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2019

Journal Article

7T GRE-MRI signal compartments are sensitive to dysplastic tissue in focal epilepsy

Thapaliya, Kiran, Urriola, Javier, Barth, Markus, Reutens, David C., Bollmann, Steffen and Vegh, Viktor (2019). 7T GRE-MRI signal compartments are sensitive to dysplastic tissue in focal epilepsy. Magnetic Resonance Imaging, 61, 1-8. doi: 10.1016/j.mri.2019.05.011

7T GRE-MRI signal compartments are sensitive to dysplastic tissue in focal epilepsy

2019

Journal Article

DeepQSM - using deep learning to solve the dipole inversion for quantitative susceptibility mapping

Bollmann, Steffen, Rasmussen, Kasper Gade Bøtker, Kristensen, Mads, Blendal, Rasmus Guldhammer, Østergaard, Lasse Riis, Plocharski, Maciej, O'Brien, Kieran, Langkammer, Christian, Janke, Andrew and Barth, Markus (2019). DeepQSM - using deep learning to solve the dipole inversion for quantitative susceptibility mapping. NeuroImage, 195, 373-383. doi: 10.1016/j.neuroimage.2019.03.060

DeepQSM - using deep learning to solve the dipole inversion for quantitative susceptibility mapping

2019

Conference Publication

Quantitative susceptibility mapping for routine clinical use – an inline automated QSM reconstruction pipeline

Stewart, Ashley, O'Brien, Kieran, Kim, Jinsuh, Maréchal, Bénédicte, Nasrallah, Fatima, Kean, Michael, Barth, Markus and Bollmann, Steffen (2019). Quantitative susceptibility mapping for routine clinical use – an inline automated QSM reconstruction pipeline. ISMRM 2019, Montreal, Canada, 11-16 May 2019. Concord, CA United States: International Society for Magnetic Resonance in Medicine.

Quantitative susceptibility mapping for routine clinical use – an inline automated QSM reconstruction pipeline

2019

Journal Article

SHARQnet – Sophisticated harmonic artifact reduction in quantitative susceptibility mapping using a deep convolutional neural network

Bollmann, Steffen, Kristensen, Matilde Holm, Larsen, Morten Skaarup, Olsen, Mathias Vassard, Pedersen, Mads Jozwiak, Østergaard, Lasse Riis, O’Brien, Kieran, Langkammer, Christian, Fazlollahi, Amir and Barth, Markus (2019). SHARQnet – Sophisticated harmonic artifact reduction in quantitative susceptibility mapping using a deep convolutional neural network. Zeitschrift für Medizinische Physik, 29 (2), 139-149. doi: 10.1016/j.zemedi.2019.01.001

SHARQnet – Sophisticated harmonic artifact reduction in quantitative susceptibility mapping using a deep convolutional neural network

2018

Conference Publication

7T GRE-MRI frequency shifts obtained from signal compartments can differentiate normal from dysplastic tissue in focal epilepsy

Thapaliya, Kiran, Barth, Markus, Bollmann, Steffen, Reutens, David and Vegh, Viktor (2018). 7T GRE-MRI frequency shifts obtained from signal compartments can differentiate normal from dysplastic tissue in focal epilepsy. ISMRM, Paris, France, 16-21 June 2018.

7T GRE-MRI frequency shifts obtained from signal compartments can differentiate normal from dysplastic tissue in focal epilepsy

2018

Conference Publication

Improving FLAIR SAR efficiency by predicting B1-maps at 7T from a standard localizer scan using deep convolutional neural networks

Bollmann, Steffen, Kelly, Samuel, Vegh, Viktor, Rodell, Anders, Tesiram, Yas, Barth, Markus and O'Brien, Kieran (2018). Improving FLAIR SAR efficiency by predicting B1-maps at 7T from a standard localizer scan using deep convolutional neural networks. ISMRM, Paris, France, 17-21 June 2018.

Improving FLAIR SAR efficiency by predicting B1-maps at 7T from a standard localizer scan using deep convolutional neural networks

2018

Conference Publication

Myelin water fraction across the corpus callosum using multi-echo gradient echo at 7T - influence of model settings and flip angle

Thapaliya, Kiran, Vegh, Viktor, Bollmann, Steffen and Barth, Markus (2018). Myelin water fraction across the corpus callosum using multi-echo gradient echo at 7T - influence of model settings and flip angle. ISMRM, Paris, France, 16-21 June 2018.

Myelin water fraction across the corpus callosum using multi-echo gradient echo at 7T - influence of model settings and flip angle

2017

Journal Article

Assessment of microstructural signal compartments across the corpus callosum using multi-echo gradient recalled echo at 7 T

Thapaliya, Kiran, Vegh, Viktor, Bollmann, Steffen and Barth, Markus (2017). Assessment of microstructural signal compartments across the corpus callosum using multi-echo gradient recalled echo at 7 T. NeuroImage, 182, 407-416. doi: 10.1016/j.neuroimage.2017.11.029

Assessment of microstructural signal compartments across the corpus callosum using multi-echo gradient recalled echo at 7 T

2017

Journal Article

Real-Time Clustered Multiple Signal Classification (RTC-MUSIC)

Dinh, Christoph, Esch, Lorenz, Rühle, Johannes, Bollmann, Steffen, Güllmar, Daniel, Baumgarten, Daniel, Hämäläinen, Matti S. and Haueisen, Jens (2017). Real-Time Clustered Multiple Signal Classification (RTC-MUSIC). Brain Topography, 31 (1), 125-128. doi: 10.1007/s10548-017-0586-7

Real-Time Clustered Multiple Signal Classification (RTC-MUSIC)

2017

Journal Article

The challenge of bias-free coil combination for quantitative susceptibility mapping at ultra-high field

