
Overview
Background
John Upham is a clinical scientist and physician with longstanding research interests in the immunological basis of asthma and chronic lung disease, the role of dendritic cells in allergy and virus infections of the lung, and the development of novel approaches to severe asthma treatment.
John is highly influential in his field, with > 195 publications, > 5,400 citations and an H index of 46. Since 2009, he has 112 publications (1st/senior author on 45%) with a Field-Weighted Citation Impact of 2.03. Moreover, 21.5% of publications are in the top 10% of most-cited publications worldwide (field-weighted). His publications have been cited in >20 different subject areas, demonstrating translation to fields other than Medicine. His research has international reach with citations in 80 countries (Scopus Dec 2018).
In the last 10 years, he has secured over $24 million in research funding. John has been awarded 8 NHMRC Project grants (4 as CIA in the last 5 years), 2 NHMRC CRE (“Closing the gap in Indigenous Lung Health” and “Severe Asthma”), and 1 NHMRC Development Grant. He currently holds NHMRC grants of $7.5 million, including $2.96 million as CIA. John was regularly an invited (9x), plenary (3x) and Chair (9x) at national and international conferences in the last 5 years. In recognition of his international standing and influence in the field, he was elected Fellow of the American Academy of Allergy, Asthma & Immunology (2004) and the Thoracic Society of Australia and New Zealand (2015).
Availability
- Honorary Professor John Upham is:
- Available for supervision
- Media expert
Fields of research
Qualifications
- Doctor of Philosophy, University of Western Australia
Research interests
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Immune function and susceptibility to virus infections in asthma and COPD
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Plasmacytoid dendritic cells
Type I interferon production Immune regulation
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Severe asthma: towards evidence-based assessment and management
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Innate immunity and bacterial infections of the lungs
Bronchiectasis and chronic suppurative lung disease in children Lung health in Indigenous children
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Allergy and immune tolerance
Research impacts
John is currently the President (2021-22) of the Thoracic Society of Australia and Zealand and is a key member of the NHMRC funded Centre of Research Excellence (CRE) in Asthma Treatable Traits. He has played a leadership role in organising and co-chairing three recent national symposia on severe asthma to facilitate research collaboration, build research and clinical capacity, and improve models of care for severe asthma. He has been a member of multiple advisory boards to pharmaceutical companies, both international and national (AstraZeneca, GSK, Novartis, Nycomed, Boehringer-Ingelheim, Mundipharma, Menarini), and has provided advice to the Pharmaceutical Benefits Advisory Committee. His research has provided new treatment options for severe asthma, and guided the appropriate length of antibiotic treatment for Indigenous children with pneumonia, protracted bacterial bronchitis and bronchiectasis. John's research will inform best use of influenza vaccination in COPD, and guide the use of conjugate vaccines to improve immunity to Haemophilus in Indigenous children. He contributed to Clinical Practice Guidelines for the use of omalizumab and mepolizumab in Australia and he was part of the working group that prepared a web-based Severe Asthma Toolkit for the Severe Asthma CRE.
Works
Search Professor John Upham’s works on UQ eSpace
2002
Journal Article
Dendritic cell maturation and IL-12 synthesis induced by the synthetic immune-response modifier S-28463
Fogel, Mirjana, Long, Julie A., Thompson, Philip J. and Upham, John W. (2002). Dendritic cell maturation and IL-12 synthesis induced by the synthetic immune-response modifier S-28463. Journal of Leukocyte Biology, 72 (5), 932-938.
2002
Journal Article
Basic Science Funding in Australia: Lessons from the EU
Stumbles, Philip A., Upham, John W. and Nelson, Delia J. (2002). Basic Science Funding in Australia: Lessons from the EU. Nature Immunology, 3 (10), 885-885. doi: 10.1038/ni1002-885
2002
Journal Article
Distinct Phenotypic Adhesion Molecule Expression on Human Cord Blood Progenitors During Early Eosinophilic Commitment: Upregulation of β7 Integrins
Lundahl, J., Sehmi, R., Moshfegh, A., Hayes, L., Howie, K., Upham, J. and Denburg, J. A. (2002). Distinct Phenotypic Adhesion Molecule Expression on Human Cord Blood Progenitors During Early Eosinophilic Commitment: Upregulation of β7 Integrins. Scandinavian Journal of Immunology, 56 (2), 161-167. doi: 10.1046/j.1365-3083.2002.01117.x
2002
Conference Publication
The synthetic immune response modifier induces dendritic cells to mature and synthesize cytokines via a pathway distinct from lipopolysaccharide
Fogel, MF, Long, JAL, Thompson, PJT and Upham, JWU (2002). The synthetic immune response modifier induces dendritic cells to mature and synthesize cytokines via a pathway distinct from lipopolysaccharide. 21st Congress of the European-Academy-of-Allergology-and-Clinical-Immunology, Naples Italy, Jun 01-05, 2002. COPENHAGEN: BLACKWELL MUNKSGAARD.
