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2015 Journal Article A bioinformatics tool for epitope-based vaccine design that accounts for human ethnic diversity: Application to emerging infectious diseases.Oyarzun, Patricio, Ellis, Jonathan J., Gonzalez-Galarza, Faviel F., Jones, Andrew R, Middleton, Derek, Boden, Mikael and Kobe, Bostjan (2015). A bioinformatics tool for epitope-based vaccine design that accounts for human ethnic diversity: Application to emerging infectious diseases.. Vaccine, 33 (10), 1267-1273. doi: 10.1016/j.vaccine.2015.01.040 |
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2014 Journal Article Structure and function of Toll/interleukin-1 receptor/resistance protein (TIR) domains.Ve, Thomas, Williams, Simon J. and Kobe, Bostjan (2014). Structure and function of Toll/interleukin-1 receptor/resistance protein (TIR) domains.. Apoptosis, 20 (2), 250-261. doi: 10.1007/s10495-014-1064-2 |
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2014 Journal Article Dynamics of re-constitution of the human nuclear proteome after cell division is regulated by NLS-adjacent phosphorylationRoona, Gergely, Borsos, Mate, Ellis, Jonathan J., Mehdi, Ahmed M., Christie, Mary, Koornyei, Zsuzsanna, Neubrandt, Mate, Tooth, Judit, Bozooky, Zoltan, Buday, Laszlo, Madaraasz, Emilia, Bodaen, Mikael, Kobe, Bostjan and Veertessy, Beata G. (2014). Dynamics of re-constitution of the human nuclear proteome after cell division is regulated by NLS-adjacent phosphorylation. Cell Cycle, 13 (22), 3551-3564. doi: 10.4161/15384101.2014.960740 |
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2014 Journal Article Diversity and variability of NOD-like receptors in fungiDyrka, Witold, Lamacchia, Marina, Durrens, Pascal, Kobe, Bostjan, Daskalov, Asen, Paoletti, Matthieu, Sherman, David J. and Saupe, Sven J. (2014). Diversity and variability of NOD-like receptors in fungi. Genome Biology and Evolution, 6 (12), 3137-3158. doi: 10.1093/gbe/evu251 |
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2014 Journal Article Recombinant production of functional full-length and truncated human TRAM/TICAM-2 adaptor protein involved in toll-like receptor and interferon signalingObayed Ullah, M., Valkov, Eugene, Ve, Thomas, Williams, Simon, Mas, Caroline, Mansell, Ashley and Kobe, Bostjan (2014). Recombinant production of functional full-length and truncated human TRAM/TICAM-2 adaptor protein involved in toll-like receptor and interferon signaling. Protein Expression and Purification, 106, 31-40. doi: 10.1016/j.pep.2014.09.019 |
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2014 Journal Article PhosphoPICK: modelling cellular context to map kinase-substrate phosphorylation eventsPatrick, Ralph, Lê Cao, Kim-Anh, Kobe, Bostjan and Bodén, Mikael (2014). PhosphoPICK: modelling cellular context to map kinase-substrate phosphorylation events. Bioinformatics, 31 (3), 382-389. doi: 10.1093/bioinformatics/btu663 |
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2014 Journal Article The nuclear immune receptor RPS4 is required for RRS1SLH1-dependent constitutive defense activation in Arabidopsis thaliana.Sohn, Kee Hoon, Segonzac, Cecile, Rallapalli, Ghanasyam, Sarris, Panagiotis F., Woo, Joo Yong, Williams, Simon J., Newman, Toby E., Paek, Kyung Hee, Kobe, Bostjan and Jones, Jonathan D. G. (2014). The nuclear immune receptor RPS4 is required for RRS1SLH1-dependent constitutive defense activation in Arabidopsis thaliana.. PLoS Genetics, 10 (10), e1004655. doi: 10.1371/journal.pgen.1004655 |
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2014 Journal Article Factors influencing nucleo-cytoplasmic trafficking: which matter? Response to Alvisi & Jans' comment on Phosphorylation adjacent to the nuclear localization signal of human dUTPase abolishes nuclear import: structural and mechanistic insightsRóna, Gergely, Borsos, Máté, Kobe, Bostjan and Vértessy, Beáta G. (2014). Factors influencing nucleo-cytoplasmic trafficking: which matter? Response to Alvisi & Jans' comment on Phosphorylation adjacent to the nuclear localization signal of human dUTPase abolishes nuclear import: structural and mechanistic insights. Acta Crystallographica. Section D: Biological Crystallography, 70 (10), 2777-2778. doi: 10.1107/S1399004714020501 |
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2014 Journal Article The TLR signaling adaptor TRAM interacts with TRAF6 to mediate activation of the inflammatory response by TLR4Verstak, Brett, Stack, Julianne, Ve, Thomas, Mangan, Matthew, Hjerrild, Kathryn, Jeon, Jannah, Stahl, Rainer, Latz, Eicke, Gay, Nick, Kobe, Bostjan, Bowie, Andrew G. and Mansell, Ashley (2014). The TLR signaling adaptor TRAM interacts with TRAF6 to mediate activation of the inflammatory response by TLR4. Journal of Leukocyte Biology, 96 (3), 427-436. doi: 10.1189/jlb.2A0913-487R |
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2014 Journal Article Structural basis for assembly and function of a heterodimeric plant immune receptorWilliams, Simon J., Sohn, Kee Hoon, Wan, Li, Bernoux, Maud, Sarris, Panagiotis, Segonzac, Cecile, Ve, Thomas, Ma, Yan, Saucet, Simon B., Ericsson, Daniel J., Casey, Lachlan W., Lonhienne, Thierry, Winzor, Donald J., Zhang, Xiaoxiao, Coerdt, Anne, Parker, Jane E., Dodds, Peter N., Kobe, Bostjan and Jones, Jonathan D. G. (2014). Structural basis for assembly and function of a heterodimeric plant immune receptor. Science, 344 (6181), 299-303. doi: 10.1126/science.1247357 |
