
Overview
Background
The molecular evolution of cytochrome P450 Enzymes: biological catalysts of unprecedented versatility.
Cytochrome P450 enzymes (CYPs, P450s) especially those responsible for drug metabolism in humans, are the unifying theme of the research in our lab. These fascinating enzymes are catalysts of exceptional versatility, and functional diversity. In humans they are principally responsible for the clearance of a practically unlimited variety of chemicals from the body, but are also critical in many important physiological processes. In other organisms (plants, animals, bacteria, fungi, almost everything!) they carry out an unprecedented range of functions, such as defense, chemical communication, neural development and even pigmentation. P450s are involved in the biosynthesis of an unequalled range of potent, biologically active natural products in microbes, plants and animals, including many antibiotics, plant and animal hormones, signalling molecules, toxins, flavours and fragrances. We are studying how P450s have evolved to deal with novel substrates by reconstructing ancestral precursors and evolutionary pathways, to answer such questions as how did the koala evolve to live on eucalyptus leaves, a toxic diet for most mammals.
The capabilities of P450s are only just coming to be fully recognized and structural studies on P450s should yield critical insights into how enzyme structure determines function. For example, recently we discovered that P450s are present within cells in the Fe(II) form, a finding that has led to a radical revision of the dogma concerning the P450 catalytic cycle, and has implications for the control of uncoupling of P450 activity in cells. Importantly, the biotechnological potential of P450s remains yet to be exploited. All of the specific research themes detailed below take advantage of our recognized expertise in the expression of recombinant human cytochrome P450 enzymes in bacteria. Our group is interested in finding out how P450s work and how they can be made to work better.
Artificial evolution of P450s for drug development and bioremediation: a way of exploring the sequence space and catalytic potential of P450s. The demonstrated catalytic diversity of P450 enzymes makes them the ideal starting material for engineering sophisticated chemical reagents to catalyse difficult chemical transformations. We are using artificial (or directed) evolution to engineer enzymes that are more efficient, robust and specialized than naturally occurring enzymes with the aim of selecting for properties that are commercially useful in the areas of drug discovery and development and bioremediation of pollutants in the environment. The approach we are using also allows us to explore the essential sequence and structural features that underpin all ~12000 known P450s so as to determine how they work.
Synthetic biology of enzymes for clean, green, solar-powered chemistry in drug development, bioremediation and biosensors. We have identified ancestral enzymes that are extremely thermostable compared to their modern counterparts, making them potentially very useful in industry, since they can withstand long incubations at elevated temperatures. They can be used as ‘off the shelf’ reagents to catalyse useful chemistry, such as in in drug discovery and development, fine chemicals synthesis, and cleaning up the environment. Working with drug companies, we are exploring how they can be best deployed in chemical processes and what structural features make them efficient, robust and specialized. We are also immobilizing P450s in virus-like-particles as ‘designer’ reagents that can be recovered from reactions and reused. To make such processes cheaper and more sustainable, we are using photosynthesis to power P450 reactions for clean, green biocatalysis in microalgae.
Biosketch:
After graduating from UQ with first class Honours in Biochemistry, Elizabeth took up a Royal Commission for the Exhibition of 1851 Overseas Scholarship to pursue doctoral work at Oxford University then undertook postdoctoral work at the Center in Molecular Toxicology and Department of Biochemistry at Vanderbilt University School of Medicine with Prof. F.P. Guengerich. She returned to UQ in 1993 to take up a position in Pharmacology and joined the School of Chemistry and Molecular Biosciences in 2009 as a Professor of Biochemistry.
