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2024 Journal Article Genetic diversity assessment of cucumber landraces using molecular signaturesIftikhar, Muhammad Sarmad, Naseer Cheema, Hafiza Masooma, Khan, Asif Ali, DeLacy, Ian Henson and Basford, Kaye Enid (2024). Genetic diversity assessment of cucumber landraces using molecular signatures. BMC Genomics, 25 (1) 1046. doi: 10.1186/s12864-024-10958-z |
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2022 Journal Article Visualising the pattern of long‐term genotype performance by leveraging a genomic prediction modelArief, Vivi N., DeLacy, Ian H., Payne, Thomas and Basford, Kaye E. (2022). Visualising the pattern of long‐term genotype performance by leveraging a genomic prediction model. Australian and New Zealand Journal of Statistics, 64 (2), 297-312. doi: 10.1111/anzs.12362 |
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2021 Journal Article Deterministic and stochastic modelling of impacts from genomic selection and phenomics on genetic gain for perennial ryegrass dry matter yieldJahufer, M. Z. Z., Arojju, Sai Krishna, Faville, Marty J., Ghamkhar, Kioumars, Arief, Vivi, Yang, Wen-Hsi, Luo, Dongwen, Sun, Mingzhu, DeLacy, Ian H., Griffiths, Andrew G., Eady, Colin, Clayton, Will, Stewart, Alan V., George, Richard M., Hoyos-Villegas, Valerio, Basford, Kaye E. and Barrett, Brent (2021). Deterministic and stochastic modelling of impacts from genomic selection and phenomics on genetic gain for perennial ryegrass dry matter yield. Scientific Reports, 11 (1) 13265, 1-18. doi: 10.1038/s41598-021-92537-w |
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2020 Journal Article Maternal and infant predictors of infant mortality in California, 2007–2015Ratnasiri, Anura W. G., Lakshminrusimha, Satyan, Dieckmann, Ronald A., Lee, Henry C., Gould, Jeffrey B., Parry, Steven S., Arief, Vivi N., DeLacy, Ian H., DiLibero, Ralph J. and Basford, Kaye E. (2020). Maternal and infant predictors of infant mortality in California, 2007–2015. PloS One, 15 (8) e0236877, e0236877. doi: 10.1371/journal.pone.0236877 |
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2020 Journal Article Smoking during pregnancy and adverse birth and maternal outcomes in California, 2007 to 2016Ratnasiri, Anura W. G., Gordon, Lauren, Dieckmann, Ronald A., Lee, Henry C., Parry, Steven S., Arief, Vivi N., DeLacy, Ian H., Lakshminrusimha, Satyan, DiLibero, Ralph J. and Basford, Kaye E. (2020). Smoking during pregnancy and adverse birth and maternal outcomes in California, 2007 to 2016. American Journal of Perinatology, 37 (13), 1364-1376. doi: 10.1055/s-0039-1693689 |
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2019 Journal Article Beneficial soil profile differences associated with tropical grass pastures on sodic texture contrast soils in Northern New South WalesBanks, Robert, Wendling, Laura, Basford, Kaye, Ringrose-Voase, Anthony and Banks, Vera (2019). Beneficial soil profile differences associated with tropical grass pastures on sodic texture contrast soils in Northern New South Wales. Soil Research, 58 (2), 207-218. doi: 10.1071/sr19140 |
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2019 Journal Article Trends in maternal prepregnancy body mass index (BMI) and its association with birth and maternal outcomes in California, 2007–2016: a retrospective cohort studyRatnasiri, Anura W. G., Lee, Henry C., Lakshminrusimha, Satyan, Parry, Steven S., Arief, Vivi N., DeLacy, Ian H., Yang, Jo-Shing, DiLibero, Ralph J., Logan, Julia and Basford, Kaye E. (2019). Trends in maternal prepregnancy body mass index (BMI) and its association with birth and maternal outcomes in California, 2007–2016: a retrospective cohort study. PLoS ONE, 14 (9) e0222458, e0222458. doi: 10.1371/journal.pone.0222458 |
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2019 Journal Article Utilization of multiyear plant breeding data to better predict genotype performanceArief, Vivi N., Desmae, Haile, Hardner, Craig, DeLacy, Ian H., Gilmour, Arthur, Bull, Jason K. and Basford, Kaye E. (2019). Utilization of multiyear plant breeding data to better predict genotype performance. Crop Science, 59 (2), 480-490. doi: 10.2135/cropsci2018.03.0182 |
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2019 Journal Article QuLinePlus: extending plant breeding strategy and genetic model simulation to cross-pollinated populations—case studies in forage breedingHoyos-Villegas, Valerio, Arief, Vivi N, Yang, Wen-Hsi, Sun, Mingzhu, DeLacy, Ian H, Barrett, Brent A, Jahufer, Zulfi and Basford, Kaye E (2019). QuLinePlus: extending plant breeding strategy and genetic model simulation to cross-pollinated populations—case studies in forage breeding. Heredity, 122 (5), 684-695. doi: 10.1038/s41437-018-0156-0 |
