
Overview
Background
The molecular evolution of cytochrome P450 Enzymes: biological catalysts of unprecedented versatility.
Cytochrome P450 enzymes (CYPs, P450s) especially those responsible for drug metabolism in humans, are the unifying theme of the research in our lab. These fascinating enzymes are catalysts of exceptional versatility, and functional diversity. In humans they are principally responsible for the clearance of a practically unlimited variety of chemicals from the body, but are also critical in many important physiological processes. In other organisms (plants, animals, bacteria, fungi, almost everything!) they carry out an unprecedented range of functions, such as defense, chemical communication, neural development and even pigmentation. P450s are involved in the biosynthesis of an unequalled range of potent, biologically active natural products in microbes, plants and animals, including many antibiotics, plant and animal hormones, signalling molecules, toxins, flavours and fragrances. We are studying how P450s have evolved to deal with novel substrates by reconstructing ancestral precursors and evolutionary pathways, to answer such questions as how did the koala evolve to live on eucalyptus leaves, a toxic diet for most mammals.
The capabilities of P450s are only just coming to be fully recognized and structural studies on P450s should yield critical insights into how enzyme structure determines function. For example, recently we discovered that P450s are present within cells in the Fe(II) form, a finding that has led to a radical revision of the dogma concerning the P450 catalytic cycle, and has implications for the control of uncoupling of P450 activity in cells. Importantly, the biotechnological potential of P450s remains yet to be exploited. All of the specific research themes detailed below take advantage of our recognized expertise in the expression of recombinant human cytochrome P450 enzymes in bacteria. Our group is interested in finding out how P450s work and how they can be made to work better.
Artificial evolution of P450s for drug development and bioremediation: a way of exploring the sequence space and catalytic potential of P450s. The demonstrated catalytic diversity of P450 enzymes makes them the ideal starting material for engineering sophisticated chemical reagents to catalyse difficult chemical transformations. We are using artificial (or directed) evolution to engineer enzymes that are more efficient, robust and specialized than naturally occurring enzymes with the aim of selecting for properties that are commercially useful in the areas of drug discovery and development and bioremediation of pollutants in the environment. The approach we are using also allows us to explore the essential sequence and structural features that underpin all ~12000 known P450s so as to determine how they work.
Synthetic biology of enzymes for clean, green, solar-powered chemistry in drug development, bioremediation and biosensors. We have identified ancestral enzymes that are extremely thermostable compared to their modern counterparts, making them potentially very useful in industry, since they can withstand long incubations at elevated temperatures. They can be used as ‘off the shelf’ reagents to catalyse useful chemistry, such as in in drug discovery and development, fine chemicals synthesis, and cleaning up the environment. Working with drug companies, we are exploring how they can be best deployed in chemical processes and what structural features make them efficient, robust and specialized. We are also immobilizing P450s in virus-like-particles as ‘designer’ reagents that can be recovered from reactions and reused. To make such processes cheaper and more sustainable, we are using photosynthesis to power P450 reactions for clean, green biocatalysis in microalgae.
Biosketch:
After graduating from UQ with first class Honours in Biochemistry, Elizabeth took up a Royal Commission for the Exhibition of 1851 Overseas Scholarship to pursue doctoral work at Oxford University then undertook postdoctoral work at the Center in Molecular Toxicology and Department of Biochemistry at Vanderbilt University School of Medicine with Prof. F.P. Guengerich. She returned to UQ in 1993 to take up a position in Pharmacology and joined the School of Chemistry and Molecular Biosciences in 2009 as a Professor of Biochemistry.
Availability
- Professor Elizabeth Gillam is:
- Available for supervision
- Media expert
Fields of research
Qualifications
- Bachelor (Honours) of Science (Advanced), The University of Queensland
- Doctor of Philosophy, University of Oxford
Research interests
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Protein engineering
Enzymes such as cytochromes P450 are powerful, specific catalysts that could be very useful in making chemical industries more sustainable and environmentally benign. However naturally occurring enzymes usually cannot survive the long process times and elevated temperatures used in industry. We are engineering enzymes to be thermostable, to tolerate organic solvents and to use alternative cofactors so that they can be employed as designer biocatalysts for the pharmaceutical and other chemical industries.