Availability
- Professor Elizabeth Gillam is:
- Available for supervision
- Media expert
Fields of research
Qualifications
- Bachelor (Honours) of Science (Advanced), The University of Queensland
- Doctor of Philosophy, University of Oxford
Research interests
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Protein engineering
Enzymes such as cytochromes P450 are powerful, specific catalysts that could be very useful in making chemical industries more sustainable and environmentally benign. However naturally occurring enzymes usually cannot survive the long process times and elevated temperatures used in industry. We are engineering enzymes to be thermostable, to tolerate organic solvents and to use alternative cofactors so that they can be employed as designer biocatalysts for the pharmaceutical and other chemical industries.
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Synthetic Biology
We are developing novel systems for biocatalysis to replace energy-intensive steps in chemical processes, such as in the synthesis of drugs, with more sustainable alternatives using enzymes. We are engineering cytochrome P450 enzymes as biocatalysts, attaching them to protein cages and linking them to photosynthesis as a green energy source.
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Molecular evolution
Plants and the animals that consume them are locked in an evolutionary battle involving chemical warfare: plants produce toxins to discourage animals from eating them and in turn, animals develop enzymes to metabolise the plant toxins. We are studying the way enzymes in animals have evolved to respond to the changing chemical environment presented by plant secondary metabolism, processes that have a direct bearing on the ability of people to metabolise drugs and other environmental chemicals.
Research impacts
Our research is leading to the development of more sustainable, environmentally friendly, chemical processes to accelerate drug development and improve the safety of medicines. Our studies into the evolution of catalytic promiscuity in P450s reveal how organisms have evolved to deal with chemicals in the environment and provide insights as to how enzymes develop novel functions. More broadly, the methods that we have developed with colleagues at UQ and in industry for the ancestral reconstruction of P450s and their implementation as sophisticated biocatalysts in industry can be applied to the optimisation of other proteins and enzymes for biotechnological application.
Works
Search Professor Elizabeth Gillam’s works on UQ eSpace
2000
Journal Article
Roles of NADPH-P450 reductase in the O-Deethylation of 7-Ethoxycoumarin by recombinant human cytochrome P450 1B1 variants in Escherichia coli
Shimada, Tsutomu, Tsumura, Fujiko, Gillam, Elizabeth M. J., Guengerich, F. Peter and Inoue, Kiyoshi (2000). Roles of NADPH-P450 reductase in the O-Deethylation of 7-Ethoxycoumarin by recombinant human cytochrome P450 1B1 variants in Escherichia coli. Protein Expression and Purification, 20 (1), 73-80. doi: 10.1006/prep.2000.1302
2000
Journal Article
Phenytoin metabolism by human cytochrome P450: Involvement of P450 3A and 2C Fprms in secondary metabolism and drug-protein adduct formation
Cuttle, L., Munns, A., Hogg, N., Scott, J. R., Hooper, W. D., Dickinson, R. G. and Gillam, E. M. J. (2000). Phenytoin metabolism by human cytochrome P450: Involvement of P450 3A and 2C Fprms in secondary metabolism and drug-protein adduct formation. Drug Metabolism and Disposition, 28 (8), 945-950.
2000
Conference Publication
Formation of indigo by recombinant mammalian cytochrome P450
Kim, D., Gillam, E. M. J., Aguinaldo, A. M., Notley, L., Mundkowski, R. G., Volkov, A. A., Arnold, F. H., Soucek, P., De Voss, J. J. and Guengerich, F. P. (2000). Formation of indigo by recombinant mammalian cytochrome P450. Joint meeting ASBMB/ASPET 2000, Boston, MA, USA, 4 - 8 June, 2000. USA: The Federation of American Societies for Experimental Biology.
2000
Journal Article
Association of CYP1B1 genetic polymorphism with incidence to breast and lung cancer
Watanabe, J., Shimada, T., Gillam, E. M. J., Ikuta, T., Suemasu, K., Higashi, Y., Gotoh, O. and Kawajiri, K. (2000). Association of CYP1B1 genetic polymorphism with incidence to breast and lung cancer. Pharmacogenetics, 10 (1), 25-33. doi: 10.1097/00008571-200002000-00004
2000
Conference Publication
Oxidation of indole by human cytochrome P450 enzymes
Guengerich, F. P., Cai, H., Notley, L., De Voss, J. J. and Gillam, E. M. J. (2000). Oxidation of indole by human cytochrome P450 enzymes. Joint meeting ASBMB/ASPET 2000, Boston, MA, USA, 4 - 8 June, 2000. BETHESDA: The Federation of American Societies for Experimental Biology.