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2018 Journal Article Temporal trends, patterns, and predictors of preterm birth in California from 2007 to 2016, based on the obstetric estimate of gestational ageRatnasiri, Anura W.G., Parry, Steven S., Arief, Vivi N., DeLacy, Ian H., Lakshminrusimha, Satyan, Halliday, Laura A., DiLibero, Ralph J. and Basford, Kaye E. (2018). Temporal trends, patterns, and predictors of preterm birth in California from 2007 to 2016, based on the obstetric estimate of gestational age. Maternal Health, Neonatology and Perinatology, 4 (1) 25, 25. doi: 10.1186/s40748-018-0094-0 |
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2018 Journal Article Recent trends, risk factors, and disparities in low birth weight in California, 2005-2014: a retrospective studyRatnasiri, Anura W. G., Parry, Steven S., Arief, Vivi N., DeLacy, Ian H., Halliday, Laura A., DiLibero, Ralph J. and Basford, Kaye E. (2018). Recent trends, risk factors, and disparities in low birth weight in California, 2005-2014: a retrospective study. Maternal Health, Neonatology and Perinatology, 4 (1) 15, 15. doi: 10.1186/s40748-018-0084-2 |
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2017 Journal Article Application of a dendrogram seriation algorithm to extract pattern from plant breeding dataArief, Vivi Noviati, DeLacy, I. H., Basford, K. E. and Dieters, M. J. (2017). Application of a dendrogram seriation algorithm to extract pattern from plant breeding data. Euphytica, 213 (4) 85. doi: 10.1007/s10681-017-1870-z |
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2017 Journal Article Delivering food safetyBasford, Kaye, Bennett, Richard, Daly, Joanne, Augustin, Mary Ann, Barlow, Snow, Gregson, Tony, Lee, Alice, Chen, Deli and Wenham, Matt (2017). Delivering food safety. Frontiers of Agricultural Science and Engineering, 4 (1), 1-4. doi: 10.15302/J-FASE-2016123 |
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2016 Journal Article Comparing classical criteria for selecting intra-class correlated features in MultimixHunt, Lynette A. and Basford, Kaye E. (2016). Comparing classical criteria for selecting intra-class correlated features in Multimix. Computational Statistics and Data Analysis, 103, 350-366. doi: 10.1016/j.csda.2016.05.018 |
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2016 Journal Article Analysis of sunflower data from a multi-attribute genotype ×environment trial in BrazilGarcia-Pena, Marisol, Arciniegas-Alarcon, Sergio, Basford, Kaye and Dias, Carlos Tadeu dos Santos (2016). Analysis of sunflower data from a multi-attribute genotype ×environment trial in Brazil. Communications in Biometry and Crop Science, 11 (2), 127-139. |
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2015 Journal Article Application of multiple imputation for missing values in three-way three-mode multi-environment trial dataTian, Ting, McLachlan, Geoffrey J., Dieter, Mark J. and Basford, Kaye E. (2015). Application of multiple imputation for missing values in three-way three-mode multi-environment trial data. PLoS One, 10 (12) e0144370, e0144370.1-e0144370.25. doi: 10.1371/journal.pone.0144370 |
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2015 Journal Article Using our worldwide networks to promote collaborationBasford, Kaye (2015). Using our worldwide networks to promote collaboration. ATSE Focus (190), 3-4. |
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2015 Journal Article Evaluating testing strategies for plant breeding field trials: redesigning a CIMMYT international wheat nurseryArief, Vivi N., DeLacy, Ian H., Crossa, Jose, Payne, Thomas, Singh, Ravi, Braun, Hans-J., Tian, Ting, Basford, Kaye E. and Dieters, Mark J. (2015). Evaluating testing strategies for plant breeding field trials: redesigning a CIMMYT international wheat nursery. Crop Science, 55 (1), 164-177. doi: 10.2135/cropsci2014.06.0415 |
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2015 Journal Article A genomic selection index applied to simulated and real dataCeron-Rojas, J. Jesus, Crossa, Jose, Arief, Vivi N., Basford, Kaye, Rutkoski, Jessica, Jarquin, Diego, Alvarado, Gregorio, Beyene, Yoseph, Semagn, Kassa and DeLacy, Ian (2015). A genomic selection index applied to simulated and real data. G3: Genes, Genomes, Genetics, 5 (10), 2155-2164. doi: 10.1534/g3.115.019869 |
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2014 Journal Article Statistics critical in securing our food supplyBasford, K. E. and Harch, B. D. (2014). Statistics critical in securing our food supply. ATSE Focus (182), 10-11. |
