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2003

Journal Article

Kinetic and phylogenetic characterization of an anaerobic dechlorinating microbial community

Rossetti, S, Blackall, LL, Majone, M, Hugenholtz, P, Plumb, JJ and Tandoi, V (2003). Kinetic and phylogenetic characterization of an anaerobic dechlorinating microbial community. Microbiology-sgm, 149 (2), 459-469. doi: 10.1099/mic.0.26018-0

Kinetic and phylogenetic characterization of an anaerobic dechlorinating microbial community

2002

Journal Article

Cultivation of globally distributed soil bacteria from phylogenetic lineages previously only detected in cultivation-independent surveys

Sait, M, Hugenholtz, P and Janssen, PH (2002). Cultivation of globally distributed soil bacteria from phylogenetic lineages previously only detected in cultivation-independent surveys. Environmental Microbiology, 4 (11), 654-666. doi: 10.1046/j.1462-2920.2002.00352.x

Cultivation of globally distributed soil bacteria from phylogenetic lineages previously only detected in cultivation-independent surveys

2002

Journal Article

Filamentous Chloroflexi (green non-sulfur bacteria) are abundant in wastewater treatment processes with biological nutrient removal

Bjornsson, Lovisa, Hugenholtz, Philip, Tyson, Gene W. and Blackall, Linda L. (2002). Filamentous Chloroflexi (green non-sulfur bacteria) are abundant in wastewater treatment processes with biological nutrient removal. Microbiology, 148 (8), 2309-2318. doi: 10.1099/00221287-148-8-2309

Filamentous Chloroflexi (green non-sulfur bacteria) are abundant in wastewater treatment processes with biological nutrient removal

2002

Journal Article

In situ studies of the phylogeny and physiology of filamentous bacteria with attached growth

Thomsen, TR, Kjellerup, BV, Nielsen, JL, Hugenholtz, P and Nielsen, PH (2002). In situ studies of the phylogeny and physiology of filamentous bacteria with attached growth. Environmental Microbiology, 4 (7), 383-391. doi: 10.1046/j.1462-2920.2002.00316.x

In situ studies of the phylogeny and physiology of filamentous bacteria with attached growth

2002

Journal Article

Molecular analysis of dimethyl sulphide dehydrogenase from Rhodovulum sulfidophilum: its place in the dimethyl sulphoxide reductase family of microbial molybdopterin-containing enzymes

McDevitt, Christopher A., Hugenholtz, Philip, Hanson, Graeme R. and McEwan, Alastair G. (2002). Molecular analysis of dimethyl sulphide dehydrogenase from Rhodovulum sulfidophilum: its place in the dimethyl sulphoxide reductase family of microbial molybdopterin-containing enzymes. Molecular Microbiology, 44 (6), 1575-1587. doi: 10.1046/j.1365-2958.2002.02978.x

Molecular analysis of dimethyl sulphide dehydrogenase from Rhodovulum sulfidophilum: its place in the dimethyl sulphoxide reductase family of microbial molybdopterin-containing enzymes

2002

Journal Article

The development and use of real-time PCR for the quantification of nitrifiers in activated sludge

Hall, S. J., Hugenholtz, P., Siyambalapitiya, N., Keller, J. and Blackall, L. L. (2002). The development and use of real-time PCR for the quantification of nitrifiers in activated sludge. Water Science And Technology, 46 (1-2), 267-272. doi: 10.2166/wst.2002.0488

The development and use of real-time PCR for the quantification of nitrifiers in activated sludge

2002

Book Chapter

Design and evaluation of 16S rRNA-targeted oligonucleotide probes for fluorescence in situ hybridisation (FISH)

Hugenholtz, P., Tyson, G. and Blackall, L. L. (2002). Design and evaluation of 16S rRNA-targeted oligonucleotide probes for fluorescence in situ hybridisation (FISH). Gene Probes - Principles and Protocols. (pp. 1-17) edited by Aquino de Muro. M and Rapley. R. London: Humana Press.

Design and evaluation of 16S rRNA-targeted oligonucleotide probes for fluorescence in situ hybridisation (FISH)

2002

Journal Article

Design and evaluation of 16S rRNA-targeted oligonucleotide probes for fluorescence in situ hybridization

Hugenholtz, P., Tyson, G. W. and Blackall, L. L. (2002). Design and evaluation of 16S rRNA-targeted oligonucleotide probes for fluorescence in situ hybridization. Methods in molecular biology (Clifton, N.J.), 179, 29-42.

Design and evaluation of 16S rRNA-targeted oligonucleotide probes for fluorescence in situ hybridization

2002

Journal Article

The DMSO reductase family of microbial molybdenum enzymes; Molecular properties and role in the dissimilatory reduction of toxic elements

McEwan, A. G., Ridge, J. P., McDevitt, C. A. and Hugenholtz, P. (2002). The DMSO reductase family of microbial molybdenum enzymes; Molecular properties and role in the dissimilatory reduction of toxic elements. Geomicrobiology Journal, 19 (1), 3-21. doi: 10.1080/014904502317246138

The DMSO reductase family of microbial molybdenum enzymes; Molecular properties and role in the dissimilatory reduction of toxic elements

2002

Journal Article

Exploring prokaryotic diversity in the genomic era

Hugenholtz, P (2002). Exploring prokaryotic diversity in the genomic era. Genome Biology, 3 (2) 0003, REVIEWS0003. doi: 10.1186/gb-2002-3-2-reviews0003