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2014 Journal Article Structural basis of interaction of bipartite nuclear localization signal from Agrobacterium VirD2 with rice importin-alphaChang, Chiung-Wen, Williams, Simon J., Couñago, Rafael Miguez and Kobe, Bostjan (2014). Structural basis of interaction of bipartite nuclear localization signal from Agrobacterium VirD2 with rice importin-alpha. Molecular Plant, Advance Access (6), 1-10. doi: 10.1093/mp/ssu014 |
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2014 Journal Article AdcA and AdcAII employ distinct zinc acquisition mechanisms and contribute additively to zinc homeostasis in Streptococcus pneumoniaePlumptre, Charles D., Eijkelkamp, Bart A., Morey, Jacqueline R., Behr, Felix, Couñago, Rafael M., Ogunniyi, Abiodun D., Kobe, Bostjan, O'Mara, Megan L., Paton, James C. and McDevitt, Christopher A. (2014). AdcA and AdcAII employ distinct zinc acquisition mechanisms and contribute additively to zinc homeostasis in Streptococcus pneumoniae. Molecular Microbiology, 91 (4), 834–851-834–851. doi: 10.1111/mmi.12504 |
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2014 Journal Article Small-Angle X-Ray Scattering for the Discerning Macromolecular CrystallographerCasey, Lachlan W., Mark, Alan E. and Kobe, Bostjan (2014). Small-Angle X-Ray Scattering for the Discerning Macromolecular Crystallographer. Australian Journal of Chemistry, 67 (12), 1786-1792. doi: 10.1071/CH14396 |
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2014 Journal Article Imperfect coordination chemistry facilitates metal ion release in the Psa permeaseCouñago, Rafael M., Ween, Miranda P., Begg, Stephanie L., Bajaj, Megha, Zuegg, Johannes, O'Mara, Megan L., Cooper, Matthew A., McEwan, Alastair G., Paton, James C., Kobe, Bostjan and McDevitt, Christopher A. (2014). Imperfect coordination chemistry facilitates metal ion release in the Psa permease. Nature Chemical Biology, 10 (1), 35-41. doi: 10.1038/nCHeMBIO.1382 |
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2014 Journal Article International Year of CrystallographyBatten, Stuart R., Kobe, Bostjan and Guddat, Luke (2014). International Year of Crystallography. Australian Journal of Chemistry, 67 (12), 1718-1719. doi: 10.1071/CH14557 |
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2013 Journal Article Structural characterisation of the nuclear import receptor importin alpha in complex with the bipartite NLS of Prp20Roman, Noelia, Christie, Mary, Swarbrick, Crystall M. D., Kobe, Bostjan and Forwood, Jade K. (2013). Structural characterisation of the nuclear import receptor importin alpha in complex with the bipartite NLS of Prp20. PLoS One, 8 (12) e82038, e82038.1-e82038.6. doi: 10.1371/journal.pone.0082038 |
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2013 Journal Article Phosphorylation adjacent to the nuclear localization signal of human dUTPase abolishes nuclear import: Structural and mechanistic insightsRona, G., Marfori, M., Borsos, M., Scheer, I., Takacs, E., Toth, J., Babos, F., Magyar, A., Erdei, A., Bozoky, Z., Buday, L., Kobe, B. and Vertessy, B.G. (2013). Phosphorylation adjacent to the nuclear localization signal of human dUTPase abolishes nuclear import: Structural and mechanistic insights. Acta Crystallographica Section D: Biological Crystallography, 69 (12), 2495-2505. doi: 10.1107/S0907444913023354 |
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2013 Journal Article The TLR signalling adaptor TRIF/TICAM-1 has an N-terminal helical domain with structural similarity to IFIT proteinsUllah, M. Obayed, Ve, Thomas, Mangan, Matthew, Alaidarous, Mohammed, Sweet, Matthew J., Mansell, Ashley and Kobe, Bostjan (2013). The TLR signalling adaptor TRIF/TICAM-1 has an N-terminal helical domain with structural similarity to IFIT proteins. Acta Crystallographica Section D: Biological Crystallography, 69 (12), 2420-2430. doi: 10.1107/S0907444913022385 |
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2013 Journal Article Mechanism of bacterial interference with TLR4 signaling by Brucella TIR-domain-containing protein TcpBAlaidarous, Mohammed Abdullah, Ve, Thomas, Casey, Lachlan, Valkov, Eugene, Ericsson, Daniel, Obayed, Ullah, M., Schembri, Mark A., Mansell, Ashley, Sweet, Matthew J. and Kobe, Bostjan (2013). Mechanism of bacterial interference with TLR4 signaling by Brucella TIR-domain-containing protein TcpB. Journal of Biological Chemistry, 289 (2), 654-668. doi: 10.1074/jbc.M113.523274 |
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2013 Journal Article Crystallization and preliminary X-ray diffraction analyses of the TIR domains of three TIR-NB-LRR proteins that are involved in disease resistance in Arabidopsis thalianaWan, Li, Zhang, Xiaoxiao, Williams, Simon J., Ve, Thomas, Bernoux, Maud, Sohn, Kee Hoon, Jones, Jonathan D. G., Dodds, Peter N. and Kobe, Bostjan (2013). Crystallization and preliminary X-ray diffraction analyses of the TIR domains of three TIR-NB-LRR proteins that are involved in disease resistance in Arabidopsis thaliana. Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 69 (11), 1275-1280. doi: 10.1107/S1744309113026614 |