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Synthetic Biology
We are developing novel systems for biocatalysis to replace energy-intensive steps in chemical processes, such as in the synthesis of drugs, with more sustainable alternatives using enzymes. We are engineering cytochrome P450 enzymes as biocatalysts, attaching them to protein cages and linking them to photosynthesis as a green energy source.
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Molecular evolution
Plants and the animals that consume them are locked in an evolutionary battle involving chemical warfare: plants produce toxins to discourage animals from eating them and in turn, animals develop enzymes to metabolise the plant toxins. We are studying the way enzymes in animals have evolved to respond to the changing chemical environment presented by plant secondary metabolism, processes that have a direct bearing on the ability of people to metabolise drugs and other environmental chemicals.
Research impacts
Our research is leading to the development of more sustainable, environmentally friendly, chemical processes to accelerate drug development and improve the safety of medicines. Our studies into the evolution of catalytic promiscuity in P450s reveal how organisms have evolved to deal with chemicals in the environment and provide insights as to how enzymes develop novel functions. More broadly, the methods that we have developed with colleagues at UQ and in industry for the ancestral reconstruction of P450s and their implementation as sophisticated biocatalysts in industry can be applied to the optimisation of other proteins and enzymes for biotechnological application.
Works
Search Professor Elizabeth Gillam’s works on UQ eSpace
1998
Journal Article
Recombinant human cytochrome P450 1B1 expression in Escherichia coli
Shimada, T, Wunsch, RM, Hanna, IH, Sutter, TR, Guengerich, FP and Gillam, EMJ (1998). Recombinant human cytochrome P450 1B1 expression in Escherichia coli. Archives of Biochemistry and Biophysics, 357 (1), 111-120. doi: 10.1006/abbi.1998.0808
1998
Conference Publication
Expression of human cytochrome P4501B1 in bacteria
Guengerich, FP, Shimada, T, Gillam, EMJ, Sutter, TR and Wunsch, RM (1998). Expression of human cytochrome P4501B1 in bacteria. BETHESDA: FEDERATION AMER SOC EXP BIOL.
1998
Conference Publication
Analysis of cytochrome P450 2D6 : substrate interactions by site-directed mutagenesis
Hanna, IH, Gillam, EMJ and Guengerich, FP (1998). Analysis of cytochrome P450 2D6 : substrate interactions by site-directed mutagenesis. BETHESDA: FEDERATION AMER SOC EXP BIOL.
1998
Journal Article
Bacterial expression of two human aryl sulfotransferases
Bidwell, L. M., Gillam, E. M. J., Gaedigk, A., Zhu, X., Grant, D. and McManus, M. E. (1998). Bacterial expression of two human aryl sulfotransferases. Chemico-biological Interactions, 109 (1-3), 137-141. doi: 10.1016/S0009-2797(97)00128-2
1997
Journal Article