Exploring prokaryotic diversity in the genomic era

2001

Journal Article

Multiple lateral transfers of dissimilatory sulfite reductase genes between major lineages of sulfate-reducing prokaryotes

Klein, M., Friedrich, M., Roger, A. J., Hugenholtz, P., Fishbain, S., Abicht, H., Blackall, L. L., Stahl, D. A. and Wagner, M. (2001). Multiple lateral transfers of dissimilatory sulfite reductase genes between major lineages of sulfate-reducing prokaryotes. Journal of Bacteriology, 183 (20), 6028-6035. doi: 10.1128/JB.183.20.6028-6035.2001

Multiple lateral transfers of dissimilatory sulfite reductase genes between major lineages of sulfate-reducing prokaryotes

2001

Journal Article

Investigation of candidate division TM7, a recently recognized major lineage of the domain bacteria with no known pure-culture representatives

Hugenholtz, Philip, Tyson, Gene W., Webb, Richard I., Wagner, Ankia M. and Blackall, Linda L. (2001). Investigation of candidate division TM7, a recently recognized major lineage of the domain bacteria with no known pure-culture representatives. Applied And Environmental Microbiology, 67 (1), 411-419. doi: 10.1128/AEM.67.1.411-419.2001

Investigation of candidate division TM7, a recently recognized major lineage of the domain bacteria with no known pure-culture representatives

2001

Journal Article

A multiple-outgroup approach to resolving division-level phylogenetic relationships using 16S rDNA data

Dalevi, D, Hugenholtz, P and Blackall, LL (2001). A multiple-outgroup approach to resolving division-level phylogenetic relationships using 16S rDNA data. International Journal of Systematic And Evolutionary Microbiology, 51 (2), 385-391. doi: 10.1099/00207713-51-2-385

A multiple-outgroup approach to resolving division-level phylogenetic relationships using 16S rDNA data

2000

Journal Article

Identification of polyphosphate-accumulating organisms and design of 16S rRNA-directed Probes for their detection and quantitation

Crocetti, GR, Hugenholtz, P, Bond, PL, Schuler, A, Keller, J, Jenkins, D and Blackall, LL (2000). Identification of polyphosphate-accumulating organisms and design of 16S rRNA-directed Probes for their detection and quantitation. Applied and Environmental Microbiology, 66 (3), 1175-1182. doi: 10.1128/AEM.66.3.1175-1182.2000

Identification of polyphosphate-accumulating organisms and design of 16S rRNA-directed Probes for their detection and quantitation

2000

Journal Article

Microorganisms should be high on DNA preservation list

Fuerst, J. A. and Hugenholtz, P. (2000). Microorganisms should be high on DNA preservation list. Science, 290 (5496), 1503-1503. doi: 10.1126/science.290.5496.1503b

Microorganisms should be high on DNA preservation list

2000

Conference Publication

Real-Time PCR: Can it accurately assess specific members in a mixed microbial community

Blackall, L. L., Hall, S. J., Hugenholtz, P., Keller, J. and Siyambalapitiya, N. (2000). Real-Time PCR: Can it accurately assess specific members in a mixed microbial community. 4th Annual Australian Environmental Engineering Research Event, Victor Harbor, South Australia, Australia, 21-24 November, 2000. Australia: EERE Organising Committee.

Real-Time PCR: Can it accurately assess specific members in a mixed microbial community

2000

Conference Publication

Diverted Cultivation of Phylogenetically Novell Bacteria

Hugenholtz, Phil (2000). Diverted Cultivation of Phylogenetically Novell Bacteria. ICCC9 9th International Congress for Culture Collections, Brisbane, Australia, 23-28 July, 2000. Australia: UQ Press/World Federation for Culture Studies.

Diverted Cultivation of Phylogenetically Novell Bacteria

1999

Journal Article

Diversity of radA genes from cultured and uncultured Archaea: Comparative analysis of putative RadA proteins and their use as a phylogenetic marker

Sandler, S. J., Hugenholtz, P., Schleper, C., DeLong, E. F., Pace, N. R. and Clark, A. J. (1999). Diversity of radA genes from cultured and uncultured Archaea: Comparative analysis of putative RadA proteins and their use as a phylogenetic marker. Journal of Bacteriology, 181 (3), 907-915.

Diversity of radA genes from cultured and uncultured Archaea: Comparative analysis of putative RadA proteins and their use as a phylogenetic marker

1999

Conference Publication

The microbiology of biological nutrient removal - latest discoveries and developments

Blackall, L. L., Bond, P. L., Burrell, P. C., Crocetti, G. and Hugenholtz, P. (1999). The microbiology of biological nutrient removal - latest discoveries and developments. IBC Conference on Advanced Wastewater and Sludge Treatment, Sydney, Australia, 27-28 Jan 1999. not available: not available.

The microbiology of biological nutrient removal - latest discoveries and developments

1999

Conference Publication

The determination of the bacteria involved in biological phosphorus removal from wastewater

Blackall, L. L., Bond, P. L., Crocetti, G., Hugenholtz, P., Jenkins, D., Keller, J. and Schuler, A. (1999). The determination of the bacteria involved in biological phosphorus removal from wastewater. IXth International Congress of Bacteriology and Applied Microbiology, Sydney, August 2-6, 1999.

The determination of the bacteria involved in biological phosphorus removal from wastewater