicola and Prevotella bryantii: Insights into Their Environmental Niche. Microbial Ecology, 60 (4), 721-729. doi: 10.1007/s00248-010-9692-8 |
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2010 Journal Article Dysbiosis of fecal microbiota in Crohn's disease patients as revealed by a custom phylogenetic microarrayKang, Seungha, Denman, Stuart E., Morrison, Mark, Yu, Zhongtang, Dore, Joel, Leclerc, Marion and McSweeney, Chris S. (2010). Dysbiosis of fecal microbiota in Crohn's disease patients as revealed by a custom phylogenetic microarray. Inflammatory Bowel Diseases, 16 (12), 2034-2042. doi: 10.1002/ibd.21319 |
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2010 Journal Article Occurrence and Persistence of Erythromycin Resistance Genes (erm) and Tetracycline Resistance Genes (tet) in Waste Treatment Systems on Swine FarmsChen, Jing, Michel Jr., Frederick C., Sreevatsan, Srinand, Morrison, Mark and Yu, Zhongtang (2010). Occurrence and Persistence of Erythromycin Resistance Genes (erm) and Tetracycline Resistance Genes (tet) in Waste Treatment Systems on Swine Farms. Microbial Ecology, 60 (3), 479-486. doi: 10.1007/s00248-010-9634-5 |
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2010 Conference Publication A comparative genomics analysis of rumen methanogensAltermann, E., Kelly, W., Leahy, S., Lambie, S., Janssen, P. H., Zhang, L., Klieve, A., Ouwerkerk, D., Morrison, M. and Attwood, G. (2010). A comparative genomics analysis of rumen methanogens. Greenhouse Gases and Animal Agriculture Conference 2010, Banff, Alberta, Canada, 3-8 October , 2010. |
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2010 Conference Publication Out of the black box and back to the future: New frontiers and challenges for rumen microbiology to advance animal growth and development.Morrison, M. (2010). Out of the black box and back to the future: New frontiers and challenges for rumen microbiology to advance animal growth and development.. Growth and Development Symposium: Intestinal Development and Growth, Unknown, 2010. NEW YORK: ELSEVIER SCIENCE INC. |
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2010 Conference Publication T1805 Analysis of the Mucosal Microbiota From Inflammatory Bowel Disease Biopsy Tissues Using a Custom 16s rRNA Based Phylogenetic MicroarrayKang, Seungha, Gupta, Arun, Wagner, Josef, Macrae, Finlay A., Morrison, Mark and McSweeney, Chris (2010). T1805 Analysis of the Mucosal Microbiota From Inflammatory Bowel Disease Biopsy Tissues Using a Custom 16s rRNA Based Phylogenetic Microarray. 2010 Digestive Disease Week, New Orleans, Louisiana, 1-5 May 2010. Philadelphia, PA, United States: Elsevier. doi: 10.1016/s0016-5085(10)62683-2 |
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2010 Journal Article The FibRumBa database: a resource for biologists with interests in gastrointestinal microbial ecology, plant biomass degradation, and anaerobic microbiologyMorrison, Mark, Daugherty, Sean C., Nelson, William C., Davidsen, Tanja, Nelson, Karen E. and The North American Consortium for Fibrolytic Ruminal Bacteria (2010). The FibRumBa database: a resource for biologists with interests in gastrointestinal microbial ecology, plant biomass degradation, and anaerobic microbiology. Microbial Ecology, 59 (2), 212-213. doi: 10.1007/s00248-009-9562-4 |