Expression of cytochrome P450 3A7 in Escherichia coli: Effects of 5' modification and catalytic characterization of recombinant enzyme expressed in bicistronic format with NADPH-cytochrome P450 reductase
Gillam, EMJ, Wunsch, RM, Ueng, YF, Shimada, T, Reilly, PEB, Kamataki, T and Guengerich, FP (1997). Expression of cytochrome P450 3A7 in Escherichia coli: Effects of 5' modification and catalytic characterization of recombinant enzyme expressed in bicistronic format with NADPH-cytochrome P450 reductase. Archives of Biochemistry and Biophysics, 346 (1), 81-90. doi: 10.1006/abbi.1997.0286
1997
Journal Article
Bioactivation of Phenytoin by Human Cytochrome P450: Characterization of the Mechanism and Targets of Covalent Adduct Formation
Munns, Andrew J., De Voss, James J., Hooper, Wayne D., Dickinson, Ronald G. and Gillam, Elizabeth M. J. (1997). Bioactivation of Phenytoin by Human Cytochrome P450: Characterization of the Mechanism and Targets of Covalent Adduct Formation. Chemical Research In Toxicology, 10 (9), 1049-1058. doi: 10.1021/tx9700836
1997
Journal Article
Drug metabolism by Escherichia coli expressing human cytochromes P450
Parikh, A, Gillam, EMJ and Guengerich, FP (1997). Drug metabolism by Escherichia coli expressing human cytochromes P450. Nature Biotechnology, 15 (8), 784-788. doi: 10.1038/nbt0897-784
1997
Conference Publication
Comparison of reconstitution conditions for recombinant human P450 2C9 with systems containing P450S 1A1, 1A2, 2D6, 2E1, and 3A4. Effects of P450-P450 and P450-b(5) interactions
Yamazaki, H, Gillam, EMJ, Dong, MS, Johnson, WW, Guengerich, FP and Shimada, T (1997). Comparison of reconstitution conditions for recombinant human P450 2C9 with systems containing P450S 1A1, 1A2, 2D6, 2E1, and 3A4. Effects of P450-P450 and P450-b(5) interactions. BETHESDA: FEDERATION AMER SOC EXP BIOL.
1997
Conference Publication
Expression of P450 3A7 in Escherichia coli: Effects of 5' modification and catalytic characterization of the recombinant enzyme
Gillam, EMJ, Wunsch, RM, Ueng, YF, Shimada, T, Parikh, A, Kamataki, T and Guengerich, FP (1997). Expression of P450 3A7 in Escherichia coli: Effects of 5' modification and catalytic characterization of the recombinant enzyme. BETHESDA: FEDERATION AMER SOC EXP BIOL.
1997
Journal Article
Reconstitution of recombinant cytochrome P450 2C10(2C9) and comparison with cytochrome P450 3A4 and other forms: Effects of cytochrome P450-P450 and cytochrome P450-b5 interactions
Yamazaki, H, Gillam, EMJ, Dong, MS, Johnson, WW, Guengerich, FP and Shimada, T (1997). Reconstitution of recombinant cytochrome P450 2C10(2C9) and comparison with cytochrome P450 3A4 and other forms: Effects of cytochrome P450-P450 and cytochrome P450-b5 interactions. Archives of Biochemistry and Biophysics, 342 (2), 329-337. doi: 10.1006/abbi.1997.0125
1997
Journal Article
Oxidation of xenobiotics by recombinant human cytochrome P450 1B1
Shimada, T., Gillam, E. M. J., Sutter, T. R., Strickland, P. T., Guengerich, F. P. and Yamazaki, H. (1997). Oxidation of xenobiotics by recombinant human cytochrome P450 1B1. Drug Metabolism and Disposition, 25 (5), 617-622.
