
Overview
Background
Professor of Biometry
Research Interests:
Research at the interface between applied statistics and quantitative genetics with extensive publications on the analysis and interpretation of multi-way data from large-scale plant breeding experiments, particularly those involving genotype by environment interaction. Theory and application of pattern analysis - clustering and ordination procedures - appropriate for data collected from plant breeding experiments and/or stored in germplasm databases. Analysis, interpretation and impact of genotype x environment interaction for primary economic plant attributes (yield and quality) and data management, integration and analysis (bioinformatics).
Other Activities:
Past President of the International Biometric Society (2010-11) and the Statistical Society of Australia Incorporated (2005-07). Life member of the Statistical Society of Australia Incorporated (2010). Australian Medal for Agricultural Science from the Australian Institute of Agricultural Science and Technology (1998).
Previous Head of the School of Land, Crop and Food Sciences (2001-10).
Fellow of the Australian Academy of Technological Sciences and Engineering, Australian Institute of Company Directors, Australian Institute of Agricultural Science and Technology and Institute of Statisticians (which has merged with the Royal Statistical Society).
Member of the Board of Trustees of the International Rice Research Institute (2013-15).
Availability
- Emeritus Professor Kaye Basford is:
- Available for supervision
- Media expert
Fields of research
Qualifications
- Bachelor (Honours) of Science (Advanced), The University of Queensland
- Masters (Coursework), The University of Queensland
- Doctor of Philosophy, The University of Queensland
- Australian Academy of Technological Sciences and Engineering, Australian Academy of Technological Sciences and Engineering
- Australian Institute Of Agricultural Science and Technology, Australian Institute Of Agricultural Science and Technology
- Australian Institute of Company Directors, Australian Institute of Company Directors
- Queensland Academy of Arts and Sciences, Queensland Academy of Arts and Sciences
Works
Search Professor Kaye Basford’s works on UQ eSpace
1999
Conference Publication
Application of different experimental designs and analytical methods in the analysis of variety trials
Qiao, C., Basford, K. E., DeLacy, I. H. and Cooper, M. (1999). Application of different experimental designs and analytical methods in the analysis of variety trials. 11th Australian Plant Breeding Conference, Stamford Grand Hotel, Glenelg, SA, 19-23 April 1999. Adelaide: Univ. of Adelaide (Waite Campus), SA.
1999
Journal Article
Computer simulation of a selection strategy to accommodate genotype-environment interactions in a wheat recurrent selection programme
Podlich, D. W., Cooper, M. and Basford, K. E. (1999). Computer simulation of a selection strategy to accommodate genotype-environment interactions in a wheat recurrent selection programme. Plant Breeding, 118 (1), 17-28. doi: 10.1046/j.1439-0523.1999.118001017.x
1999
Journal Article
The analysis of designed experiments and longitudinal data by using smoothing splines - Discussion
Kempton, R, Mead, R, Engel, B, ter Braak, CJF, Nelder, JA, Morton, R, Green, P, Molenberghs, G, Basford, K, Longford, NT, Gilmour, SG, Butler, N, Eilers, PHC and Pettitt, T (1999). The analysis of designed experiments and longitudinal data by using smoothing splines - Discussion. Journal of the Royal Statistical Society Series C-Applied Statistics, 48, 300-311.
1999
Conference Publication
Extending the two-way mixture model program EMMIX to analyse incomplete data
Greenway, D. R., Peel, D., Basford, K. E. and McLachlan, G. J. (1999). Extending the two-way mixture model program EMMIX to analyse incomplete data. Biometrics 99, Univ. of Tas., Hobart, Tas, Aust., 12-16 December 1999. Hobart, Aust.: Int. Biomtric Society, Australasian Region.
1999
Conference Publication
Effect of check genotypes on the combined analysis of wheat breeding multi-environment trials
Qiao, C., DeLacy, I. H., Cooper, M. and Basford, K. E. (1999). Effect of check genotypes on the combined analysis of wheat breeding multi-environment trials. Vision 2020, The Univ. of Southern Qld, Toowoomba, 27 September - 1 October 1999. Toowoomba, Qld: Organising Committee Aust. Wheat Breeding Society.
1999
Conference Publication
Phaseolus vulgaris, core germplasm analyses and evolutionary history
Redden, R., Islam, A. F., Beebe, S. and Basford, K. E. (1999). Phaseolus vulgaris, core germplasm analyses and evolutionary history. 11th Australian Plant Breeding Conference, Stambord Grand Hotel, Glenelg, Adelaide, 19-23 April 1999. Adelaide: Grains Research & Development Corporation.
