Emeritus Professor Kaye Basford
Emeritus Professor

Kaye Basford

Email: 

Background

Professor of Biometry

Research Interests:

Research at the interface between applied statistics and quantitative genetics with extensive publications on the analysis and interpretation of multi-way data from large-scale plant breeding experiments, particularly those involving genotype by environment interaction. Theory and application of pattern analysis - clustering and ordination procedures - appropriate for data collected from plant breeding experiments and/or stored in germplasm databases. Analysis, interpretation and impact of genotype x environment interaction for primary economic plant attributes (yield and quality) and data management, integration and analysis (bioinformatics).

Other Activities:

Past President of the International Biometric Society (2010-11) and the Statistical Society of Australia Incorporated (2005-07). Life member of the Statistical Society of Australia Incorporated (2010). Australian Medal for Agricultural Science from the Australian Institute of Agricultural Science and Technology (1998).

Previous Head of the School of Land, Crop and Food Sciences (2001-10).

Fellow of the Australian Academy of Technological Sciences and Engineering, Australian Institute of Company Directors, Australian Institute of Agricultural Science and Technology and Institute of Statisticians (which has merged with the Royal Statistical Society).

Member of the Board of Trustees of the International Rice Research Institute (2013-15).

Availability

Emeritus Professor Kaye Basford is:
Available for supervision
Media expert

Fields of research

Crop and pasture production Forestry sciences Statistics

Qualifications

  • Bachelor (Honours) of Science (Advanced), The University of Queensland
  • Masters (Coursework), The University of Queensland
  • Doctor of Philosophy, The University of Queensland
  • Australian Academy of Technological Sciences and Engineering, Australian Academy of Technological Sciences and Engineering
  • Australian Institute Of Agricultural Science and Technology, Australian Institute Of Agricultural Science and Technology
  • Australian Institute of Company Directors, Australian Institute of Company Directors
  • Queensland Academy of Arts and Sciences, Queensland Academy of Arts and Sciences

Search Professor Kaye Basford’s works on UQ eSpace

233 works between 1976 and 2022
All (233) Journal Article (125) Book Chapter (10) Conference Publication (91) Book (2) Other Outputs (5)

41 - 60 of 233 works

2011

Conference Publication

IBS: Transforming our governance

Basford, Kaye E. (2011). IBS: Transforming our governance. Oxford, U.K.: Wiley-Blackwell Publishing. doi: 10.1111/j.1541-0420.2011.01670.x

IBS: Transforming our governance

2011

Journal Article

Identifying deployment zones for Eucalyptus camaldulensis × E. globulus and × E. grandis hybrids using factor analytic modelling of genotype by environment interaction

Hardner, C, Dieters, M, DeLacy, I, Neal, J, Fletcher, S, Dale, G and Basford, K (2011). Identifying deployment zones for Eucalyptus camaldulensis × E. globulus and × E. grandis hybrids using factor analytic modelling of genotype by environment interaction. Australian Forestry, 74 (1), 30-35. doi: 10.1080/00049158.2011.10676343

Identifying deployment zones for Eucalyptus camaldulensis × E. globulus and × E. grandis hybrids using factor analytic modelling of genotype by environment interaction

2011

Conference Publication

Status Analysis: projecting genotype performance into long-term environment discrimination space

DeLacy, I. H., Arief, V. N. and Basford, K. E. (2011). Status Analysis: projecting genotype performance into long-term environment discrimination space. Australasian Applied Statistical Conference, Cairns, Australia, 11-15 July 2011.

Status Analysis: projecting genotype performance into long-term environment discrimination space

2011

Conference Publication

Extending status analysis to project genotype performance into long-term environment discrimination space –an example

DeLacy, I. H., Arief, V. N., Payne, T., Braun, H.-J. and Basford, K. E. (2011). Extending status analysis to project genotype performance into long-term environment discrimination space –an example. Wheat Breeding Assembly, Perth AUSTRALIA, 24 - 26 August 2011.

