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2025 Journal Article Single-cell Rapid Capture Hybridization sequencing to reliably detect isoform usage and coding mutations in targeted genesPeng, Hongke, Jabbari, Jafar S., Tian, Luyi, Wang, Changqing, You, Yupei, Chua, Chong Chyn, Anstee, Natasha S., Amin, Noorul, Wei, Andrew H., Davidson, Nadia, Roberts, Andrew W., Huang, David, Ritchie, Matthew E and Thijssen, Rachel (2025). Single-cell Rapid Capture Hybridization sequencing to reliably detect isoform usage and coding mutations in targeted genes. Genome Research, 35 (4), gr.279322.124-955. doi: 10.1101/gr.279322.124 |
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2024 Journal Article Flexiplex: a versatile demultiplexer and search tool for omics dataCheng, Oliver, Ling, Min Hao, Wang, Changqing, Wu, Shuyi, Ritchie, Matthew E., Goke, Jonathan, Amin, Noorul and Davidson, Nadia M. (2024). Flexiplex: a versatile demultiplexer and search tool for omics data. Bioinformatics, 40 (3) btae102, 3. doi: 10.1093/bioinformatics/btae102 |
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2024 Journal Article Single-cell Rapid Capture Hybridization sequencing (scRaCH-seq) to reliably detect isoform usage and coding mutations in targeted genes at a single-cell levelPeng, Hongke, Jabbari, Jafar S., Tian, Luyi, Chua, Chong Chyn, Natasha S. Anstee, Amin, Noorul, Wei, Andrew H., Davidson, Nadia M., Roberts, Andrew W., Huang, David C. S., Ritchie, Matthew E. and Thijssen, Rachel (2024). Single-cell Rapid Capture Hybridization sequencing (scRaCH-seq) to reliably detect isoform usage and coding mutations in targeted genes at a single-cell level. bioRxiv, 1-25. doi: 10.1101/2024.01.30.577942 |
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2021 Journal Article FexRNA: exploratory data analysis and feature selection of non-coding RNAAmin, Noorul, McGrath, Annette and Chen, Yi-Ping Phoebe (2021). FexRNA: exploratory data analysis and feature selection of non-coding RNA. IEEE/ACM Transactions on Computational Biology and Bioinformatics, 18 (6), 2795-2801. doi: 10.1109/tcbb.2021.3057128 |
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2020 Journal Article Reply to: LncADeep performance on full-length transcriptsAmin, Noorul, McGrath, Annette and Chen, Yi-Ping Phoebe (2020). Reply to: LncADeep performance on full-length transcripts. Nature Machine Intelligence, 3 (3), 196-196. doi: 10.1038/s42256-019-0107-3 |
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2020 Journal Article Author Correction: Evaluation of deep learning in non-coding RNA classificationAmin, Noorul, McGrath, Annette and Chen, Yi-Ping Phoebe (2020). Author Correction: Evaluation of deep learning in non-coding RNA classification. Nature Machine Intelligence, 2 (4), 236-236. doi: 10.1038/s42256-019-0143-z |
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2019 Journal Article Evaluation of deep learning in non-coding RNA classificationAmin, Noorul, McGrath, Annette and Chen, Yi-Ping Phoebe (2019). Evaluation of deep learning in non-coding RNA classification. Nature Machine Intelligence, 1 (5), 246-256. doi: 10.1038/s42256-019-0051-2 |
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2015 Journal Article Distance-constraint k-nearest neighbor searching in mobile sensor networksHan, Yongkoo, Park, Kisung, Hong, Jihye, Ulamin, Noor and Lee, Young-Koo (2015). Distance-constraint k-nearest neighbor searching in mobile sensor networks. Sensors, 15 (8), 18209-18228. doi: 10.3390/s150818209 |