1998
Conference Publication
Agronomic adaptation to environmental challenges in the genus Leucaena
Mullen, BF, Shelton, HM, Basford, KE, Castillo, AC, Bino, B, Victorio, EE, Acasio, RN, Tarabu, J, Komolong, MK, Galgal, KK, Khoa, LV, Co, HX, Wandera, FP, Ibrahim, TM, Clem, RL, Jones, RJ, Middleton, CH, Bolam, MJM, Gabunada, F, Stur, WW, Horne, PM, Utachak, K and Khanh, TT (1998). Agronomic adaptation to environmental challenges in the genus Leucaena. Workshop on Leucaena - Adaptation, Quality and Farming Systems, Hanoi Vietnam, Feb 09-14, 1998. CANBERRA: AUSTRALIAN CENTRE INT AGRICULTURAL RESEARCH.
1998
Journal Article
Whatever your work, make sure it is fun
Basford, Kaye E. (1998). Whatever your work, make sure it is fun. Agricultural Science, 11, 5.
1998
Journal Article
Genotypexenvironment interactions and some considerations of their implications for wheat breeding in Australia
Basford, K. E. and Cooper, M. (1998). Genotypexenvironment interactions and some considerations of their implications for wheat breeding in Australia. Australian Journal of Agricultural Research, 49 (2), 153-174. doi: 10.1071/A97035
1997
Journal Article
Modelling the distribution of stamp paper thickness via finite normal mixtures: The 1872 Hidalgo stamp issue of Mexico revisited
Basford, K. E., Mclachlan, G. J. and York, M. G. (1997). Modelling the distribution of stamp paper thickness via finite normal mixtures: The 1872 Hidalgo stamp issue of Mexico revisited. Journal of Applied Statistics, 24 (2), 169-179.
1997
Journal Article
Genotype by environment effects and selection for drought tolerance in tropical maize. II. Three-mode pattern analysis
Chapman, Scott C., Crossa, José, Basford, Kaye E. and Kroonenberg, Pieter M. (1997). Genotype by environment effects and selection for drought tolerance in tropical maize. II. Three-mode pattern analysis. Euphytica, 95 (1), 11-20. doi: 10.1023/A:1002922527795
1997
Journal Article
The analysis of large scale data taken from the world groundnut (Arachis hypogaea L.) germplasm collection I. Two-way quantitative data
Harch, B. D., Basford, K. E., DeLacy, I. H. and Lawrence, P. K. (1997). The analysis of large scale data taken from the world groundnut (Arachis hypogaea L.) germplasm collection I. Two-way quantitative data. Euphytica, 95 (1), 27-38. doi: 10.1023/A:1002971207770
1997
Journal Article
Modelling the distribution of stamp paper thickness via finite normal mixtures: The 1872 Hidalgo stamp issue of Mexico revisited
Basford, K. E., McLachlan, G. J. and York, M. G. (1997). Modelling the distribution of stamp paper thickness via finite normal mixtures: The 1872 Hidalgo stamp issue of Mexico revisited. Journal of Applied Statistics, 24 (2), 169-180. doi: 10.1080/02664769723783
1997
Journal Article
Graphical profiles as an aid to understanding plant breeding experiments
Basford, Kay E. and Tukey, John W. (1997). Graphical profiles as an aid to understanding plant breeding experiments. Journal of Statistical Planning and Inference, 57 (1), 93-107. doi: 10.1016/S0378-3758(96)00038-9
1997
Journal Article
Combined Analysis of Categorical and Numerical Descriptors of Australian Groundnut Accessions Using Nonlinear Principal Component Analysis
Kroonenberg, P. M., Harch, B. D., Basford, K. E. and Cruickshank, A. (1997). Combined Analysis of Categorical and Numerical Descriptors of Australian Groundnut Accessions Using Nonlinear Principal Component Analysis. Journal of Agricultural, Biological, and Environmental Statistics, 2 (3), 294-312. doi: 10.2307/1400447
1997
Journal Article
Standard errors of fitted component means of normal mixtures
Basford, K. E., Greenway, D. R., McLachlan, G. J. and Peel, D. (1997). Standard errors of fitted component means of normal mixtures. Computational Statistics, 12 (1), 1-17.
1997
Journal Article
Genetic analysis of variation for grain yield and protein concentration in two wheat crosses
Fabrizius, MA, Cooper, M and Basford, KE (1997). Genetic analysis of variation for grain yield and protein concentration in two wheat crosses. Australian Journal of Agricultural Research, 48 (5), 605-614. doi: 10.1071/A96152
1996
Journal Article
A laboratory study of dimensional changes for three elastomeric impression materials using custom and stock trays
Boulton, JL, Gage, JP, Vincent, PF and Basford, KE (1996). A laboratory study of dimensional changes for three elastomeric impression materials using custom and stock trays. Australian Dental Journal, 41 (6), 398-404. doi: 10.1111/j.1834-7819.1996.tb06026.x
1996
Journal Article
Mixed data types and the use of pattern analysis on the Australian groundnut germplasm data
Harch, BD, Basford, KE, DeLacy, IH, Lawrence, PK and Cruickshank, A (1996). Mixed data types and the use of pattern analysis on the Australian groundnut germplasm data. Genetic Resources and Crop Evolution, 43 (4), 363-376. doi: 10.1007/BF00132957
1996
Book Chapter
Relationships among analytical methods used to analyse genotypic adaptation in multi-environment trials
Cooper, M., DeLacy, I. H. and Basford, K. E. (1996). Relationships among analytical methods used to analyse genotypic adaptation in multi-environment trials. Plant adaptation and crop improvement. (pp. 193-224) edited by M. Cooper and G. L. Hammer. Wallingford, United Kingdom: CAB International.
