
Overview
Background
John Upham is a clinical scientist and physician with longstanding research interests in the immunological basis of asthma and chronic lung disease, the role of dendritic cells in allergy and virus infections of the lung, and the development of novel approaches to severe asthma treatment.
John is highly influential in his field, with > 195 publications, > 5,400 citations and an H index of 46. Since 2009, he has 112 publications (1st/senior author on 45%) with a Field-Weighted Citation Impact of 2.03. Moreover, 21.5% of publications are in the top 10% of most-cited publications worldwide (field-weighted). His publications have been cited in >20 different subject areas, demonstrating translation to fields other than Medicine. His research has international reach with citations in 80 countries (Scopus Dec 2018).
In the last 10 years, he has secured over $24 million in research funding. John has been awarded 8 NHMRC Project grants (4 as CIA in the last 5 years), 2 NHMRC CRE (“Closing the gap in Indigenous Lung Health” and “Severe Asthma”), and 1 NHMRC Development Grant. He currently holds NHMRC grants of $7.5 million, including $2.96 million as CIA. John was regularly an invited (9x), plenary (3x) and Chair (9x) at national and international conferences in the last 5 years. In recognition of his international standing and influence in the field, he was elected Fellow of the American Academy of Allergy, Asthma & Immunology (2004) and the Thoracic Society of Australia and New Zealand (2015).
Availability
- Honorary Professor John Upham is:
- Available for supervision
- Media expert
Fields of research
Qualifications
- Doctor of Philosophy, University of Western Australia
Research interests
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Immune function and susceptibility to virus infections in asthma and COPD
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Plasmacytoid dendritic cells
Type I interferon production Immune regulation
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Severe asthma: towards evidence-based assessment and management
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Innate immunity and bacterial infections of the lungs
Bronchiectasis and chronic suppurative lung disease in children Lung health in Indigenous children
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Allergy and immune tolerance
Research impacts
John is currently the President (2021-22) of the Thoracic Society of Australia and Zealand and is a key member of the NHMRC funded Centre of Research Excellence (CRE) in Asthma Treatable Traits. He has played a leadership role in organising and co-chairing three recent national symposia on severe asthma to facilitate research collaboration, build research and clinical capacity, and improve models of care for severe asthma. He has been a member of multiple advisory boards to pharmaceutical companies, both international and national (AstraZeneca, GSK, Novartis, Nycomed, Boehringer-Ingelheim, Mundipharma, Menarini), and has provided advice to the Pharmaceutical Benefits Advisory Committee. His research has provided new treatment options for severe asthma, and guided the appropriate length of antibiotic treatment for Indigenous children with pneumonia, protracted bacterial bronchitis and bronchiectasis. John's research will inform best use of influenza vaccination in COPD, and guide the use of conjugate vaccines to improve immunity to Haemophilus in Indigenous children. He contributed to Clinical Practice Guidelines for the use of omalizumab and mepolizumab in Australia and he was part of the working group that prepared a web-based Severe Asthma Toolkit for the Severe Asthma CRE.
Works
Search Professor John Upham’s works on UQ eSpace
2005
Journal Article
Contemporaneous maturation of immunologic and respiratory functions during early childhood: Implications for development of asthma prevention strategies
Holt, Patrick G., Upham, John W. and Sly, Peter D. (2005). Contemporaneous maturation of immunologic and respiratory functions during early childhood: Implications for development of asthma prevention strategies. Journal of Allergy and Clinical Immunology, 116 (1), 16-24. doi: 10.1016/j.jaci.2005.04.017
2005
Journal Article
Environment and development of atopy
Upham, John W. and Holt, Patrick G. (2005). Environment and development of atopy. Current Opinion in Allergy and Clinical Immunology, 5 (2), 167-172. doi: 10.1097/01.all.0000162310.79555.ed
2005
Journal Article
The CD14 C-159T polymorphism is not associated with asthma or asthma severity in an Australian adult population
Kedda, M-A., Lose, F., Duffy, D., Bell, E., Thompson, P. J. and Upham, J. (2005). The CD14 C-159T polymorphism is not associated with asthma or asthma severity in an Australian adult population. Thorax, 60 (3), 211-214. doi: 10.1136/thx.2004.028449
2005
Conference Publication
Airway epithelial cells from healthy children inhibit dendritic cell activation and cytokine synthesis
Rate, A., Kicic, A., Stick, S. M. and Upham, J. W. (2005). Airway epithelial cells from healthy children inhibit dendritic cell activation and cytokine synthesis. 35th Annual SCientific Meeting of the Australasian Society for Immunology/14th International HLA and Immunogenetics Workshops, Melbourne, Australia, 29 November -2 December 2005. OXFORD: Wiley.