2000
Conference Publication
Involvement of human P450s in the metabolic activation of heterocyclic amines using UMU tester strains
Oda, Y., Aryal, P., Gillam, E. M. J., Guengerich, F. P. and Shimada, T. (2000). Involvement of human P450s in the metabolic activation of heterocyclic amines using UMU tester strains. Meeting of the Environmental Mutagens Society, New Orleans, USA, April, 2000. USA:
2000
Journal Article
Oxidation of Indole by Cytochrome P450 Enzymes
Gillam, E. M. J., Notley, L. M., Cai, H. L., De Voss, J. J. and Guengerich, F. P. (2000). Oxidation of Indole by Cytochrome P450 Enzymes. Biochemistry, 39 (45), 13817-13824. doi: 10.1021/bi001229u
2000
Conference Publication
The biotransformation of tamoxifen by human vytochrome P450 enzymes leads to the production of potentially genotoxic metabolites
Notley, L., Crewe, K. H., Lennard, M. S. and Gillam, E. M. J. (2000). The biotransformation of tamoxifen by human vytochrome P450 enzymes leads to the production of potentially genotoxic metabolites. ASCEPT Annual Scientific Meeting 2000, Newcastle, Australia, 3 - 6 December, 2000. Sydney, Australia: ASCEPT.
2000
Journal Article
Transgenic xenosensors: humanizing mice
Gillam, E. M. J. (2000). Transgenic xenosensors: humanizing mice. Trends in Pharmacological Sciences, 21 (9), 330-331. doi: 10.1016/S0165-6147(00)01532-7
2000
Conference Publication
Use of recombinant human P450 enzymes in the studies of drug metabolism and chemical carcinogenesis
Shimada, T., Aryal, P., Gillam, E. M. J., Guengerich, F. P. and Oda, Y. (2000). Use of recombinant human P450 enzymes in the studies of drug metabolism and chemical carcinogenesis. Millennial World Congress of Pharmaceutical Sciences, San Francisco, USA, 16 - 20 April, 2000. USA:
2000
Conference Publication
Genetic deletion of glutathione S-Transferases Theta-1 (GSTT1) and MU-1 (GSTM1) and the aromatic anticonvulsant drug-induced hypersensitivity syndrome
Kinobe, R., Dickinson, R. G. and Gillam, E. M. J. (2000). Genetic deletion of glutathione S-Transferases Theta-1 (GSTT1) and MU-1 (GSTM1) and the aromatic anticonvulsant drug-induced hypersensitivity syndrome. ASCEPT Annual Scientific Meeting 2000, Newcastle, Australia, 3 - 6 December, 2000. Sydney, Australia: ASCEPT.
2000
Conference Publication
Examining tissue-specific bioactivation in vitro: Cytochrome P450 1B1 and other extrahepatic forms in the metabolism of carcinogens
Gillam, E. M. J., Notley, L., Guengerich, F. P., Shimada, T. and Lennard, M. S. (2000). Examining tissue-specific bioactivation in vitro: Cytochrome P450 1B1 and other extrahepatic forms in the metabolism of carcinogens. Pacifichem 2000 Proceedings, Honolulu, USA, 13 - 20 December, 2000. American Chemical Society.