1996
Journal Article
Requirements for cytochrome b5 in the oxidation of 7-ethoxycoumarin, chlorzoxazone, aniline, and N-nitrosodimethylamine by recombinant cytochrome P450 2E1 and by human liver microsomes
Yamazaki, H, Nakano, M, Gillam, EMJ, Bell, LC, Guengerich, FP and Shimada, T (1996). Requirements for cytochrome b5 in the oxidation of 7-ethoxycoumarin, chlorzoxazone, aniline, and N-nitrosodimethylamine by recombinant cytochrome P450 2E1 and by human liver microsomes. Biochemical Pharmacology, 52 (2), 301-309. doi: 10.1016/0006-2952(96)00208-0
1996
Journal Article
New applications of bacterial systems to problems in toxicology
Guengerich, FP, Gillam, EMJ and Shimada, T (1996). New applications of bacterial systems to problems in toxicology. Critical Reviews in Toxicology, 26 (5), 551-583. doi: 10.3109/10408449609037477
1995
Journal Article
Expression of Cytochrome P450 2D6 in Escherichia coli, Purification, and Spectral and Catalytic Characterization
Gillam, Emj, Guo, ZY, Martin, MV, Jenkins, CM and Guengerich, FP (1995). Expression of Cytochrome P450 2D6 in Escherichia coli, Purification, and Spectral and Catalytic Characterization. Archives of Biochemistry and Biophysics, 319 (2), 540-550. doi: 10.1006/abbi.1995.1329
1995
Journal Article
Expression of Cytochrome-P450-3A5 in Escherichia-Coli - Effects of 5' Modification, Purification, Spectral Characterization, Reconstitution Conditions, and Catalytic Activities (Vol 317, Pg 374, 1995)
Gillam, Emj, Guo, ZY, Ueng, YF, Yamazaki, H, Cock, I, Reilly, Peb, Hooper, WD and Guengerich, FP (1995). Expression of Cytochrome-P450-3A5 in Escherichia-Coli - Effects of 5' Modification, Purification, Spectral Characterization, Reconstitution Conditions, and Catalytic Activities (Vol 317, Pg 374, 1995). Archives of Biochemistry and Biophysics, 318 (2), 498-498. doi: 10.1006/abbi.1995.1259
1995
Conference Publication
Retention of N-Formylmethionine in Recombinant Bacterial Cytochrome-P450 Enzymes Containing the N-Terminal Sequence Malllavfl
Dong, MS, Guo, Z, Philips, DR, Bell, LC, Howard, E, Blair, IA, Gillam, Emj, Baba, T, Waterman, MR and Guengerich, FP (1995). Retention of N-Formylmethionine in Recombinant Bacterial Cytochrome-P450 Enzymes Containing the N-Terminal Sequence Malllavfl. BETHESDA: FEDERATION AMER SOC EXP BIOL.
1995
Journal Article
Expression of cytochrome-p450-3a5 in escherichia coli: Effects of 5′ modification, purification, spectral characterization, reconstitution conditions, and catalytic activities
Gillam, Elizabeth M. J., Guo, Zuyu, Ueng, Yune-Fang, Yamazaki, Hiroshi, Cock, Ian, Reilly, Paul E. B., Hooper, Wayne D. and Guengerich, F. Peter (1995). Expression of cytochrome-p450-3a5 in escherichia coli: Effects of 5′ modification, purification, spectral characterization, reconstitution conditions, and catalytic activities. Archives of Biochemistry and Biophysics, 317 (2), 374-384. doi: 10.1006/abbi.1995.1177
1994
Journal Article
Activation of Procarcinogens by Human Cytochrome-P450 Enzymes Expressed in Escherichia-Coli - Simplified Bacterial Systems for Genotoxicity Assays
Shimada, T, Gillam, Emj, Sandhu, P, Guo, ZY, Tukey, RH and Guengerich, FP (1994). Activation of Procarcinogens by Human Cytochrome-P450 Enzymes Expressed in Escherichia-Coli - Simplified Bacterial Systems for Genotoxicity Assays. Carcinogenesis, 15 (11), 2523-2529. doi: 10.1093/carcin/15.11.2523
1994
Conference Publication
Expression and Purification of Human Cytochrome-P450 Enzymes From Escherichia-Coli
Guo, Z, Sandhu, P, Gillam, Emj, Martin, MV and Guengerich, FP (1994). Expression and Purification of Human Cytochrome-P450 Enzymes From Escherichia-Coli. BETHESDA: FEDERATION AMER SOC EXP BIOL.
1994
Journal Article
Expression of modified human cytochrome P450 2E1 in Escherichia coli, purification, and spectral and catalytic properties
Gillam, Emj, Guo, ZY and Guengerich, FP (1994). Expression of modified human cytochrome P450 2E1 in Escherichia coli, purification, and spectral and catalytic properties. Archives of Biochemistry and Biophysics, 312 (1), 59-66. doi: 10.1006/abbi.1994.1280
Funding
Current funding
Supervision
Availability
- Professor Elizabeth Gillam is:
- Available for supervision
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Supervision history
Current supervision
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Doctor Philosophy
Engineering cytochrome P450 family 4 enzymes for biocatalysis using ancestral sequence reconstruction
Principal Advisor
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Doctor Philosophy
Nano-scale bioreactors: virus-like particles used as reusable scaffolds for designer cytochrome P450 enzymes
Principal Advisor
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Doctor Philosophy
Development of Cytochrome P450 Enzymes as Biocatalysts for Metabolite and Novel Drug Candidate Synthesis for the Pharmaceutical Industry.
