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2024

Conference Publication

QSM-CI: An automated continuous QSM challenge

Stewart, Ashley, Eckstein, Korbinian, Dao, Thuy Thanh and Bollmann, Steffen (2024). QSM-CI: An automated continuous QSM challenge. 2024 ISMRM & ISMRT Annual Meeting, Singapore, 4-9 May 2024. Concord, CA United States: ISMRM. doi: 10.58530/2024/4827

QSM-CI: An automated continuous QSM challenge

2024

Conference Publication

Fast, High-resolution Whole Brain SWI and QSM with CAIPIRINHA 3D-EPI and Deep Learning Reconstruction

Jin, Jin, Nickel, Dominik, Pfeuffer, Josef, Tourell, Monique, Stewart, Ashley, Bollmann, Steffen, Bollmann, Saskia, Barth, Markus and O‘Brien, Kieran (2024). Fast, High-resolution Whole Brain SWI and QSM with CAIPIRINHA 3D-EPI and Deep Learning Reconstruction. 2024 ISMRM & ISMRT Annual Meeting, Singapore, 4-9 May 2024. Concord, CA United States: ISMRM. doi: 10.58530/2024/2822

Fast, High-resolution Whole Brain SWI and QSM with CAIPIRINHA 3D-EPI and Deep Learning Reconstruction

2023

Conference Publication

Developing a secure, browser-based and interactive image segmentation system for medical images

Dao, Thuy, Rorden, Chris, Eckstein, Korbinian, Haehn, Daniel, Varade, Shruti and Bollmann, Steffen (2023). Developing a secure, browser-based and interactive image segmentation system for medical images. International Society for Magnetic Resonance in Medicine ANZ Chapter, Brisbane, QLD, Australia, 30 November - 1 December 2023.

Developing a secure, browser-based and interactive image segmentation system for medical images

2023

Journal Article

Super-resolution QSM in little or No Additional Time for Imaging (NATIve) using 2D EPI imaging in 3 orthogonal planes

Bachrata, Beata, Bollmann, Steffen, Jin, Jin, Tourell, Monique, Dal-Bianco, Assunta, Trattnig, Siegfried, Barth, Markus, Ropele, Stefan, Enzinger, Christian and Robinson, Simon Daniel (2023). Super-resolution QSM in little or No Additional Time for Imaging (NATIve) using 2D EPI imaging in 3 orthogonal planes. NeuroImage, 283 120419, 1-17. doi: 10.1016/j.neuroimage.2023.120419

Super-resolution QSM in little or No Additional Time for Imaging (NATIve) using 2D EPI imaging in 3 orthogonal planes

2023

Other Outputs

Deep-learning-enabled differentiation between intraprostatic gold fiducial markers and calcification in quantitative susceptibility mapping

Stewart, Ashley Wilton, Goodwin, Jonathan, Richardson, Matthew, Robinson, Simon Daniel, O’Brien, Kieran, Jin, Jin, Barth, Markus and Bollmann, Steffen (2023). Deep-learning-enabled differentiation between intraprostatic gold fiducial markers and calcification in quantitative susceptibility mapping.

Deep-learning-enabled differentiation between intraprostatic gold fiducial markers and calcification in quantitative susceptibility mapping

2023

Journal Article

Improved dynamic distortion correction for fMRI using single‐echo EPI and a readout‐reversed first image (REFILL)

Robinson, Simon Daniel, Bachrata, Beata, Eckstein, Korbinian, Bollmann, Saskia, Bollmann, Steffen, Dymerska, Barbara, Hodono, Shota, Cloos, Martijn, Tourell, Monique, Jin, Jin, O'Brien, Kieran, Reutens, David C., Trattnig, Siegfried, Enzinger, Christian and Barth, Markus (2023). Improved dynamic distortion correction for fMRI using single‐echo EPI and a readout‐reversed first image (REFILL). Human Brain Mapping, 44 (15), 5095-5112. doi: 10.1002/hbm.26440

Improved dynamic distortion correction for fMRI using single‐echo EPI and a readout‐reversed first image (REFILL)

2023

Journal Article

Variability of visual field maps in human early extrastriate cortex challenges the canonical model of organization of V2 and V3

Lenita Ribeiro, Fernanda, York, Ashley, Zavitz, Elizabeth, Bollmann, Steffen, Rosa, Marcello G.P. and Puckett, Alexander (2023). Variability of visual field maps in human early extrastriate cortex challenges the canonical model of organization of V2 and V3. eLife e86439. doi: 10.7554/eLife.86439