2000
Journal Article
What makes P450s work? Searches for answers with known and new P450s*
Guengerich, F. P., Parikh, A., Yun, C., Kim, D., Nakamura, K., Notley, L. and Gillam, E. M. J. (2000). What makes P450s work? Searches for answers with known and new P450s*. Drug Metabolism Reviews, 32 (3-4), 267-281. doi: 10.1081/DMR-100102334
1999
Journal Article
Enhancement of cytochrome P-450 3A4 catalytic activities by cytochrome b(5) in bacterial membranes
Yamazaki, H, Nakajima, M, Nakamura, M, Asahi, S, Shimada, N, Gillam, EMJ, Guengerich, FP, Shimada, T and Yokoi, T (1999). Enhancement of cytochrome P-450 3A4 catalytic activities by cytochrome b(5) in bacterial membranes. Drug Metabolism and Disposition, 27 (9), 999-1004. doi: 10.1016/s0090-9556(24)15017-9
1999
Journal Article
Catalytic properties of polymorphic human cytochrome P450 1B1 variants
Shimada, Tsutomu, Watanabe, Junko, Kawajiri, Kaname, Sutter, Thomas R., Guengerich, F. Peter, Gillam, Elizabeth M. J. and Inoue, Kiyoshi (1999). Catalytic properties of polymorphic human cytochrome P450 1B1 variants. Carcinogenesis, 20 (8), 1607-1613. doi: 10.1093/carcin/20.8.1607
1999
Journal Article
Metabolism of Benzo(a)pyrene to trans-7,8Dihydroxy-7,8-dihydrobenzo(a)pyrene by Recombinant Human Cytochrome P450 1B1 and Purified Liver Epoxide Hydrolase
Shimada, Tsutomu, Gillam, Elizabeth M. J., Oda, Yoshimitsu, Tsumura, Fujiko, Sutter, Thomas R., Guengerich, F. Peter and Inoue, Kiyoshi (1999). Metabolism of Benzo(a)pyrene to trans-7,8Dihydroxy-7,8-dihydrobenzo(a)pyrene by Recombinant Human Cytochrome P450 1B1 and Purified Liver Epoxide Hydrolase. Chemical Research in Toxicology, 12 (7), 623-629. doi: 10.1021/tx990028s
1999
Journal Article
Formation of indigo by recombinant mammalian cytochrome P450
Gillam, E. M. J., Aguinaldo, A. M. A., Notley, L. M., Kim, D., Mundkowski, R. G., Volkov, A. A., Arnold, F. H., Soucek, P., DeVoss, J. J. and Guengerich, F. P. (1999). Formation of indigo by recombinant mammalian cytochrome P450. Biochemical and Biophysical Research Communications, 265 (2), 469-472. doi: 10.1006/bbrc.1999.1702
1998
Journal Article
Twenty years of biochemistry of human P450s - Purification, expression, mechanism, and relevance to drugs
Guengerich, FP, Hosea, NA, Parikh, A, Bell-Parikh, LC, Johnson, WW, Gillam, EMJ and Shimada, T (1998). Twenty years of biochemistry of human P450s - Purification, expression, mechanism, and relevance to drugs. Drug Metabolism and Disposition, 26 (12), 1175-1178.
1998
Journal Article
Analysis of cytochrome P450 2D6: Substrate interactions by site-directed mutagenesis
Hanna, I. H. and Gillam, E. M J (1998). Analysis of cytochrome P450 2D6: Substrate interactions by site-directed mutagenesis. FASEB Journal, 12 (8)
1998
Journal Article
Human cytochrome P450 enzymes expressed in bacteria: Reagents to probe molecular interactions in toxicology
Gillam, EMJ (1998). Human cytochrome P450 enzymes expressed in bacteria: Reagents to probe molecular interactions in toxicology. Clinical and Experimental Pharmacology and Physiology, 25 (11), 877-886. doi: 10.1111/j.1440-1681.1998.tb02338.x
Funding
Current funding
Supervision
Availability
- Professor Elizabeth Gillam is:
- Available for supervision
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Supervision history
Current supervision
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Doctor Philosophy
Development of Cytochrome P450 Enzymes as Biocatalysts for Metabolite and Novel Drug Candidate Synthesis for the Pharmaceutical Industry.
