
Overview
Background
John Upham is a clinical scientist and physician with longstanding research interests in the immunological basis of asthma and chronic lung disease, the role of dendritic cells in allergy and virus infections of the lung, and the development of novel approaches to severe asthma treatment.
John is highly influential in his field, with > 195 publications, > 5,400 citations and an H index of 46. Since 2009, he has 112 publications (1st/senior author on 45%) with a Field-Weighted Citation Impact of 2.03. Moreover, 21.5% of publications are in the top 10% of most-cited publications worldwide (field-weighted). His publications have been cited in >20 different subject areas, demonstrating translation to fields other than Medicine. His research has international reach with citations in 80 countries (Scopus Dec 2018).
In the last 10 years, he has secured over $24 million in research funding. John has been awarded 8 NHMRC Project grants (4 as CIA in the last 5 years), 2 NHMRC CRE (“Closing the gap in Indigenous Lung Health” and “Severe Asthma”), and 1 NHMRC Development Grant. He currently holds NHMRC grants of $7.5 million, including $2.96 million as CIA. John was regularly an invited (9x), plenary (3x) and Chair (9x) at national and international conferences in the last 5 years. In recognition of his international standing and influence in the field, he was elected Fellow of the American Academy of Allergy, Asthma & Immunology (2004) and the Thoracic Society of Australia and New Zealand (2015).
Availability
- Honorary Professor John Upham is:
- Available for supervision
- Media expert
Fields of research
Qualifications
- Doctor of Philosophy, University of Western Australia
Research interests
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Immune function and susceptibility to virus infections in asthma and COPD
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Plasmacytoid dendritic cells
Type I interferon production Immune regulation
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Severe asthma: towards evidence-based assessment and management
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Innate immunity and bacterial infections of the lungs
Bronchiectasis and chronic suppurative lung disease in children Lung health in Indigenous children
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Allergy and immune tolerance
Research impacts
John is currently the President (2021-22) of the Thoracic Society of Australia and Zealand and is a key member of the NHMRC funded Centre of Research Excellence (CRE) in Asthma Treatable Traits. He has played a leadership role in organising and co-chairing three recent national symposia on severe asthma to facilitate research collaboration, build research and clinical capacity, and improve models of care for severe asthma. He has been a member of multiple advisory boards to pharmaceutical companies, both international and national (AstraZeneca, GSK, Novartis, Nycomed, Boehringer-Ingelheim, Mundipharma, Menarini), and has provided advice to the Pharmaceutical Benefits Advisory Committee. His research has provided new treatment options for severe asthma, and guided the appropriate length of antibiotic treatment for Indigenous children with pneumonia, protracted bacterial bronchitis and bronchiectasis. John's research will inform best use of influenza vaccination in COPD, and guide the use of conjugate vaccines to improve immunity to Haemophilus in Indigenous children. He contributed to Clinical Practice Guidelines for the use of omalizumab and mepolizumab in Australia and he was part of the working group that prepared a web-based Severe Asthma Toolkit for the Severe Asthma CRE.
Works
Search Professor John Upham’s works on UQ eSpace
2011
Journal Article
Remission of asthma: the next therapeutic frontier?