Extending status analysis to project genotype performance into long-term environment discrimination space –an example

2011

Conference Publication

Relationships among markers based on haplotype combinations in populations of related homozygous genotypes

Arief, V. N., DeLacy, I. H., Wenzl, P., Basford, K. E., Driesigacker, S., Crossa, J. and Dieters, M. J. (2011). Relationships among markers based on haplotype combinations in populations of related homozygous genotypes. Wheat Breeding Assembly, Perth, Australia, 24 - 26 August 2011.

Relationships among markers based on haplotype combinations in populations of related homozygous genotypes

2010

Journal Article

Patterns of genotype-by-environment interaction in diameter at breast height at age 3 for eucalypt hybrid clones grown for reafforestation of lands affected by salinity

Hardner, Craig M., Dieters, Mark, Dale, Glenn, DeLacy, Ian and Basford, Kaye E. (2010). Patterns of genotype-by-environment interaction in diameter at breast height at age 3 for eucalypt hybrid clones grown for reafforestation of lands affected by salinity. Tree Genetics & Genomes, 6 (6), 833-851. doi: 10.1007/s11295-010-0295-9

Patterns of genotype-by-environment interaction in diameter at breast height at age 3 for eucalypt hybrid clones grown for reafforestation of lands affected by salinity

2010

Journal Article

Research the key to world food security

Basford, Kaye (2010). Research the key to world food security. ATSE Focus, 160, 36-37.

Research the key to world food security

2010

Conference Publication

The use of pedigree, molecular marker and phenotypic data to investigate population structures in 25 years of the CIMMYT global wheat breeding program

Arief, Vivi N., DeLacy, Ian H., Crossa, Jose, Dieters, Mark J. and Basford, Kaye E. (2010). The use of pedigree, molecular marker and phenotypic data to investigate population structures in 25 years of the CIMMYT global wheat breeding program. Eighth International Wheat Conference, St Petersburg, Russia, 1 - 4 June 2010. St. Petersburg, Russia: Vavilov Research Institute of Plant Industry.

The use of pedigree, molecular marker and phenotypic data to investigate population structures in 25 years of the CIMMYT global wheat breeding program

2010

Conference Publication

ImmunoGrid: Towards agent-based simulations of the human immune system at a natural scale

Halling-Brown, Mark, Pappalardo, Francesco, Rapin, Nicolas, Zhang, Ping, Alemani, David, Emerson, Andrew, Castiglione, Filippo, Duroux, Patrice, Pennisi, Marzio, Miotto, Olivo, Churchill, Daniel, Rossi, Elda, Moss, David S., Sansom, Clare E., Bernaschi, Massimo, Lefranc, Marie-Paule, Brunak, Soren, Lund, Ole, Motta, Santo, Lollini, Pier-Luigi, Murgo, Annalisa, Palladini, Arianna, Basford, Kaye E., Brusic, Vladimir and Shepherd, Adrian J. (2010). ImmunoGrid: Towards agent-based simulations of the human immune system at a natural scale. 4th International Congress on Computational Bioengineering/1st European Symposium on Biomedical Integrative Research, Bertinoro, Italy, 16-18 September 2009. London, U.K.: Royal Society. doi: 10.1098/rsta.2010.0067

ImmunoGrid: Towards agent-based simulations of the human immune system at a natural scale

2010

Conference Publication

The use of pedigree, molecular marker and phenotypic data to investigate population structures in 25 years of the CIMMYT global wheat breeding program

Arief, Vivi N., DeLacy, Ian H., Crossa, Jose, Dieters, Mark J. and Basford, Kaye E. (2010). The use of pedigree, molecular marker and phenotypic data to investigate population structures in 25 years of the CIMMYT global wheat breeding program. 8th International Wheat Conference, St. Petersburg, Russia, 1-4 June 2010. St. Petersburg, Russia: N.I. Vavilov Research Institute of Plant Industry (VIR).