Variability of visual field maps in human early extrastriate cortex challenges the canonical model of organization of V2 and V3

2023

Journal Article

Variability of visual field maps in human early extrastriate cortex challenges the canonical model of organization of V2 and V3

Ribeiro, Fernanda Lenita, York, Ashley, Zavitz, Elizabeth, Bollmann, Steffen, Rosa, Marcello GP and Puckett, Alexander (2023). Variability of visual field maps in human early extrastriate cortex challenges the canonical model of organization of V2 and V3. eLife, 12, 12. doi: 10.7554/elife.86439

Variability of visual field maps in human early extrastriate cortex challenges the canonical model of organization of V2 and V3

2023

Conference Publication

Investigating the computational reproducibility of Neurodesk

Dao, Thuy, Renton, Angela, Narayanan, Aswin, Barth, Markus and Bollmann, Steffen (2023). Investigating the computational reproducibility of Neurodesk. International Society for Magnetic Resonance in Medicine, Toronto, ON, Canada, 3-8 June 2023.

Investigating the computational reproducibility of Neurodesk

2023

Conference Publication

Proceedings of the OHBM Brainhack 2021

Nikolaidis, Aki, Manchini, Matteo, Auer, Tibor, L. Bottenhorn, Katherine, Alonso-Ortiz, Eva, Gonzalez-Escamilla, Gabriel, Valk, Sofie, Glatard, Tristan, Selim Atay, Melvin, M.M. Bayer, Johanna, Bijsterbosch, Janine, Algermissen, Johannes, Beck, Natacha, Bermudez, Patrick, Poyraz Bilgin, Isil, Bollmann, Steffen, Bradley, Claire, E.J. Campbell, Megan, Caron, Bryan, Civier, Oren, Pedro Coelho, Luis, El Damaty, Shady, Das, Samir, Dugré, Mathieu, Earl, Eric, Evas, Stefanie, Lopes Fischer, Nastassja, Fu Yap, De, G. Garner, Kelly ... P. Zwiers, Marcel (2023). Proceedings of the OHBM Brainhack 2021. OHBM Brainhack 2021, Online, 16-18 June 2021. Organization for Human Brain Mapping. doi: 10.52294/258801b4-a9a9-4d30-a468-c43646391211

Proceedings of the OHBM Brainhack 2021

2023

Journal Article

NeXtQSM—A complete deep learning pipeline for data-consistent Quantitative Susceptibility Mapping trained with hybrid data

Cognolato, Francesco, O’Brien, Kieran, Jin, Jin, Robinson, Simon, Laun, Frederik B., Barth, Markus and Bollmann, Steffen (2023). NeXtQSM—A complete deep learning pipeline for data-consistent Quantitative Susceptibility Mapping trained with hybrid data. Medical Image Analysis, 84 102700, 102700. doi: 10.1016/j.media.2022.102700

NeXtQSM—A complete deep learning pipeline for data-consistent Quantitative Susceptibility Mapping trained with hybrid data

2023

Conference Publication

Open-Source Hypothalamic-ForniX (OSHy-X) Atlases and Segmentation Tool for 3T and 7T

Chang, Jeryn, Steyn, Frederik, Ngo, Shyuan, Henderson, Robert, Guo, Christine, Bollmann, Steffen, Fripp, Jurgen, Barth, Markus and Shaw, Thomas (2023). Open-Source Hypothalamic-ForniX (OSHy-X) Atlases and Segmentation Tool for 3T and 7T. Joint Annual Meeting ISMRM-ESMRMB & ISMRT 31st Annual Meeting, London, United Kingdom, 7-12 May 2022. Concord, CA United States: International Society for Magnetic Resonance in Medicine. doi: 10.58530/2022/3808

Open-Source Hypothalamic-ForniX (OSHy-X) Atlases and Segmentation Tool for 3T and 7T

2023

Journal Article

Deep learning based modelling of three-dimensional magnetic field

Nguyen, Van Tai, Bollmann, Steffen, Bermingham, Michael, Nguyen, Ha Xuan and Dargusch, Matthew S. (2023). Deep learning based modelling of three-dimensional magnetic field. Progress In Electromagnetics Research B, 100, 173-189. doi: 10.2528/pierb23051402

