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2021 Journal Article First record of Bengal Tiger, Panthera tigris tigris Linnaeus, 1758 (Felidae), in eastern NepalBista, Damber, Lama, Sonam Tashi, Shrestha, Janam, Rumba, Yam Bahadur, Weerman, Janno, Thapa, Madhuri, Acharya, Haribhadra, Sherpa, Ang Phuri, Hudson, Nicholas J., Baxter, Greg S. and Murray, Peter John (2021). First record of Bengal Tiger, Panthera tigris tigris Linnaeus, 1758 (Felidae), in eastern Nepal. Check List, 17 (5), 1249-1253. doi: 10.15560/17.5.1249 |
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2021 Journal Article A conserved haplotype in Wagyu cattle contains RAB4A whose encoded protein regulates glucose trafficking in muscle and fat cellsHudson, N. J., Porto-Neto, L., Naval-Sanchez, M., Lyons, R. E. and Reverter, Antonio (2021). A conserved haplotype in Wagyu cattle contains RAB4A whose encoded protein regulates glucose trafficking in muscle and fat cells. Animal Genetics, 52 (3), 275-283. doi: 10.1111/age.13054 |
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2021 Journal Article Improved trapping and handling of an arboreal, montane mammal: Red panda Ailurus fulgensBista, Damber, Lama, Sonam Tashi, Weerman, Janno, Sherpa, Ang Phuri, Pandey, Purushotam, Thapa, Madhuri Karki, Acharya, Haribhadra, Hudson, Nicholas J., Baxter, Greg S. and Murray, Peter John (2021). Improved trapping and handling of an arboreal, montane mammal: Red panda Ailurus fulgens. Animals, 11 (4) 921, 1-13. doi: 10.3390/ani11040921 |
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2021 Journal Article Upstream Regulator Analysis of Wooden Breast Myopathy Proteomics in Commercial Broilers and Comparison to Feed Efficiency Proteomics in Pedigree Male BroilersBottje, Walter G., Lassiter, Kentu R., Kuttappan, Vivek A., Hudson, Nicholas J., Owens, Casey M., Abasht, Behnam, Dridi, Sami and Kong, Byungwhi C. (2021). Upstream Regulator Analysis of Wooden Breast Myopathy Proteomics in Commercial Broilers and Comparison to Feed Efficiency Proteomics in Pedigree Male Broilers. Foods (Basel, Switzerland), 10 (1) 104, 104. doi: 10.3390/foods10010104 |
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2021 Journal Article Space use, interaction and recursion in a solitary specialized herbivore: a red panda case studyBista, Damber, Baxter, Greg S., Hudson, Nicholas J., Lama, Sonam Tashi, Weerman, Janno and Murray, Peter J. (2021). Space use, interaction and recursion in a solitary specialized herbivore: a red panda case study. Endangered Species Research, 47, 131-143. doi: 10.3354/esr01171 |
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2020 Journal Article A low-density SNP genotyping panel for the accurate prediction of cattle breedsReverter, Antonio, Hudson, Nicholas J., McWilliam, Sean, Alexandre, Pamela A., Li, Yutao, Barlow, Robert, Welti, Nina, Daetwyler, Hans, Porto-Neto, Laercio R. and Dominik, Sonja (2020). A low-density SNP genotyping panel for the accurate prediction of cattle breeds. Journal of Animal Science, 98 (11) skaa337, 1-10. doi: 10.1093/jas/skaa337 |
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2020 Journal Article Genome-wide co-expression distributions as a metric to prioritize genes of functional importanceAlexandre, Pâmela A., Hudson, Nicholas J., Lehnert, Sigrid A., Fortes, Marina R. S., Naval-Sánchez, Marina, Nguyen, Loan T., Porto-Neto, Laercio R. and Reverter, Antonio (2020). Genome-wide co-expression distributions as a metric to prioritize genes of functional importance. Genes, 11 (10) 1231, 1231-13. doi: 10.3390/genes11101231 |
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2020 Journal Article Dynamics of gene co-expression networks in time-series data: a case study in Drosophila melanogaster embryogenesisLau, Li Yieng, Reverter, Antonio, Hudson, Nicholas J., Naval-Sanchez, Marina, Fortes, Marina R. S. and Alexandre, Pâmela A. (2020). Dynamics of gene co-expression networks in time-series data: a case study in Drosophila melanogaster embryogenesis. Frontiers in Genetics, 11 517, 517. doi: 10.3389/fgene.2020.00517 |
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2020 Journal Article The efficacy of sunitinib treatment of renal cancer cells is associated with the protein PHAX in vitroAl-Lamki, Rafia S., Hudson, Nicholas J., Bradley, John R., Warren, Anne Y., Eisen, Tim, Welsh, Sarah J., Riddick, Antony C. P., O’Mahony, Fiach C., Turnbull, Arran, Powles, Thomas, SCOTRRCC Collaborative, Reverter, Antonio, Harrison, David J. and Stewart, Grant D. (2020). The efficacy of sunitinib treatment of renal cancer cells is associated with the protein PHAX in vitro. Biology, 9 (4) 74, 1-21. doi: 10.3390/biology9040074 |
