
Overview
Background
John Upham is a clinical scientist and physician with longstanding research interests in the immunological basis of asthma and chronic lung disease, the role of dendritic cells in allergy and virus infections of the lung, and the development of novel approaches to severe asthma treatment.
John is highly influential in his field, with > 195 publications, > 5,400 citations and an H index of 46. Since 2009, he has 112 publications (1st/senior author on 45%) with a Field-Weighted Citation Impact of 2.03. Moreover, 21.5% of publications are in the top 10% of most-cited publications worldwide (field-weighted). His publications have been cited in >20 different subject areas, demonstrating translation to fields other than Medicine. His research has international reach with citations in 80 countries (Scopus Dec 2018).
In the last 10 years, he has secured over $24 million in research funding. John has been awarded 8 NHMRC Project grants (4 as CIA in the last 5 years), 2 NHMRC CRE (“Closing the gap in Indigenous Lung Health” and “Severe Asthma”), and 1 NHMRC Development Grant. He currently holds NHMRC grants of $7.5 million, including $2.96 million as CIA. John was regularly an invited (9x), plenary (3x) and Chair (9x) at national and international conferences in the last 5 years. In recognition of his international standing and influence in the field, he was elected Fellow of the American Academy of Allergy, Asthma & Immunology (2004) and the Thoracic Society of Australia and New Zealand (2015).
Availability
- Honorary Professor John Upham is:
- Available for supervision
- Media expert
Fields of research
Qualifications
- Doctor of Philosophy, University of Western Australia
Research interests
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Immune function and susceptibility to virus infections in asthma and COPD
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Plasmacytoid dendritic cells
Type I interferon production Immune regulation
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Severe asthma: towards evidence-based assessment and management
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Innate immunity and bacterial infections of the lungs
Bronchiectasis and chronic suppurative lung disease in children Lung health in Indigenous children
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Allergy and immune tolerance
Research impacts
John is currently the President (2021-22) of the Thoracic Society of Australia and Zealand and is a key member of the NHMRC funded Centre of Research Excellence (CRE) in Asthma Treatable Traits. He has played a leadership role in organising and co-chairing three recent national symposia on severe asthma to facilitate research collaboration, build research and clinical capacity, and improve models of care for severe asthma. He has been a member of multiple advisory boards to pharmaceutical companies, both international and national (AstraZeneca, GSK, Novartis, Nycomed, Boehringer-Ingelheim, Mundipharma, Menarini), and has provided advice to the Pharmaceutical Benefits Advisory Committee. His research has provided new treatment options for severe asthma, and guided the appropriate length of antibiotic treatment for Indigenous children with pneumonia, protracted bacterial bronchitis and bronchiectasis. John's research will inform best use of influenza vaccination in COPD, and guide the use of conjugate vaccines to improve immunity to Haemophilus in Indigenous children. He contributed to Clinical Practice Guidelines for the use of omalizumab and mepolizumab in Australia and he was part of the working group that prepared a web-based Severe Asthma Toolkit for the Severe Asthma CRE.
Works
Search Professor John Upham’s works on UQ eSpace
1998
Conference Publication
Induction of eosinophilic differentiation involves selective up-regulation of beta-7 integrin
Lundahl, J., Sehmi, R., Hayes, L., Upham, J., Howie, K. and Denburg, J. A. (1998). Induction of eosinophilic differentiation involves selective up-regulation of beta-7 integrin. Unknown, Unknown, Unknown. ST LOUIS: MOSBY-YEAR BOOK INC.