Upham, John W. and James, Alan L. (2011). Remission of asthma: the next therapeutic frontier?. Pharmacology & Therapeutics, 130 (1), 38-45. doi: 10.1016/j.pharmthera.2011.01.002
2011
Journal Article
The dominant 55kDa allergen of the subtropical Bahia grass (Paspalum notatum) pollen is a group 13 pollen allergen, Pas n 13
Davies, Janet M., Voskamp, Astrid, Dang, Thanh D., Pettit, Benjamin, Loo, Dorothy, Petersen, Arnd, Hill, Michelle M., Upham, John W., Rolland, Jennifer M. and O'Hehir, Robyn E. (2011). The dominant 55kDa allergen of the subtropical Bahia grass (Paspalum notatum) pollen is a group 13 pollen allergen, Pas n 13. Molecular Immunology, 48 (6-7), 931-940. doi: 10.1016/j.molimm.2010.12.013
2011
Journal Article
Reduced soluble receptor for advanced glycation end-products in COPD
Smith, D. J., Yerkovich, S. T., Towers, M. A., Carroll, M. L., Thomas, R. and Upham, J. W. (2011). Reduced soluble receptor for advanced glycation end-products in COPD. European Respiratory Journal, 37 (3), 516-522. doi: 10.1183/09031936.00029310
2011
Journal Article
Functional immunoglobulin E cross-reactivity between Pas n 1 of Bahia grass pollen and other group 1 grass pollen allergens
Davies, J.M., Dang, T.D., Voskamp, A., Drew, A.C., Biondo, M., Phung, M., Upham, J.W., Rolland, J.M. and O'Hehir, R.E. (2011). Functional immunoglobulin E cross-reactivity between Pas n 1 of Bahia grass pollen and other group 1 grass pollen allergens. Clinical and Experimental Allergy, 41 (2), 281-291. doi: 10.1111/j.1365-2222.2010.03670.x
2011
Conference Publication
Impaired immune response to influenza vaccination in chronic obstructive pulmonary disease
Nath, Karthik, Burel, Julie, Pritchard, Antonia L., Towers, Michelle, Looke, David, Davies, Janet E. and Upham, John W. (2011). Impaired immune response to influenza vaccination in chronic obstructive pulmonary disease. 22nd Australasian Society of Clinical Immunology and Allergy (ASCIA) Annual Scientific Meeting, Darling Harbour, NSW, Australia, 7-9 September 2011. Richmond, Vic., Australia: Wiley-Blackwell Publishing Asia. doi: 10.1111/j.1445-5994.2011.02570.x
2011
Book Chapter
Interactions between allergens and dendritic cells: Pattern recognition receptors and their function in the pathogenesis of allergic respiratory diseases
Upham, John W. and Yerkovich, Stephanie T. (2011). Interactions between allergens and dendritic cells: Pattern recognition receptors and their function in the pathogenesis of allergic respiratory diseases. Allergens and respiratory pollutants : the role of innate immunity. (pp. 245-275) edited by Marc A. Williams. Oxford, England: Biohealthcare Publishing. doi: 10.1016/B978-1-907568-54-1.50012-2
2011
Conference Publication
Bronchososcopy with lavage contributes to the clinical management of children with non-CF bronchiectasis
Pizzutto, S. J., Grimwood, Keith, Bauert, P., Schultz, K. I., Yerkovich, Stephanie, Upham, John and Chang, Anne B. (2011). Bronchososcopy with lavage contributes to the clinical management of children with non-CF bronchiectasis. Thoracic Society of Australia and New Zealand Annual Scientific Meeting, Perth, Australia, 2-6 April 2011.
2011
Conference Publication
Budesonide and formoterol reduce early innate anti-viral immune responses in vitro
Davies, Janet M., Carroll, Melanie L., Li, Hongzhuo, Poh, Alisa M., Kirkegard, Darren, Towers, Michelle and Upham, John W. (2011). Budesonide and formoterol reduce early innate anti-viral immune responses in vitro. Australasian Society of Clinical Immunology and Allergy Annual Scientific Meeting (22nd, ASCIA, 2011), Darling Harbour, NSW, Australia, 7-9 September 2011.
2011
Conference Publication
Type I interferons and plasmacytoid dendritic cells selectively constrain T(h)2 cytokine responses to rhinoviruses
Pritchard, Antonia L., Carroll, Melanie L., Burel, Julie and Upham, John W. (2011). Type I interferons and plasmacytoid dendritic cells selectively constrain T(h)2 cytokine responses to rhinoviruses. 22nd Australasian Society of Clinical Immunology and Allergy (ASCIA) Annual Scientific Meeting, Darling Harbour, NSW, Australia, 7-9 September 2011. Richmond, Vic., Australia: Wiley-Blackwell Publishing Asia. doi: 10.1111/j.1445-5994.2011.02570.x
2011
Conference Publication
Effects Of Budesonide & Formoterol On Innate Anti-Viral Immune Responses In Vitro
Upham, J. W., Carroll, M. L., Li, H. and Davies, J. M. (2011). Effects Of Budesonide & Formoterol On Innate Anti-Viral Immune Responses In Vitro. NEW YORK: AMER THORACIC SOC.