Bollmann, Steffen, Robinson, Simon Daniel, O'Brien, Kieran, Vegh, Viktor, Janke, Andrew, Marstaller, Lars, Reutens, David and Barth, Markus (2017). The challenge of bias-free coil combination for quantitative susceptibility mapping at ultra-high field. Magnetic Resonance in Medicine, 79 (1), 97-107. doi: 10.1002/mrm.26644

The challenge of bias-free coil combination for quantitative susceptibility mapping at ultra-high field

2017

Journal Article

The PhysIO toolbox for modeling physiological noise in fMRI data

Kasper, Lars, Bollmann, Steffen, Diaconescu, Andreea O., Hutton, Chloe, Heinzle, Jakob, Iglesias, Sandra, Hauser, Tobias U., Sebold, Miriam, Manjaly, Zina-Mary, Pruessmann, Klaas P. and Stephan, Klaas E. (2017). The PhysIO toolbox for modeling physiological noise in fMRI data. Journal of Neuroscience Methods, 276, 56-72. doi: 10.1016/j.jneumeth.2016.10.019

The PhysIO toolbox for modeling physiological noise in fMRI data

2017

Other Outputs

MP2RAGE T1-weighted average 7T model

Bollmann, Steffen, Janke, Andrew, Marstaller, Lars, Reutens, David, O'Brien, Kieran and Barth, Markus (2017). MP2RAGE T1-weighted average 7T model. The University of Queensland. (Dataset) doi: 10.14264/uql.2017.266

MP2RAGE T1-weighted average 7T model

2017

Other Outputs

GRE and QSM average 7T model

Bollmann, Steffen, Janke, Andrew, Marstaller, Lars, Reutens, David, O'Brien, Kieran and Barth, Markus (2017). GRE and QSM average 7T model. The University of Queensland. (Dataset) doi: 10.14264/uql.2017.178

GRE and QSM average 7T model

2017

Conference Publication

Deep Mapping: Using deep convolutional neural networks to estimate quantitative T1 maps trained on a 7 T minimum deformation average model

Bollmann, Steffen, Andrew Janke and Markus Barth (2017). Deep Mapping: Using deep convolutional neural networks to estimate quantitative T1 maps trained on a 7 T minimum deformation average model. ISMRM, Honolulu, 22-27 April 2017.

Deep Mapping: Using deep convolutional neural networks to estimate quantitative T1 maps trained on a 7 T minimum deformation average model

2017

Other Outputs

Turbo Spin Echo average 7T model

Bollmann, Steffen, Janke, Andrew, Marstaller, Lars, Reutens, David, O'Brien, Kieran and Barth, Markus (2017). Turbo Spin Echo average 7T model. The University of Queensland. (Dataset) doi: 10.14264/uql.2017.267

Turbo Spin Echo average 7T model

2017

Conference Publication

Non-Linear Realignment Using Minimum Deformation Averaging for Single-Subject FMRI at Ultra-High Field

Saskia Bollmann, Steffen Bollmann, Alex Puckett, Andrew Janke and Markus Barth (2017). Non-Linear Realignment Using Minimum Deformation Averaging for Single-Subject FMRI at Ultra-High Field. ISMRM, Honolulu, 22-27 April 2017.

Non-Linear Realignment Using Minimum Deformation Averaging for Single-Subject FMRI at Ultra-High Field

2017

Conference Publication

Contrast Matching of Ultra-High Resolution Minimum Deformation Averaged MRI Models to Facilitate Computation of a Multi-Modal Model of the Human Brain

J. Munk, N. Jacobsen, M. Plocharski, L. R. Østergaard, M. Barth, A. Janke and S. Bollmann (2017). Contrast Matching of Ultra-High Resolution Minimum Deformation Averaged MRI Models to Facilitate Computation of a Multi-Modal Model of the Human Brain. ISMRM, Honolulu, 22-27 April 2017.

Contrast Matching of Ultra-High Resolution Minimum Deformation Averaged MRI Models to Facilitate Computation of a Multi-Modal Model of the Human Brain

2017

Conference Publication

Signal Compartments Mapped from Multi-Echo Gradient Recalled Echo Data Vary across the Corpus Callosum

Kiran Thapaliya, S. Bollmann, V. Vegh and M. Barth (2017). Signal Compartments Mapped from Multi-Echo Gradient Recalled Echo Data Vary across the Corpus Callosum. ISMRM, Honolulu, 22-27 April 2017.

Signal Compartments Mapped from Multi-Echo Gradient Recalled Echo Data Vary across the Corpus Callosum

2016

Journal Article

Accelerated mapping of magnetic susceptibility using 3D planes-on-a-paddlewheel (POP) EPI at ultra-high field strength

Stäb, Daniel, Bollmann, Steffen, Langkammer, Christian, Bredies, Kristian and Barth, Markus (2016). Accelerated mapping of magnetic susceptibility using 3D planes-on-a-paddlewheel (POP) EPI at ultra-high field strength. NMR in Biomedicine, 30 (4) e3620, e3620. doi: 10.1002/nbm.3620

Accelerated mapping of magnetic susceptibility using 3D planes-on-a-paddlewheel (POP) EPI at ultra-high field strength

2016

Journal Article

Echo time-dependent quantitative susceptibility mapping contains information on tissue properties

Sood, Surabhi, Urriola, Javier, Reutens, David C., O'Brien, Kieran, Bollmann, Steffen, Barth, Markus and Vegh, Viktor (2016). Echo time-dependent quantitative susceptibility mapping contains information on tissue properties. Magnetic Resonance in Medicine, 77 (5), 1946-1958. doi: 10.1002/mrm.26281

Echo time-dependent quantitative susceptibility mapping contains information on tissue properties