1997
Journal Article
Selective inhibition of T cell proliferation but not expression of effector function by human alveolar macrophages
Upham, J. W., Strickland, D. H., Robinson, B. W. S. and Holt, P. G. (1997). Selective inhibition of T cell proliferation but not expression of effector function by human alveolar macrophages. Thorax, 52 (9), 786-795. doi: 10.1136/thx.52.9.786
1997
Conference Publication
T-cell proliferative responses to mite allergens are detectable in most individuals regardless of atopic status and age
Upham, J. W. (1997). T-cell proliferative responses to mite allergens are detectable in most individuals regardless of atopic status and age. 36th Annual Meeting of Japan Society of Chest Diseases, Utsunomiya City, Japan, April 1996. Richmond, VIC Australia: John Wiley & Sons. doi: 10.1111/j.1440-1843.1997.tb00069.x
1996
Conference Publication
Role of dendritic cells, macrophages, and gamma delta T cells in antigen processing and presentation in the respiratory mucosa
Holt, P. G., Nelson, D. J., McWilliam, A. S., Cooper, D., Strickland, D. and Upham, J. W. (1996). Role of dendritic cells, macrophages, and gamma delta T cells in antigen processing and presentation in the respiratory mucosa. 8th International Congress of Mucosal Immunology, San Diego CA, United States, 4 June 1995. SAN DIEGO: Academic Press. doi: 10.1016/B978-012394330-9/50006-5
1995
Journal Article
Malignant mesothelioma: new insights into tumour biology and immunology as a basis for new treatment approaches
Upham, J. W., Garlepp, M. J., Musk, A. W. and Robinson, B. W. S. (1995). Malignant mesothelioma: new insights into tumour biology and immunology as a basis for new treatment approaches. Thorax, 50 (8), 887-893. doi: 10.1136/thx.50.8.887
1995
Journal Article
Inhalant allergen-specific T-cell reactivity is detectable in close to 100% of atopic and normal individuals: covert responses are unmasked by serum-free medium
Upham, J.W., Holt, B.J., Baron-Hay, M.J., Yabuhara, A., Hales, B.J., Thomas, W.R., Loh, R.K., O'Keeffe, P.T., Palmer, L. and Le Souef, P.N. (1995). Inhalant allergen-specific T-cell reactivity is detectable in close to 100% of atopic and normal individuals: covert responses are unmasked by serum-free medium. Clinical and Experimental Allergy, 25 (7), 634-42.
1995
Journal Article
Inhalant allergen-specific T-cell reactivity is detectable in close to 100% of atopic and normal individuals: Covert responses are unmasked by serum-free medium
Upham, J. W., Holt, B. J., Baron-Hay, M. J., Yabuhara, A., Hales, B. J., Thomas, W. R., Loh, R. K. S., O'Keeffe, P. T., Palmer, L., Le Souef, P. N., Sly, P. D., Burton, P. R., Robinson, B. W. S. and Holt, P. G. (1995). Inhalant allergen-specific T-cell reactivity is detectable in close to 100% of atopic and normal individuals: Covert responses are unmasked by serum-free medium. Clinical and Experimental Allergy, 25 (7), 634-642. doi: 10.1111/j.1365-2222.1995.tb01111.x
1995
Journal Article
T-cell 'priming' against environmental allergens in human neonates: Sequential deletion of food antigen reactivity during infancy with concomitant expansion of responses to ubiquitous inhalant allergens
Holt, P. G., O'Keefe, P., Holt, B. J., Upham, J. W., Baron-Hay, M. J., Suphioglu, C., Knox, B., Stewart, G. A., Thomas, W. R. and Sly, P. D. (1995). T-cell 'priming' against environmental allergens in human neonates: Sequential deletion of food antigen reactivity during infancy with concomitant expansion of responses to ubiquitous inhalant allergens. Pediatric Allergy and Immunology, 6 (2), 85-90. doi: 10.1111/j.1399-3038.1995.tb00264.x
1995
Journal Article
Alveolar macrophages from humans and rodents selectively inhibit T-cell proliferation but permit T-cell activation and cytokine secretion
Upham, J. W., Strickland, D. H., Bilyk, N., Robinson, B. W. S. and Holt, P. G. (1995). Alveolar macrophages from humans and rodents selectively inhibit T-cell proliferation but permit T-cell activation and cytokine secretion. Immunology, 84 (1), 142-147.
1994
Journal Article
Functional analysis of human bronchial mucosal T cells extracted with interleukin-2
Upham, J. W., McMenamin, C., Schon-Hegrad, M. A., Robinson, B. W. S. and Holt, P. G. (1994). Functional analysis of human bronchial mucosal T cells extracted with interleukin-2. American Journal of Respiratory and Critical Care Medicine, 149 (6), 1608-1613. doi: 10.1164/ajrccm.149.6.7911708
1993
Journal Article
Interferon alpha and doxorubicin in malignant mesothelioma: a phase II study
Upham, J. W., Musk, A. W., van Hazel, G., Byrne, M. and Robinson, B. W. S. (1993). Interferon alpha and doxorubicin in malignant mesothelioma: a phase II study. Australian and New Zealand Journal of Medicine, 23 (6), 683-687. doi: 10.1111/j.1445-5994.1993.tb04727.x
1993
Conference Publication
The scientific basis for the immunotherapy of human malignant mesothelioma
Robinson, B. W. S., Manning, L. S., Bowman, R. V., Christmas, T. I., Musk, A. W., Davis, M. R., Bielefeldt-Ohmann, H., Upham, J. and Garlepp, M. J. (1993). The scientific basis for the immunotherapy of human malignant mesothelioma. International Conference on Mesothelial Cell and Mesothelioma: Past, Present and Future, Paris, France, 20 September - 2 October 1991. European Respiratory Society: Lausanne, Switzerland.