2005
Journal Article
Maternal reactivity to fetal alloantigens is related to newborn immune responses and subsequent allergic disease
Prescott, S. L., Taylor, A., Roper, J., Wahdan, A., Noakes, P., Thornton, C., Dunstan, J. and Upham, J. W. (2005). Maternal reactivity to fetal alloantigens is related to newborn immune responses and subsequent allergic disease. Clinical and Experimental Allergy, 35 (4), 417-425. doi: 10.1111/j.1365-2222.2005.02171.x
2005
Conference Publication
Influence of APC maturity on the expression of allergen specific T cell memory
Yerkovich, ST, Mus, A and Upham, JW (2005). Influence of APC maturity on the expression of allergen specific T cell memory. 35th Annual SCientific Meeting of the Australasian-Society-for-Immunology/14th International HLA and Immunogenetics Workshops, Melbourne AUSTRALIA, NOV 29-DEC 02, 2005. OXFORD: BLACKWELL PUBLISHING.
2005
Journal Article
Cytosine–phosphate–guanine motifs fail to promote T-helper type 1-polarized responses in human neonatal mononuclear cells
Prescott, S. L., Irwin, S., Taylor, A., Roper, J., Dunstan, J., Upham, J. W., Burgner, D. and Richmond, P. (2005). Cytosine–phosphate–guanine motifs fail to promote T-helper type 1-polarized responses in human neonatal mononuclear cells. Clinical and Experimental Allergy, 35 (3), 358-366. doi: 10.1111/j.1365-2222.2005.02187.x
2005
Conference Publication
Numbers of circulating plasmacytoid and myeloid dendritic cell subsets in infancy are differentially associated with risk for respiratory viral infections and allergic sensitisation
Upham, J. W., Rate, A., Kusel, M., Sly, P. D. and Holt, P. G. (2005). Numbers of circulating plasmacytoid and myeloid dendritic cell subsets in infancy are differentially associated with risk for respiratory viral infections and allergic sensitisation. 35th Annual Scientific Meeting of the Australasian Society for Immunology and 14th International HLA & Immunogenetics Workshop, Melbourne, Australia, 29 November-2 December 2005. OXFORD: BLACKWELL PUBLISHING.
2005
Conference Publication
Toll-like receptor 2 ligands inhibit Th2 responses to mite allergen
Taylor, R. C., Richmond, P. and Upham, J. W. (2005). Toll-like receptor 2 ligands inhibit Th2 responses to mite allergen. 35th Annual Scientific Meeting of the Australasian Society for Immunology/14th International HLA and Immunogenetics Workshops, Melbourne, Australia, 29 November - 2 December 2005. OXFORD: BLACKWELL PUBLISHING.