The use of pedigree, molecular marker and phenotypic data to investigate population structures in 25 years of the CIMMYT global wheat breeding program

2010

Conference Publication

Construction and three-way ordination of the Wheat Phenome Atlas

Arief, V. N., Kroonenberg, P. M., DeLacy, I. H., Dieters, M. J., Crossa, J. and Basford, K. E. (2010). Construction and three-way ordination of the Wheat Phenome Atlas. Tenth Islamic Countries Conference on Statistical Sciences (ICCS-X), Cairo, Egypt, 20-23 December 2010. Lahor, Pakistan: The Islamic Countries Society of Statistical Sciences (ISOSS).

Construction and three-way ordination of the Wheat Phenome Atlas

2010

Journal Article

Construction and three-way ordination of the Wheat Phenome Atlas

Arief, V. N., Kroonenberg, P. M., DeLacy, I. H., Dieters, M. J., Crossa, J., Dreisigacker, S., Braun, H. -J. and Basford, K. E. (2010). Construction and three-way ordination of the Wheat Phenome Atlas. Journal of Applied Probability and Statistics, 5 (1), 95-118.

Construction and three-way ordination of the Wheat Phenome Atlas

2010

Conference Publication

Future tools for association mapping in crop plants

Duran, Chris, Eales, Dominic, Marshall, Daniel, Imelfort, Michael, Stiller, Jiri, Berkman, Paul J., Clark, Terry, McKenzie, Megan, Appleby, Nikki, Batley, Jacqueline, Basford, Kaye and Edwards, David (2010). Future tools for association mapping in crop plants. International Conference on Exploiting Genome Wide Association in Oilseed Brassicas - A Model for genetic Improvement of Major OECD Crops for Sustainable Future Farming, Perth, WA, Australia, 9 - 12 November 2009. Ottawa, ON, Canada: N R C Research Press. doi: 10.1139/G10-057

Future tools for association mapping in crop plants

2010

Conference Publication

Three-way ordination of rust GWAS using 25 years of one of CIMMYT global wheat breeding programs

Arief, Vivi N., Kroonenberg, Pieter M., DeLacy, Ian H., Dieters, Mark J., Crossa, Jose, Dreisigacker, Susanne, Braun, Hans-J. and Basford, Kaye E. (2010). Three-way ordination of rust GWAS using 25 years of one of CIMMYT global wheat breeding programs. Borlaug Global Rust Initiative 2010 Technical Workshops, St. Petersburg, Russia, 30-31 May 2010.

Three-way ordination of rust GWAS using 25 years of one of CIMMYT global wheat breeding programs

2009

Journal Article

Variation in adzuki bean (Vigna angularis) germplasm grown in China (vol 49:3 (774) 2009)

Redden, Robert J., Basford, Kaye E., Kroonenberg, Pieter M., Islam, F.M. Amirul, Ellis, Rodney, Wang, Shumin, Cao, Yongsheng, Zong, Xuxiao and Wang, Xiaoming (2009). Variation in adzuki bean (Vigna angularis) germplasm grown in China (vol 49:3 (774) 2009). Crop Science, 49 (6), 2414-2414. doi: 10.2135/cropsci2008.03.0175er

Variation in adzuki bean (Vigna angularis) germplasm grown in China (vol 49:3 (774) 2009)

2009

Journal Article

Variation in adzuki bean (Vigna angularis) germplasm grown in China

Redden, R.J., Basford, K.E., Kroonenberg, P. M., Islam, F.M.A., Ellis, R., Wang, S., Yongsheng, C., Zong, X. and Wang, X. (2009). Variation in adzuki bean (Vigna angularis) germplasm grown in China. Crop Science, 49 (3), 771-782. doi: 10.2135/cropsci2008.03.0175

Variation in adzuki bean (Vigna angularis) germplasm grown in China

2009

Journal Article

ImmunoGrid, an integrative environment for large-scale simulation of the immune system for vaccine discovery, design and optimization