2002
Journal Article
Rapid response of circulating myeloid dendritic cells to inhaled allergen in asthmatic subjects
Upham, J. W., Wood, L. J., Denburg, J. A. and Byrne, P. M. (2002). Rapid response of circulating myeloid dendritic cells to inhaled allergen in asthmatic subjects. Clinical And Experimental Allergy, 32 (6), 818-823. doi: 10.1046/j.1365-2222.2002.01375.x
2002
Journal Article
Retinoic Acid Modulates IL-5 Receptor Expression and Selectively Inhibits Eosinophil-Basophil Differentiation of Hemopoietic Progenitor Cells
Upham, John W., Sehmi, Roma, Hayes, Lisa M., Howie, Karen, Lundahl, Joachim and Denburg, Judah A. (2002). Retinoic Acid Modulates IL-5 Receptor Expression and Selectively Inhibits Eosinophil-Basophil Differentiation of Hemopoietic Progenitor Cells. Journal of Allergy and Clinical Immunology, 109 (2), 307-313. doi: 10.1067/mai.2002.121527
2002
Conference Publication
The synthetic immune response modifier R-848 induces dendritic cells to mature and synthesize a diverse range of cytokines via a pathway distinct from lipopolysaccharide
Fogel, M., Long, J. A., Thompson, P. J. and Upham, J. W. (2002). The synthetic immune response modifier R-848 induces dendritic cells to mature and synthesize a diverse range of cytokines via a pathway distinct from lipopolysaccharide. Annual Meeting of the American Academy of Allergy, Asthma and Immunology, New York City, NY United States, 1-6 March 2002. Philadelphia, PA, United States: Mosby. doi: 10.1016/S0091-6749(02)81297-0
2001
Journal Article
Rapid dendritic cell recruitment to the bronchial mucosa of patients with atopic asthma in response to local allergen challenge
Jahnsen, F. L., Moloney, E. D., Hogan, T., Upham, J. W., Burke, C. M. and Holt, P. G. (2001). Rapid dendritic cell recruitment to the bronchial mucosa of patients with atopic asthma in response to local allergen challenge. Thorax, 56 (11), 823-826. doi: 10.1136/thorax.56.11.823
2001
Conference Publication
Regulation of IL-5 receptor on eosinophil progenitors in allergic inflammation: role of retinoic acid
Denburg, Judah A., Sehmi, Roma and Upham, John (2001). Regulation of IL-5 receptor on eosinophil progenitors in allergic inflammation: role of retinoic acid. 23rd Symposium of the Collegium Internationale Allergologicum (CIA 2000), Hakone, Japan, 18-23 May 2000. Basel, Switzerland: Karger. doi: 10.1159/000053724
2000
Journal Article
Simplified quantitation of myeloid dendritic cells in peripheral blood using flow cytometry
Upham, J. W., Lundahl, J., Liang, H., Denburg, J. A., O'Byrne, P. M. and Snider, D. P. (2000). Simplified quantitation of myeloid dendritic cells in peripheral blood using flow cytometry. Cytometry, 40 (1), 50-59. doi: 10.1002/(SICI)1097-0320(20000501)40:13.0.CO;2-P
2000
Conference Publication
Modulation of eosinophil progenitor growth and IL5R alpha expression on CD34+cells by retinoic acid
Lacosta, S., Sehmi, R., Upham, J., Hayes, L., Tavernier, J. and Denburg, J. A. (2000). Modulation of eosinophil progenitor growth and IL5R alpha expression on CD34+cells by retinoic acid. Annual Meeting of the American Academy of Allergy, Asthma and Immunology, San Diego California USA, 3-8 March 2000. Philadelphia, PA, United States: Mosby. doi: 10.1016/S0091-6749(00)91195-3
1999
Journal Article
Circulating dendritic cells and asthma: Rapid changes following inhaled allergen
Upham, John, Denburg, Judah and O'Byrne, Paul (1999). Circulating dendritic cells and asthma: Rapid changes following inhaled allergen. Respirology, 4 (SUPPL. 1)
1999
Journal Article
Reduced expression of gm-csf receptor on cord blood progenitor cells from neonates at risk for atopy
Upham, John, Hayes, Lisa, Lundahl, Joachim, Sehmi, Roma and Denburg, Judah (1999). Reduced expression of gm-csf receptor on cord blood progenitor cells from neonates at risk for atopy. Respirology, 4 (SUPPL. 1)
1999
Journal Article
Retinoic acid selectively inhibits il-5 receptor expression during progenitor cell differentiation
Upham, John, Hayes, Lisa, Sehmi, Roma and Denburg, Judah (1999). Retinoic acid selectively inhibits il-5 receptor expression during progenitor cell differentiation. Respirology, 4 (SUPPL. 1)
1999
Journal Article
Reduced expression of hemopoietic cytokine receptors on cord blood progenitor cells in neonates at risk for atopy
Upham, John W., Hayes, Lisa M., Lundahl, Joachim, Sehmi, Roma and Denburg, Judah A. (1999). Reduced expression of hemopoietic cytokine receptors on cord blood progenitor cells in neonates at risk for atopy. Journal of Allergy and Clinical Immunology, 104 (2), 370-375. doi: 10.1016/S0091-6749(99)70381-7
1999
Conference Publication
Regulation of IL-5 and IL-5 receptor expression in the bone marrow of allergic asthmatics
Denburg, Judah A., Sehmi, Roma, Upham, John, Wood, Lorna, Gauvreau, Gail and O'Byrne, Paul (1999). Regulation of IL-5 and IL-5 receptor expression in the bone marrow of allergic asthmatics. 22nd Symposium of the Collegium Internationale Allergologicum, Corfu, Greece, 12-16 September 1998. Basel, Switzerland: Karger. doi: 10.1159/000024040
1999
Conference Publication
Circulating T-cells and granulocytes from asthmatics exhibit impaired capacity for intracellular IL-10 production
Narita, S, Upham, J, Lundahl, J, Watson, R, Croitru, K and O'Byrne, PM (1999). Circulating T-cells and granulocytes from asthmatics exhibit impaired capacity for intracellular IL-10 production. ST LOUIS: MOSBY-YEAR BOOK INC.
