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2021 Other Outputs Clinical Burkholderia pseudomallei isolates from Queensland carry diverse bimABm genes that are associated with central nervous system disease and are phylogenomically distinct from other Australian strainsBurnard, Delaney, Bauer, Michelle J, Falconer, Caitlin, Gassiep, Ian, Norton, Robert E, Paterson, David L and Harris, Patrick N A (2021). Clinical Burkholderia pseudomallei isolates from Queensland carry diverse bimABm genes that are associated with central nervous system disease and are phylogenomically distinct from other Australian strains. doi: 10.1101/2021.05.16.21257282 |
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2021 Other Outputs MicroPIPE: An end-to-end solution for high-quality complete bacterial genome constructionMurigneux, Valentine, Roberts, Leah W., Forde, Brian M., Phan, Minh-Duy, Nhu, Nguyen Thi Khanh, Irwin, Adam D., Harris, Patrick N. A., Paterson, David L., Schembri, Mark A., Whiley, David M. and Beatson, Scott A. (2021). MicroPIPE: An end-to-end solution for high-quality complete bacterial genome construction. doi: 10.1101/2021.02.02.429319 |
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2020 Other Outputs Genomic surveillance, characterisation and intervention of a carbapenem-resistant Acinetobacter baumannii outbreak in critical careRoberts, Leah W., Forde, Brian M., Hurst, Trish, Ling, Weiping, Nimmo, Graeme R., Bergh, Haakon, George, Narelle, Hajkowicz, Krispin, McNamara, John F, Lipman, Jeffrey, Permana, Budi, Schembri, Mark A., Paterson, David, Beatson, Scott A. and Harris, Patrick N. A. (2020). Genomic surveillance, characterisation and intervention of a carbapenem-resistant Acinetobacter baumannii outbreak in critical care. doi: 10.1101/2020.08.10.20166652 |
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2020 Other Outputs Comparative genomics and antimicrobial resistance profiling of Elizabethkingia isolates reveals nosocomial transmission and in vitro susceptibility to fluoroquinolones, tetracyclines and trimethoprim-sulfamethoxazoleBurnard, Delaney, Gore, Letitia, Henderson, Andrew, Ranasinghe, Ama, Bergh, Haakon, Cottrell, Kyra, Sarovich, Derek S., Price, Erin P., Paterson, David L. and Harris, Patrick N. A. (2020). Comparative genomics and antimicrobial resistance profiling of Elizabethkingia isolates reveals nosocomial transmission and in vitro susceptibility to fluoroquinolones, tetracyclines and trimethoprim-sulfamethoxazole. doi: 10.1101/2020.03.12.20032722 |
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2019 Other Outputs Quantitative real-time PCR assay for the rapid identification of the multidrug-resistant bacterial pathogen Stenotrophomonas maltophiliaFraser, Tamieka A., Bell, Mikaela G., Harris, Patrick N.A., Bell, Scott C., Bergh, Haakon, Nguyen, Thuy-Khanh, Kidd, Timothy J., Nimmo, Graeme R., Sarovich, Derek S. and Price, Erin P. (2019). Quantitative real-time PCR assay for the rapid identification of the multidrug-resistant bacterial pathogen Stenotrophomonas maltophilia. doi: 10.1101/702985 |
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2019 Other Outputs Genomic investigation reveals contaminated detergent as the source of an ESBL-producing Klebsiella michiganensis outbreak in a neonatal unitChapman, Paul, Forde, Brian M., Roberts, Leah W., Bergh, Haakon, Vesey, Debra, Jennison, Amy V., Moss, Susan, Paterson, David L., Beatson, Scott A. and Harris, Patrick N. A. (2019). Genomic investigation reveals contaminated detergent as the source of an ESBL-producing Klebsiella michiganensis outbreak in a neonatal unit. doi: 10.1101/568154 |
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2018 Other Outputs Defining an evidence-based approach for the optimal management of gram-negative infections in the era of emerging antimicrobial resistanceHarris, Patrick Noel Angier (2018). Defining an evidence-based approach for the optimal management of gram-negative infections in the era of emerging antimicrobial resistance. PhD Thesis, Faculty of Medicine, The University of Queensland. doi: 10.14264/dca09ed |
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2017 Other Outputs Risk factors for relapse or persistence of bacteraemia caused by Enterobacter spp.: a case-control studyHarris, Patrick N.A. (2017). Risk factors for relapse or persistence of bacteraemia caused by Enterobacter spp.: a case-control study. Harvard Dataverse. (Dataset) |
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2017 Other Outputs Clinical meta-data from patients with bloodstream infections caused by 3GC-resistant E. coliHarris, Patrick N.A. (2017). Clinical meta-data from patients with bloodstream infections caused by 3GC-resistant E. coli. Harvard Dataverse. (Dataset) |