Funding
Current funding
Past funding
Supervision
Availability
- Emeritus Professor Kaye Basford is:
- Available for supervision
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Supervision history
Current supervision
-
Doctor Philosophy
Using statistical genetics approaches to gain insight into patterns of variation in complex traits
Principal Advisor
Other advisors: Professor Geoffrey McLachlan, Dr Vivi Arief, Dr Quan Nguyen
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Doctor Philosophy
Using statistical genetics approaches to gain insight into patterns of variation in complex traits
Principal Advisor
Other advisors: Professor Geoffrey McLachlan, Dr Vivi Arief, Dr Quan Nguyen
-
Doctor Philosophy
Examination of combined selection for grain yield and grain protein from wheat recurrent selection programs
Principal Advisor
-
Doctor Philosophy
Genetic control of physiological traits in bread wheat in response to increased temperature in MAGIC population.
Associate Advisor
Other advisors: Dr Vijaya Singh, Dr Vivi Arief
Completed supervision
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2023
Doctor Philosophy
Analysis of field data for an advanced wheat breeding population using prediction models
Principal Advisor
Other advisors: Dr Vivi Arief
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2021
Doctor Philosophy
Trends and predictors of adverse birth outcomes and infant mortality in California for the period 2005-2016
Principal Advisor
Other advisors: Dr Vivi Arief
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2019
Doctor Philosophy
Rapid Soil Development in Response to Land Use Change Case studies from the northern New South Wales Slopes, Plains and New England Tablelands
Principal Advisor
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2016
Doctor Philosophy
Estimation of missing values in multivariate multi-environment trial data for three-way pattern analysis
Principal Advisor
Other advisors: Professor Geoffrey McLachlan
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2007
Doctor Philosophy
IMPROVING SELECTION IN SUGARCANE BREEDING PROGRAMS WITH AN APPLICATION IN BURDEKIN REGION, AUSTRALIA
Principal Advisor
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2006
Doctor Philosophy
JOINT MODELLING OF SPATIAL VARIABILITY AND INTERPLOT COMPETITION TO IMPROVE THE EFFICIENCY OF PLANT IMPROVEMENT
Principal Advisor
-
2005
Doctor Philosophy
AN ASSESMENT OF STATISTICAL METHODOLOGIES USED IN THE ANALYSIS OF MARINE COMMUNITY DATA
Principal Advisor
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2005
Doctor Philosophy
SIMULATING THE IMPACT OF MARKER-ASSISTED SELECTION IN A WHEAT BREEDING PROGRAM
Principal Advisor
Other advisors: Professor Mark Cooper
-
2004
Doctor Philosophy
GENOTYPIC VARIATION IN SOYBEAN FOR STRATEGIES OF DROUGHT STRESS RESPONSE
Principal Advisor
Other advisors: Professor Mark Cooper
-
2003
Doctor Philosophy
OPTIMISATION OF EXPERIMENTAL DESIGN AND ANALYSIS FOR VARIETY TRIALS TO MAXIMISE GENETIC GAIN
Principal Advisor
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2016
Doctor Philosophy
Genomic diversity of Brassica juncea
Associate Advisor
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2012
Doctor Philosophy
The development and application of methods and tools for the assembly and analysis of second generation sequence data
Associate Advisor
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2012
Master Philosophy
Statistical Models in a Heifer Management study: Testing Effects on Plasma Progesterone in Bos indicus cross cattle
Associate Advisor
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2011
Doctor Philosophy
Development and application of bioinformatics tools for computational marker discovery and the integration and visualisation of plant genetic and genomic data
Associate Advisor
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2008
Doctor Philosophy
The availability of nitrogen in GCTB soils in the wet tropics and its impact on productivity/profitability: A systems analysis
Associate Advisor
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2004
Doctor Philosophy
Investigating quantitative genetic issues for a pedigree plant breeding program using computer simulation
Associate Advisor
Other advisors: Professor Mark Cooper
-
2003
Doctor Philosophy
ECONOMIC IMPLICATIONS OF FACTORS AFFECTING CANE YIELD AND CCS AT TULLY
Associate Advisor
Media
Enquiries
Contact Emeritus Professor Kaye Basford directly for media enquiries about:
- Agricultural science and statistics
- Bioinformatics
- Biology and statistics
- Biometrics
- Breeding - plants
- Plant breeding
- Statistics in agricultural science
- Statistics in biology
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