2011
Conference Publication
B cell responses to areoalllergens in patient with allergic disease
Burel, Julie, Li, Hongzhuo, Wong, Kelly, Towers, Michelle, Upham, John and Davies, Janet (2011). B cell responses to areoalllergens in patient with allergic disease. Australasian Society of Clinical Immunology and Allergy Annual Scientific Meeting (22nd, ASCIA, 2011), Darling Harbour, NSW, Australia, 7-9 September 2011. doi: 10.1111/j.1445-5994.2011.02570.x
2010
Journal Article
Adaptive immunity to rhinoviruses: Sex and age matter
Carroll, Melanie L., Yerkovich, Stephanie T., Pritchard, Antonia L., Davies, Janet M. and Upham, John W. (2010). Adaptive immunity to rhinoviruses: Sex and age matter. Respiratory Research, 11 (1) 184, 184-1-184-7. doi: 10.1186/1465-9921-11-184
2010
Journal Article
Are rhinoviral proteinases responsible for mixed T(H)1 and T(H)2 immunity in chronic obstructive pulmonary disease?
Upham, JW and Pritchard, A (2010). Are rhinoviral proteinases responsible for mixed T(H)1 and T(H)2 immunity in chronic obstructive pulmonary disease?. Journal of Allergy and Clinical Immunology, 126 (6), 1318-1318. doi: 10.1016/j.jaci.2010.07.009
2010
Journal Article
Epithelial-dendritic cell interactions in allergic disorders
Strickland, DH, Upham, JW and Holt, PG (2010). Epithelial-dendritic cell interactions in allergic disorders. Current Opinion in Immunology, 22 (6), 789-794. doi: 10.1016/j.coi.2010.10.019
2010
Journal Article
Monocytes From Children With Clinically Stable Cystic Fibrosis Show Enhanced Expression of Toll-Like Receptor 4
Sturges, Nina C., Wikström, Matthew E., Winfield, Kaye R., Gard, Samantha E., Brennan, Siobhain, Sly, Peter D. and Upham, John W. (2010). Monocytes From Children With Clinically Stable Cystic Fibrosis Show Enhanced Expression of Toll-Like Receptor 4. Pediatric Pulmonology, 45 (9), 883-889. doi: 10.1002/ppul.21230
2010
Journal Article
Year-in-review 2009: Asthma, COPD and airway biology
Reddel, Helen K., Upham, John W., Salvi, Sundeep S. and Yang, Ian A. (2010). Year-in-review 2009: Asthma, COPD and airway biology. Respirology, 15 (2), 365-376. doi: 10.1111/j.1440-1843.2009.01702.x
2010
Journal Article
Inhaled non-steroid anti-inflammatories for children and adults with bronchiectasis
Pizzutto, Susan J., Upham, John W., Yerkovich, Stephanie T. and Chang, Anne B. (2010). Inhaled non-steroid anti-inflammatories for children and adults with bronchiectasis. Cochrane Database of Systematic Reviews, 4 (4) CD007525, CD007525-1-CD007525-18. doi: 10.1002/14651858.CD007525.pub2
2010
Journal Article
Toll-like receptor 7 function is reduced in adolescents with asthma
Roponen, M., Yerkovich, S. T., Hollams, E., Sly, P. D., Holt, P. G. and Upham, J. W. (2010). Toll-like receptor 7 function is reduced in adolescents with asthma. European Respiratory Journal, 35 (1), 64-71. doi: 10.1183/09031936.00172008
2010
Conference Publication
Grass pollen allergy in Queensland: How important are the subtropical grass pollens for triggering allergic rhinitis and asthma?