2004
Journal Article
HLA-DR expression on neonatal monocytes is associated with allergen-specific immune responses
Upham, John W., Holt, Patrick G., Taylor, Angie, Thornton, Catherine A. and Prescott, Susan L. (2004). HLA-DR expression on neonatal monocytes is associated with allergen-specific immune responses. Journal of Allergy and Clinical Immunology, 114 (5), 1202-1208. doi: 10.1016/j.jaci.2004.06.051
2004
Journal Article
Functional maturation of CD4 +CD25 +CTLA4 +CD45RA + T regulatory cells in human neonatal T cell responses to environmental antigens/allergens
Thornton, C. A., Upham, J. W., Wikstrom, M. E., Holt, B. J., White, G. P., Sharp, M. J., Sly, P. D. and Holt, P. G. (2004). Functional maturation of CD4 +CD25 +CTLA4 +CD45RA + T regulatory cells in human neonatal T cell responses to environmental antigens/allergens. Journal of Immunology, 173 (5), 3084-3092. doi: 10.4049/jimmunol.173.5.3084
2004
Journal Article
Higher Prostaglandin E2 Production by Dendritic Cells from Subjects with Asthma Compared with Normal Subjects
Long, Julie A., Fogel-Petrovic, Mirjana, Knight, Darryl A., Thompson, Philip J. and Upham, John W. (2004). Higher Prostaglandin E2 Production by Dendritic Cells from Subjects with Asthma Compared with Normal Subjects. American Journal of Respiratory and Critical Care Medicine, 170 (5), 485-491. doi: 10.1164/rccm.200311-1595OC
2004
Journal Article
The Role of Dendritic Cells in Asthma
Holt, P. G. and Upham, J. W. (2004). The Role of Dendritic Cells in Asthma. Current Opinion In Allergy And Clinical Immunology, 4 (1), 39-44. doi: 10.1097/00130832-200402000-00009
2004
Journal Article
Activated human dendritic cells express inducible cyclo-oxygenase and synthesize prostaglandin E2 but not prostaglandin D2
Fogel-Petrovic, Mirjana, Long, Julie A., Knight, Darryl A., Thompson, Philip J. and Upham, John W. (2004). Activated human dendritic cells express inducible cyclo-oxygenase and synthesize prostaglandin E2 but not prostaglandin D2. Immunology and Cell Biology, 82 (1), 47-54. doi: 10.1111/j.1440-1711.2004.01213.x
2003
Journal Article
Why are dendritic cells important in allergic diseases of the respiratory tract?
Upham, John W. and Stumbles, Philip A. (2003). Why are dendritic cells important in allergic diseases of the respiratory tract?. Pharmacology and Therapeutics, 100 (1), 75-87. doi: 10.1016/S0163-7258(03)00094-9
2003
Journal Article
Airway dendritic cells: Co-ordinators of immunological homeostasis and immunity in the respiratory tract
Stumbles, Philip A., Upham, John W. and Holt, Patrick G. (2003). Airway dendritic cells: Co-ordinators of immunological homeostasis and immunity in the respiratory tract. APMIS, 111 (7-8), 741-755. doi: 10.1034/j.1600-0463.2003.11107806.x
2003
Journal Article
The Role of Dendritic Cells in Immune Regulation and Allergic Airway Inflammation
Upham, John W. (2003). The Role of Dendritic Cells in Immune Regulation and Allergic Airway Inflammation. Respirology, 8 (2), 140-148. doi: 10.1046/j.1440-1843.2003.00465.x
2003
Journal Article
Dendritic cells infected with a vaccinia virus interleukin-2 vector secrete high levels of IL-2 and can become efficient antigen presenting cells that secrete high levels of the immunostimulatory cytokine IL-12
Mukherjee, Sutapa, Upham, John W., Ramshaw, Ian, Bundell, Christine, van Bruggen, Ivonne, Robinson, Bruce W. S. and Nelson, Delia J. (2003). Dendritic cells infected with a vaccinia virus interleukin-2 vector secrete high levels of IL-2 and can become efficient antigen presenting cells that secrete high levels of the immunostimulatory cytokine IL-12. Cancer Gene Therapy, 10 (8), 591-602. doi: 10.1038/sj.cgt.7700604
2003
Journal Article
Neonatal interleukin-12 capacity is associated with variations in allergen-specific immune responses in the neonatal and postnatal periods
Prescott, S. L., Taylor, A., King, B., Dunstan, J., Upham, J. W., Thornton, C. A. and Holt, P. G. (2003). Neonatal interleukin-12 capacity is associated with variations in allergen-specific immune responses in the neonatal and postnatal periods. Clinical and Experimental Allergy, 33 (5), 566-572. doi: 10.1046/j.1365-2222.2003.01659.x
2002
Journal Article
Development of Interleukin-12-Producing Capacity throughout Childhood