Pappalardo, Francesco, Halling-Brown, Mark D., Rapin, Nicolas, Zhang, Ping, Alemani, Davide, Emerson, Andrew, Paci, Paola, Duroux, Patrice, Pennisi, Marzio, Palladini, Arianna, Miotto, Olivio, Churchill, Daniel, Rossi, Elda, Shepherd, Adrian J., Moss, David S., Castiglione, Filippo, Bernaschi, Massimo, Lefranc, Marie-Paule, Brunak, Soren, Motta, Santo, Lollini, Pier-Luigi, Basford, Kaye E. and Brusic, Vladimir (2009). ImmunoGrid, an integrative environment for large-scale simulation of the immune system for vaccine discovery, design and optimization. Briefings in Bioinformatics, 10 (3), 330-340. doi: 10.1093/bib/bbp014

ImmunoGrid, an integrative environment for large-scale simulation of the immune system for vaccine discovery, design and optimization

2009

Conference Publication

Identifying deployment zones for Eucalyptus camaldulensis x E. globulus and x E. grandis hybrids using factor analytic modelling of genotype by environment interaction

Hardner, C., Dieters, M., Delacy, I., Neal, J., Fletcher, S., Dale, G. and Basford, K. (2009). Identifying deployment zones for Eucalyptus camaldulensis x E. globulus and x E. grandis hybrids using factor analytic modelling of genotype by environment interaction. Australasian Forest Genetics Conference, Perth Western Australia, 20-22 April, 2009. Forest Products Commission.

Identifying deployment zones for Eucalyptus camaldulensis x E. globulus and x E. grandis hybrids using factor analytic modelling of genotype by environment interaction

2009

Conference Publication

Ordination of marker-trait association profiles from long-term international wheat trials

Arief, V. N., Delacy, I. H., Crossa, J., Kroonenberg, P. M., Dieters, M. J. and Basford, K. E. (2009). Ordination of marker-trait association profiles from long-term international wheat trials. Biometrics 2009: Biometrics on the Lake. The International Biometric Society Australasian Region Conference, Taupo, New Zealand, 29 November-3 December 2009. International Biometric Society Australasian Region (IBS AR).

Ordination of marker-trait association profiles from long-term international wheat trials

2009

Conference Publication

An application of wheat phenome atlas using three-way principal component analysis

Arief, Vivi N., Kroonenberg, Pieter M., DeLacy, Ian H., Dieters, Mark J., Crossa, Jose and Basford, Kaye E. (2009). An application of wheat phenome atlas using three-way principal component analysis. OECD Genome Association Oz09, Perth, Australia, 9-12 November 2009.

An application of wheat phenome atlas using three-way principal component analysis

Current funding

  • 2023 - 2027
    Analytics for the Australian Grains Industry (AAGI)
    Grains Research & Development Corporation
    Open grant