1999
Conference Publication
Circulating dendritic cells and asthma: Rapid response to inhaled allergen
Upham, J. W., Denburg, J. A. and O'Byrne, P. M. (1999). Circulating dendritic cells and asthma: Rapid response to inhaled allergen. -, -, -. New York, NY, United States: American Thoracic Society.
1999
Conference Publication
Intracellular cytokines in T-cells from patients with allergic asthma and the effects of inhaled corticosteroids
Narita, S., Upham, J., Lundahl, J., Watson, R., Croitru, K. and O'Byrne, P. M. (1999). Intracellular cytokines in T-cells from patients with allergic asthma and the effects of inhaled corticosteroids. -, -, -. New York, NY, United States: American Thoracic Society.
1998
Journal Article
Inhibition of T cell proliferation by human alveolar macrophages - Authors' reply
Holt, P. G. and Upham, J. W. (1998). Inhibition of T cell proliferation by human alveolar macrophages - Authors' reply. Thorax, 53 (5), 437-437.
Funding
Past funding
Supervision
Availability
- Honorary Professor John Upham is:
- Available for supervision
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Available projects
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Immune dysregulation in asthma and host defence against respiratory viruses
Our program of translational research is focussed on the study of immune function and dysfunction in asthma, and host defence against respiratory viruses, especially human rhinoviruses. We are interested in the mechanisms leading to excessive airway inflammation in asthma, and why people with asthma are unusually susceptible to asthma attacks during respiratory viral infections. Our aim is to discover new therapeutic targets in severe asthma.
Research Projects
- The function of key immune cells such as antigen presenting cells and NK cells
- The role of polarizing cytokines such as IL-33, IL-25 and TSLP in altering host defence against viruses.
- How macrolide antibiotics alter immune function
Supervision history
Current supervision
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Doctor Philosophy
Transmission dynamics of multi-drug resistant tuberculosis amongst immune suppressed patients exposed to an infectious case
Associate Advisor
Other advisors: Professor Antje Blumenthal, Professor Rachel Thomson
Completed supervision
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2023
Doctor Philosophy
Advancing management of pulmonary thromboembolic disease: from acute pulmonary embolism to pulmonary hypertension
Principal Advisor
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2023
Doctor Philosophy
Using proteomics to understand and prevent asthma exacerbations with macrolide antibiotics
Principal Advisor
Other advisors: Professor Ian Yang
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2021
Doctor Philosophy
Role of Regulatory T cells in modulating antiviral immune responses to rhinovirus: relevance to asthma
Principal Advisor
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2019
Doctor Philosophy
The impact of asthma, toll-like receptors 7 and 8, genetic and clinical determinants on antiviral immune response
Principal Advisor
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2020
Doctor Philosophy
The influence of maternal diet on microbiome assembly and severity of viral bronchiolitis in the offspring
Associate Advisor
Other advisors: Associate Professor Paul Dennis
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2019
Doctor Philosophy
The role of necroptosis in the development of severe bronchiolitis and subsequent asthma
Associate Advisor
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2018
Doctor Philosophy
The role of the interleukin-6 pathway in asthma
Associate Advisor
Other advisors: Professor Nick Martin
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2017
Doctor Philosophy
A critical contribution of the airway epithelium to the pathogenesis of viral bronchiolitis and asthma
Associate Advisor
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2016
Doctor Philosophy
The role of interferon regulatory factor 3 and 7 in virus-induced bronchiolitis and the onset of asthma.
Associate Advisor
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2016
Doctor Philosophy
Understanding the cellular and molecular processes that link RAGE gene-deletion with the development of pneumovirus-induced bronchiolitis and paucigranulocytic asthma
Associate Advisor
Other advisors: Professor Peter Sly
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2015
Doctor Philosophy
Chronic wet cough in children and further exploration of protracted bacterial bronchitis
Associate Advisor
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2015
Doctor Philosophy
The plasmacytoid dendritic cell: a cell at the cross-roads in asthma
Associate Advisor
Media
Enquiries
Contact Honorary Professor John Upham directly for media enquiries about:
- Allergies
- Asthma
- Chronic obstructive pulmonary disease
- Dendritic cells
- Immunity
- Lung infections
- Lungs - virus infections
- Virus infections of the lung
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