Upham, John W., Lee, Peter T., Holt, Barbara J., Heaton, Tricia, Prescott, Susan L., Sharp, Mary J., Sly, Peter D. and Holt, Patrick G. (2002). Development of Interleukin-12-Producing Capacity throughout Childhood. Infection and Immunity, 70 (12), 6583-6588. doi: 10.1128/IAI.70.12.6583-6588.2002
Funding
Past funding
Supervision
Availability
- Honorary Professor John Upham is:
- Available for supervision
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Available projects
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Immune dysregulation in asthma and host defence against respiratory viruses
Our program of translational research is focussed on the study of immune function and dysfunction in asthma, and host defence against respiratory viruses, especially human rhinoviruses. We are interested in the mechanisms leading to excessive airway inflammation in asthma, and why people with asthma are unusually susceptible to asthma attacks during respiratory viral infections. Our aim is to discover new therapeutic targets in severe asthma.
Research Projects
- The function of key immune cells such as antigen presenting cells and NK cells
- The role of polarizing cytokines such as IL-33, IL-25 and TSLP in altering host defence against viruses.
- How macrolide antibiotics alter immune function
Supervision history
Current supervision
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Doctor Philosophy
Transmission dynamics of multi-drug resistant tuberculosis amongst immune suppressed patients exposed to an infectious case
Associate Advisor
Other advisors: Professor Antje Blumenthal, Professor Rachel Thomson
Completed supervision
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2023
Doctor Philosophy
Advancing management of pulmonary thromboembolic disease: from acute pulmonary embolism to pulmonary hypertension
Principal Advisor
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2023
Doctor Philosophy
Using proteomics to understand and prevent asthma exacerbations with macrolide antibiotics
Principal Advisor
Other advisors: Professor Ian Yang
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2021
Doctor Philosophy
Role of Regulatory T cells in modulating antiviral immune responses to rhinovirus: relevance to asthma
Principal Advisor
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2019
Doctor Philosophy
The impact of asthma, toll-like receptors 7 and 8, genetic and clinical determinants on antiviral immune response
Principal Advisor
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2020
Doctor Philosophy
The influence of maternal diet on microbiome assembly and severity of viral bronchiolitis in the offspring
Associate Advisor
Other advisors: Associate Professor Paul Dennis
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2019
Doctor Philosophy
The role of necroptosis in the development of severe bronchiolitis and subsequent asthma
Associate Advisor
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2018
Doctor Philosophy
The role of the interleukin-6 pathway in asthma
Associate Advisor
Other advisors: Professor Nick Martin
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2017
Doctor Philosophy
A critical contribution of the airway epithelium to the pathogenesis of viral bronchiolitis and asthma
Associate Advisor
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2016
Doctor Philosophy
The role of interferon regulatory factor 3 and 7 in virus-induced bronchiolitis and the onset of asthma.
Associate Advisor
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2016
Doctor Philosophy
Understanding the cellular and molecular processes that link RAGE gene-deletion with the development of pneumovirus-induced bronchiolitis and paucigranulocytic asthma
Associate Advisor
Other advisors: Professor Peter Sly
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2015
Doctor Philosophy
The plasmacytoid dendritic cell: a cell at the cross-roads in asthma
Associate Advisor
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2015
Doctor Philosophy
Chronic wet cough in children and further exploration of protracted bacterial bronchitis
Associate Advisor
Media
Enquiries
Contact Honorary Professor John Upham directly for media enquiries about:
- Allergies
- Asthma
- Chronic obstructive pulmonary disease
- Dendritic cells
- Immunity
- Lung infections
- Lungs - virus infections
- Virus infections of the lung
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