Past funding

  • 2021 - 2023
    Dusky Flathead and Sand Whiting Stock Assessment
    Queensland Department of Agriculture and Fisheries
    Open grant
  • 2018 - 2021
    Mainstreaming research in Myanmar's Agricultural and Veterinary Universities
    Australian Centre for International Agricultural Research
    Open grant
  • 2018 - 2020
    Cooperative Development of QU-GENE Simulation Platform for cross-pollinating Forage Species in Open Source Format
    AgResearch
    Open grant
  • 2016 - 2017
    Cooperative Development of QU-GENE Simulation Platform for cross-pollinating Forage Species in Open Source Format
    AgResearch
    Open grant
  • 2014 - 2024
    Demand-led plant variety design for emerging markets in Africa Fund
    Australian Centre for International Agricultural Research
    Open grant
  • 2008 - 2009
    The wheat phenome atlas and phenome atlas toolbox
    International Maize and Wheat Improvement Centre
    Open grant
  • 2007 - 2010
    Site factors and genotype-site interaction affecting growth of eucalypt hybrids bred for commercial agro-forestry as a salinity management tool.
    ARC Linkage Projects
    Open grant
  • 2003
    CIMMYT/UQ Breeding, Simulation and Germplasm Exchange Workshop
    Grains Research & Development Corporation
    Open grant
  • 2003 - 2014
    ARC/GRDC Australian Centre for Plant Functional Genomics (Administered by the University of Adelaide)
    University of Adelaide
    Open grant
  • 2003
    Classification of Microarray Gene-Expression Data
    ARC Discovery Projects
    Open grant
  • 2002
    Travel grant - Staff at UQ to attend the 12th Australiasian Plant Breeding Conference, Perth, September 2002
    Grains Research & Development Corporation
    Open grant
  • 2002 - 2004
    AWCMMP - Component: Pedigree-based genome mapping for marker-assisted selection and recurrent parent recovery in wheat and barley
    Grains Research & Development Corporation
    Open grant
  • 2001
    Travel Grant - Staff to attend 10th Australian wheat Breeding Assembly, Mildura
    Grains Research & Development Corporation
    Open grant
  • 2001 - 2003
    Development of a genetic method to estimate effective spawner numbers in tiger prawn fisheries
    Queensland Department Primary Industries
    Open grant
  • 2001 - 2005
    Development of ICIS for Australian wheat breeding programs
    Grains Research & Development Corporation
    Open grant
  • 2001 - 2005
    Enhanced evaluation of CIMMYT germplasm for Australia (Continuation ) - Australian Component
    Grains Research & Development Corporation
    Open grant
  • 2000 - 2002
    Classification of Multiply Observed Features in Terms of Fitted Densities
    ARC Australian Research Council (Large grants)
    Open grant
  • 1999 - 2005
    Development of breeder-friendly computer software
    CRC for Molecular Plant Breeding
    Open grant
  • 1999 - 2005
    A Strategic framework to model CIMMYT wheat breeding programs with application to Australia
    Grains Research & Development Corporation
    Open grant
  • 1999 - 2001
    Analysis of sugarcane productivity trends in the wet tropics at a district level
    Sugar Research & Development Corporation
    Open grant
  • 1998 - 2002
    Selection to accomodate genotype-by-environment interactions in the Northern Wheat Improvement Program.
    Grains Research & Development Corporation
    Open grant
  • 1997 - 1998
    Evaluation and multi-variate analysis of common bean germplasm
    Queensland Department Primary Industries
    Open grant
  • 1997 - 1999
    The Analysis of Plant Adaptation Data with Emphasis on Unbalanced Sets
    ARC Australian Research Council (Large grants)
    Open grant
  • 1996 - 1999
    Optimisation of experimental design and analysis for variety trials to maximise genetic gain
    Sugar Research & Development Corporation
    Open grant
  • 1996 - 2001
    Statistical training and support for plant variety evaluation
    Grains Research & Development Corporation
    Open grant
  • 1996 - 1997
    Training in statistical methods in plant variety evaluation
    Sugar Research & Development Corporation
    Open grant
  • 1996 - 1998
    The design of field experiments when the data are spatially dependent
    ARC Australian Research Council (Large grants)
    Open grant
  • 1995 - 2001
    Germplasm enhancement program to develop high yield and high protein parents for the northern region wheat breeding programs
    Queensland Department Primary Industries
    Open grant

Availability

Emeritus Professor Kaye Basford is:
Available for supervision

Before you email them, read our advice on how to contact a supervisor.

Supervision history

Current supervision

  • Doctor Philosophy

    Using statistical genetics approaches to gain insight into patterns of variation in complex traits

    Principal Advisor

    Other advisors: Professor Geoffrey McLachlan, Dr Vivi Arief, Dr Quan Nguyen

  • Doctor Philosophy

    Examination of combined selection for grain yield and grain protein from wheat recurrent selection programs

    Principal Advisor

  • Doctor Philosophy

    Genetic control of physiological traits in bread wheat in response to increased temperature in MAGIC population.

    Associate Advisor

    Other advisors: Dr Vijaya Singh, Dr Vivi Arief

Completed supervision

Enquiries

Contact Emeritus Professor Kaye Basford directly for media enquiries about:

  • Agricultural science and statistics
  • Bioinformatics
  • Biology and statistics
  • Biometrics
  • Breeding - plants
  • Plant breeding
  • Statistics in agricultural science
  • Statistics in biology

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