Deep learning based modelling of three-dimensional magnetic field

2023

Conference Publication

Evaluation of the REFILL dynamic distortion correction method for fMRI

Robinson, Simon, Bachrata, Beata, Eckstein, Korbinian, Dymerska, Barbara, Bollmann, Saskia, Bollmann, Steffen, Hodono, Shota, Cloos, Martijn, Tourell, Monique, Jin, Jin, O'Brien, Kieran, Reutens, David, Trattnig, Siegfried, Enzinger, Christian and Barth, Markus (2023). Evaluation of the REFILL dynamic distortion correction method for fMRI. Joint Annual Meeting ISMRM-ESMRMB ISMRT 31st Annual Meeting, London, United Kingdom, 7 - 12 May 2022. Berkeley, CA, United States: International Society for Magnetic Resonance in Medicine. doi: 10.58530/2022/2807

Evaluation of the REFILL dynamic distortion correction method for fMRI

2023

Conference Publication

Isotropic QSM in seconds using super-resolution 2D EPI imaging in 3 orthogonal planes

Bachrata, Beata, Bollmann, Steffen, Grabner, Günther, Trattnig, Siegfried and Robinson, Simon (2023). Isotropic QSM in seconds using super-resolution 2D EPI imaging in 3 orthogonal planes. Joint Annual Meeting ISMRM-ESMRMB & ISMRT 31st Annual Meeting, London, United Kingdom, 7-12 May 2022. Concord, CA United States: International Society for Magnetic Resonance in Medicine. doi: 10.58530/2022/2362

Isotropic QSM in seconds using super-resolution 2D EPI imaging in 3 orthogonal planes

2022

Journal Article

Spikes with and without concurrent high-frequency oscillations: topographic relationship and neural correlates using EEG-fMRI

Urriola, Javier, Bollmann, Steffen, Tremayne, Fred, Burianová, Hana, Marstaller, Lars and Reutens, David (2022). Spikes with and without concurrent high-frequency oscillations: topographic relationship and neural correlates using EEG-fMRI. Epilepsy Research, 188 107039, 1-10. doi: 10.1016/j.eplepsyres.2022.107039

Spikes with and without concurrent high-frequency oscillations: topographic relationship and neural correlates using EEG-fMRI

2022

Conference Publication

Investigating the computational reproducibility of Neurodesk

Dao, Thuy, Renton, Angela, Narayanan, Aswin, Barth, Markus and Bollmann, Steffen (2022). Investigating the computational reproducibility of Neurodesk. International Society for Magnetic Resonance in Medicine ANZ Chapter, Sydney, NSW, Australia, 12-13 November 2022.

Investigating the computational reproducibility of Neurodesk

2022

Journal Article

Efficient modelling of permanent magnet field distribution for deep learning applications

Nguyen, Van Tai, Bollmann, Steffen, Bermingham, Michael and Dargusch, Matthew S. (2022). Efficient modelling of permanent magnet field distribution for deep learning applications. Journal of Magnetism and Magnetic Materials, 559 169521, 1-12. doi: 10.1016/j.jmmm.2022.169521

Efficient modelling of permanent magnet field distribution for deep learning applications

2022

Journal Article

Open-Source Hypothalamic-ForniX (OSHy-X) Atlases and Segmentation Tool for 3T and 7T

Chang, Jeryn, Steyn, Frederik, Ngo, Shyuan, Henderson, Robert, Guo, Christine, Bollmann, Steffen, Fripp, Jurgen, Barth, Markus and Shaw, Thomas (2022). Open-Source Hypothalamic-ForniX (OSHy-X) Atlases and Segmentation Tool for 3T and 7T. Journal of Open Source Software, 7 (76), 4368. doi: 10.21105/joss.04368

Open-Source Hypothalamic-ForniX (OSHy-X) Atlases and Segmentation Tool for 3T and 7T

2022

Conference Publication

Quantitative susceptibility mapping as an alternative to CT for localizing gold intraprostatic fiducial markers

Stewart, Ashley Wilton, Goodwin, Jonathan, Robinson, Simon Daniel, O’Brien, Kieran, Jin, Jin, Barth, Markus and Bollmann, Stefan (2022). Quantitative susceptibility mapping as an alternative to CT for localizing gold intraprostatic fiducial markers. ISMRM 2022, London, United Kingdom, 7-12 May 2022. Concord, CA USA: International Society for Magnetic Resonance in Medicine.

Quantitative susceptibility mapping as an alternative to CT for localizing gold intraprostatic fiducial markers