1992
Journal Article
Utility of squamous cell carcinoma antigen (SCC Ag) as a tumour marker in pulmonary malignancy
Upham, J. and Campbell, B. (1992). Utility of squamous cell carcinoma antigen (SCC Ag) as a tumour marker in pulmonary malignancy. Respiratory Medicine, 86 (3), 201-203. doi: 10.1016/S0954-6111(06)80055-7
1992
Journal Article
Investigation of pleural effusion: the role of bronchoscopy
Upham, J. W., Mitchell, C. A., Armstrong, J. G. and Kelly, W. T. (1992). Investigation of pleural effusion: the role of bronchoscopy. Australian and New Zealand Journal of Medicine, 22 (1), 41-43. doi: 10.1111/j.1445-5994.1992.tb01707.x
1992
Journal Article
Investigation of pleural effusion: the role of bronchoscopy
Upham, J W, Mitchell, C A, Armstrong, J G and Kelly, W T (1992). Investigation of pleural effusion: the role of bronchoscopy. Australian and New Zealand Journal of Medicine, 22 (1), 41-3. doi: 10.1111/j.1445-5994.1992.tb01707.x
1983
Journal Article
Dystonic reaction to metoclopramide
Upham, J. W. (1983). Dystonic reaction to metoclopramide. Medical Journal of Australia, 1 (1), 12-12. doi: 10.5694/j.1326-5377.1983.tb136014.x
Funding
Past funding
Supervision
Availability
- Honorary Professor John Upham is:
- Available for supervision
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Available projects
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Immune dysregulation in asthma and host defence against respiratory viruses
Our program of translational research is focussed on the study of immune function and dysfunction in asthma, and host defence against respiratory viruses, especially human rhinoviruses. We are interested in the mechanisms leading to excessive airway inflammation in asthma, and why people with asthma are unusually susceptible to asthma attacks during respiratory viral infections. Our aim is to discover new therapeutic targets in severe asthma.
Research Projects
- The function of key immune cells such as antigen presenting cells and NK cells
- The role of polarizing cytokines such as IL-33, IL-25 and TSLP in altering host defence against viruses.
- How macrolide antibiotics alter immune function
Supervision history
Current supervision
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Doctor Philosophy
Transmission dynamics of multi-drug resistant tuberculosis amongst immune suppressed patients exposed to an infectious case
Associate Advisor
Other advisors: Professor Antje Blumenthal, Professor Rachel Thomson
Completed supervision
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2023
Doctor Philosophy
Advancing management of pulmonary thromboembolic disease: from acute pulmonary embolism to pulmonary hypertension
Principal Advisor
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2023
Doctor Philosophy
Using proteomics to understand and prevent asthma exacerbations with macrolide antibiotics
Principal Advisor
Other advisors: Professor Ian Yang
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2021
Doctor Philosophy
Role of Regulatory T cells in modulating antiviral immune responses to rhinovirus: relevance to asthma
Principal Advisor
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2019
Doctor Philosophy
The impact of asthma, toll-like receptors 7 and 8, genetic and clinical determinants on antiviral immune response
Principal Advisor
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2020
Doctor Philosophy
The influence of maternal diet on microbiome assembly and severity of viral bronchiolitis in the offspring
Associate Advisor
Other advisors: Associate Professor Paul Dennis
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2019
Doctor Philosophy
The role of necroptosis in the development of severe bronchiolitis and subsequent asthma
Associate Advisor
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2018
Doctor Philosophy
The role of the interleukin-6 pathway in asthma
Associate Advisor
Other advisors: Professor Nick Martin
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2017
Doctor Philosophy
A critical contribution of the airway epithelium to the pathogenesis of viral bronchiolitis and asthma
Associate Advisor
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2016
Doctor Philosophy
The role of interferon regulatory factor 3 and 7 in virus-induced bronchiolitis and the onset of asthma.
Associate Advisor
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2016
Doctor Philosophy
Understanding the cellular and molecular processes that link RAGE gene-deletion with the development of pneumovirus-induced bronchiolitis and paucigranulocytic asthma
Associate Advisor
Other advisors: Professor Peter Sly
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2015
Doctor Philosophy
The plasmacytoid dendritic cell: a cell at the cross-roads in asthma
Associate Advisor
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2015
Doctor Philosophy
Chronic wet cough in children and further exploration of protracted bacterial bronchitis
Associate Advisor
Media
Enquiries
Contact Honorary Professor John Upham directly for media enquiries about:
- Allergies
- Asthma
- Chronic obstructive pulmonary disease
- Dendritic cells
- Immunity
- Lung infections
- Lungs - virus infections
- Virus infections of the lung
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