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2020 Journal Article Association analysis of loci implied in 'buffering' epistasisReverter, Antonio, Vitezica, Zulma G., Naval-Sánchez, Marina, Henshall, John, Raidan, Fernanda, Li, Yutao, Meyer, Karin, Hudson, Nicholas J., Porto-Neto, Laercio R. and Legarra, Andrés (2020). Association analysis of loci implied in 'buffering' epistasis. Journal of Animal Science, 98 (3) skaa045. doi: 10.1093/jas/skaa045 |
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2020 Journal Article Gene expression identifies metabolic and functional differences between intramuscular and subcutaneous adipocytes in cattleHudson, Nicholas J., Reverter, Antonio, Griffiths, William J., Yutuc, Eylan, Wang, Yuqin, Jeanes, Angela, McWilliam, Sean, Pethick, David W. and Greenwood, Paul L. (2020). Gene expression identifies metabolic and functional differences between intramuscular and subcutaneous adipocytes in cattle. BMC Genomics, 21 (1) 77, 77. doi: 10.1186/s12864-020-6505-4 |
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2019 Journal Article Visual opsin diversity in sharks and raysHart, Nathan S., Lamb, Trevor D., Patel, Hardip R., Chuah, Aaron, Natoli, Riccardo C., Hudson, Nicholas J., Cutmore, Scott C., Davies, Wayne I. L., Collin, Shaun P. and Hunt, David M. (2019). Visual opsin diversity in sharks and rays. Molecular Biology and Evolution, 37 (3), 811-827. doi: 10.1093/molbev/msz269 |
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2018 Journal Article MicroRNA profiling associated with muscle growth in modern broilers compared to an unselected chicken breedKhatri, Bhuwan, Seo, Dongwon, Shouse, Stephanie, Pan, Jeong Hoon, Hudson, Nicholas J., Kim, Jae Kyeom, Bottje, Walter and Kong, Byungwhi C. (2018). MicroRNA profiling associated with muscle growth in modern broilers compared to an unselected chicken breed. BMC Genomics, 19 (1) 683, 683. doi: 10.1186/s12864-018-5061-7 |
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2018 Journal Article A haplotype information theory method reveals genes of evolutionary interest in European vs. Asian pigsHudson, Nicholas J., Naval-Sánchez, Marina, Porto-Neto, Laercio, Pérez-Enciso, Miguel and Reverter, Antonio (2018). A haplotype information theory method reveals genes of evolutionary interest in European vs. Asian pigs. Journal of Animal Science, 96 (8), 3064-3069. doi: 10.1093/jas/sky225 |
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2017 Journal Article Molecular regulation of muscle mass in developing Blonde d’Aquitaine foetuses compared to CharolaisCassar-Malek, Isabelle , Boby, Céline , Picard, Brigitte, Reverter, Antonio and Hudson, Nicholas J. (2017). Molecular regulation of muscle mass in developing Blonde d’Aquitaine foetuses compared to Charolais. Biology Open, 6 (10), 1483-1492. doi: 10.1242/bio.024950 |
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2017 Journal Article A pathway-centered analysis of pig domestication and breeding in eurasiaLeno-Colorado, Jordi, Hudson, Nick J., Reverter, Antonio and Pérez-Enciso, Miguel (2017). A pathway-centered analysis of pig domestication and breeding in eurasia. G3: Genes, Genomes, Genetics, 7 (7), 2171-2184. doi: 10.1534/g3.117.042671 |
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2017 Journal Article Data compression can discriminate broilers by selection line, detect haplotypes, and estimate genetic potential for complex phenotypesHudson, N. J., Hawken, R. J., Okimoto, R., Sapp, R. L. and Reverter, A. (2017). Data compression can discriminate broilers by selection line, detect haplotypes, and estimate genetic potential for complex phenotypes. Poultry Science, 96 (9), 3031-3038. doi: 10.3382/ps/pex151 |
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2017 Journal Article Proteogenomics reveals enriched ribosome assembly and protein translation in Pectoralis major of high feed efficiency pedigree broiler malesBottje, Walter G., Lassiter, Kentu, Piekarski-Welsher, Alissa, Dridi, Sami, Reverter, Antonio, Hudson, Nicholas J. and Kong, Byung-Whi (2017). Proteogenomics reveals enriched ribosome assembly and protein translation in Pectoralis major of high feed efficiency pedigree broiler males. Frontiers in Physiology, 8 (MAY) 306. doi: 10.3389/fphys.2017.00306 |
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2017 Journal Article Progesterone signalling in broiler skeletal muscle is associated with divergent feed efficiencyBottje, Walter, Kong, Byung-Whi, Reverter, Antonio, Waardenberg, Ashley J., Lassiter, Kentu and Hudson, Nicholas J. (2017). Progesterone signalling in broiler skeletal muscle is associated with divergent feed efficiency. BMC Systems Biology, 11 (1) 29. doi: 10.1186/s12918-017-0396-2 |
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2017 Journal Article The 'heritability' of domestication and its functional partitioning in the pigPerez-Enciso, M., De Los Campos, G., Hudson, N., Kijas, J. and Reverter, A. (2017). The 'heritability' of domestication and its functional partitioning in the pig. Heredity, 118 (2), 160-168. doi: 10.1038/hdy.2016.78 |