Principal Advisor
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Doctor Philosophy
Evolution of cytochrome P450 enzymes in response to dietary and environmental chemicals
Principal Advisor
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Doctor Philosophy
Insect P450s for degradation of polyethylene plastic
Principal Advisor
Other advisors: Associate Professor Paul Ebert
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Doctor Philosophy
Engineering cytochrome P450 family 4 enzymes for biocatalysis using ancestral sequence reconstruction
Principal Advisor
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Doctor Philosophy
Nano-scale bioreactors: virus-like particles used as reusable scaffolds for designer cytochrome P450 enzymes
Principal Advisor
Completed supervision
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2024
Doctor Philosophy
Coupling of P450 ancestors with the photosynthetic machinery of Chlamydomonas reinhardtii for light-driven biocatalysis in vitro
Principal Advisor
Other advisors: Dr Ian Ross, Professor Ben Hankamer
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2022
Doctor Philosophy
Ancestral reconstruction and characterisation of the CYP2U subfamily
Principal Advisor
Other advisors: Professor Mikael Boden
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2021
Doctor Philosophy
Engineering stable cytochrome P450 2D forms as competent biocatalysts for industrial applications
Principal Advisor
Other advisors: Professor Luke Guddat
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2021
Doctor Philosophy
Structural and functional characterisation of ancestral cytochromes P450 from family 2 in tetrapods
Principal Advisor
Other advisors: Professor Luke Guddat
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2020
Doctor Philosophy
Development and Characterisation of Cytochrome P450 Support Systems
Principal Advisor
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2020
Doctor Philosophy
Ancestral reconstruction of cytochrome P450 family 1, 4 and cytochrome P450 reductase: Insights into evolution and applications in biocatalysis
Principal Advisor
Other advisors: Professor Mikael Boden
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2013
Doctor Philosophy
Characterisation of the expression of indole-metabolising cytochrome P450 enzymes in the human brain
Principal Advisor
Other advisors: Dr Simon Worrall
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2012
Doctor Philosophy
Directed evolution of enzymes of cytochrome P450 catalysis: Evolving CYP1A, CYP2D and P450 reductase
Principal Advisor
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2011
Doctor Philosophy
Investigations of cytochromes P450 using the DNA family shuffling method.
Principal Advisor
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2007
Doctor Philosophy
REDOX PROPERTIES AND MEMBRANE LOCALIZATION OF HUMAN RECOMBINANT CYTOCHROME P450 SYSTEMS
Principal Advisor
Other advisors: Professor Paul Bernhardt
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2005
Doctor Philosophy
MOLECULAR BREEDING OF CYTOCHROME P450s FOR INDIGOID PIGMENT PRODUCTION
Principal Advisor
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2004
Doctor Philosophy
THE INITIATION OF AUTO-IMMUNE REACTIONS ON ANTI-CONVULSANT INDUCED HYPERSENSITIVITY: THE ROLE OF CYTOCHROME P450 ENZYMES
Principal Advisor
Other advisors: Dr Simon Worrall
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2023
Doctor Philosophy
Novel terpene based agrochemicals: Exploring cytochromes P450 mediated diversification of the strigolactone structure
Associate Advisor
Other advisors: Dr Birgitta Ebert
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2022
Doctor Philosophy
Methods for ancestral sequence reconstruction of large and complex protein families
Associate Advisor
Other advisors: Emeritus Professor Ross Barnard, Associate Professor Michael Landsberg, Professor Mikael Boden
Media
Enquiries
Contact Professor Elizabeth Gillam directly for media enquiries about:
- Bacterial expression
- Biocatalysis
- Bioremediation
- Chemical industries
- Drug discovery
- Drug metabolism
- Enzymes
- Human cytochrome P450 enzymes
- Molecular toxicology
- P450 enzymes
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