Davies, Janet, Li, HonZhuo, Green, Melissa, Towers, Michelle and Upham, John (2010). Grass pollen allergy in Queensland: How important are the subtropical grass pollens for triggering allergic rhinitis and asthma?. 21st Meeting of the Australian Society for Clinical Immunology and Allergy, Gold Coast , QLD, Australia, 1-3 September 2010. Richmond, Vic., Australia: Wiley-Blackwell Publishing Asia. doi: 10.1111/j.1445-5994.2010.02324.x
2010
Conference Publication
Reduced Baseline IgG1 Antibodies To Rhinoviruses Is Associated With Increased Risk Of Acute Exacerbations Of Chronic Obstructive Pulmonary Disease
Yerkovich, S. T., Carroll, M. L., Towers, M. A., Smith, D. J., Hales, B. J., Thomas, W. R. and Upham, J. W. (2010). Reduced Baseline IgG1 Antibodies To Rhinoviruses Is Associated With Increased Risk Of Acute Exacerbations Of Chronic Obstructive Pulmonary Disease. NEW YORK: AMER THORACIC SOC.
Funding
Past funding
Supervision
Availability
- Honorary Professor John Upham is:
- Available for supervision
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Available projects
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Immune dysregulation in asthma and host defence against respiratory viruses
Our program of translational research is focussed on the study of immune function and dysfunction in asthma, and host defence against respiratory viruses, especially human rhinoviruses. We are interested in the mechanisms leading to excessive airway inflammation in asthma, and why people with asthma are unusually susceptible to asthma attacks during respiratory viral infections. Our aim is to discover new therapeutic targets in severe asthma.
Research Projects
- The function of key immune cells such as antigen presenting cells and NK cells
- The role of polarizing cytokines such as IL-33, IL-25 and TSLP in altering host defence against viruses.
- How macrolide antibiotics alter immune function
Supervision history
Current supervision
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Doctor Philosophy
Transmission dynamics of multi-drug resistant tuberculosis amongst immune suppressed patients exposed to an infectious case
Associate Advisor
Other advisors: Professor Antje Blumenthal, Professor Rachel Thomson
Completed supervision
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2023
Doctor Philosophy
Advancing management of pulmonary thromboembolic disease: from acute pulmonary embolism to pulmonary hypertension
Principal Advisor
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2023
Doctor Philosophy
Using proteomics to understand and prevent asthma exacerbations with macrolide antibiotics
Principal Advisor
Other advisors: Professor Ian Yang
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2021
Doctor Philosophy
Role of Regulatory T cells in modulating antiviral immune responses to rhinovirus: relevance to asthma
Principal Advisor
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2019
Doctor Philosophy
The impact of asthma, toll-like receptors 7 and 8, genetic and clinical determinants on antiviral immune response
Principal Advisor
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2020
Doctor Philosophy
The influence of maternal diet on microbiome assembly and severity of viral bronchiolitis in the offspring
Associate Advisor
Other advisors: Associate Professor Paul Dennis
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2019
Doctor Philosophy
The role of necroptosis in the development of severe bronchiolitis and subsequent asthma
Associate Advisor
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2018
Doctor Philosophy
The role of the interleukin-6 pathway in asthma
Associate Advisor
Other advisors: Professor Nick Martin
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2017
Doctor Philosophy
A critical contribution of the airway epithelium to the pathogenesis of viral bronchiolitis and asthma
Associate Advisor
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2016
Doctor Philosophy
The role of interferon regulatory factor 3 and 7 in virus-induced bronchiolitis and the onset of asthma.
Associate Advisor
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2016
Doctor Philosophy
Understanding the cellular and molecular processes that link RAGE gene-deletion with the development of pneumovirus-induced bronchiolitis and paucigranulocytic asthma
Associate Advisor
Other advisors: Professor Peter Sly
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2015
Doctor Philosophy
The plasmacytoid dendritic cell: a cell at the cross-roads in asthma
Associate Advisor
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2015
Doctor Philosophy
Chronic wet cough in children and further exploration of protracted bacterial bronchitis
Associate Advisor
Media
Enquiries
Contact Honorary Professor John Upham directly for media enquiries about:
- Allergies
- Asthma
- Chronic obstructive pulmonary disease
- Dendritic cells
- Immunity
- Lung infections
- Lungs - virus infections
- Virus infections of the lung
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