Principal Advisor
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Doctor Philosophy
Evolution of cytochrome P450 enzymes in response to dietary and environmental chemicals
Principal Advisor
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Doctor Philosophy
Insect P450s for degradation of polyethylene plastic
Principal Advisor
Other advisors: Associate Professor Paul Ebert
Completed supervision
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2024
Doctor Philosophy
Coupling of P450 ancestors with the photosynthetic machinery of Chlamydomonas reinhardtii for light-driven biocatalysis in vitro
Principal Advisor
Other advisors: Dr Ian Ross, Professor Ben Hankamer
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2022
Doctor Philosophy
Ancestral reconstruction and characterisation of the CYP2U subfamily
Principal Advisor
Other advisors: Professor Mikael Boden
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2021
Doctor Philosophy
Engineering stable cytochrome P450 2D forms as competent biocatalysts for industrial applications
Principal Advisor
Other advisors: Professor Luke Guddat
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2021
Doctor Philosophy
Structural and functional characterisation of ancestral cytochromes P450 from family 2 in tetrapods
Principal Advisor
Other advisors: Professor Luke Guddat
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2020
Doctor Philosophy
Development and Characterisation of Cytochrome P450 Support Systems
Principal Advisor
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2020
Doctor Philosophy
Ancestral reconstruction of cytochrome P450 family 1, 4 and cytochrome P450 reductase: Insights into evolution and applications in biocatalysis
Principal Advisor
Other advisors: Professor Mikael Boden
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2013
Doctor Philosophy
Characterisation of the expression of indole-metabolising cytochrome P450 enzymes in the human brain
Principal Advisor
Other advisors: Dr Simon Worrall
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2012
Doctor Philosophy
Directed evolution of enzymes of cytochrome P450 catalysis: Evolving CYP1A, CYP2D and P450 reductase
Principal Advisor
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2011
Doctor Philosophy
Investigations of cytochromes P450 using the DNA family shuffling method.
Principal Advisor
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2007
Doctor Philosophy
REDOX PROPERTIES AND MEMBRANE LOCALIZATION OF HUMAN RECOMBINANT CYTOCHROME P450 SYSTEMS
Principal Advisor
Other advisors: Professor Paul Bernhardt
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2005
Doctor Philosophy
MOLECULAR BREEDING OF CYTOCHROME P450s FOR INDIGOID PIGMENT PRODUCTION
Principal Advisor
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2004
Doctor Philosophy
THE INITIATION OF AUTO-IMMUNE REACTIONS ON ANTI-CONVULSANT INDUCED HYPERSENSITIVITY: THE ROLE OF CYTOCHROME P450 ENZYMES
Principal Advisor
Other advisors: Dr Simon Worrall
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2023
Doctor Philosophy
Novel terpene based agrochemicals: Exploring cytochromes P450 mediated diversification of the strigolactone structure
Associate Advisor
Other advisors: Dr Birgitta Ebert
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2022
Doctor Philosophy
Methods for ancestral sequence reconstruction of large and complex protein families
Associate Advisor
Other advisors: Emeritus Professor Ross Barnard, Associate Professor Michael Landsberg, Professor Mikael Boden
Media
Enquiries
Contact Professor Elizabeth Gillam directly for media enquiries about:
- Bacterial expression
- Biocatalysis
- Bioremediation
- Chemical industries
- Drug discovery
- Drug metabolism
- Enzymes
- Human cytochrome P450 enzymes
- Molecular toxicology
- P450 enzymes
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