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2020 Conference Publication A spider-venom peptide for preventing ischemic injuries of the heart: application to heart transplant and myocardial infarctionRedd, M. A., Scheuer, S. E., Saez, N. J., Macdonald, P. S., Palpant, N. J. and King, G. F. (2020). A spider-venom peptide for preventing ischemic injuries of the heart: application to heart transplant and myocardial infarction. Venom Week, Gainesville, FL, United States, 4-7 March, 2020. Oxford, United Kingdom : Elsevier. |
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2020 Other Outputs Human pluripotent stem cell derived endocardial endotheliumMurry, Charles E., Pabon, Lil and Palpant, Nathan (2020). Human pluripotent stem cell derived endocardial endothelium. 10612002 (2020). |
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2019 Journal Article Genotype-free demultiplexing of pooled single-cell RNA-seqXu, Jun, Falconer, Caitlin, Nguyen, Quan, Crawford, Joanna, McKinnon, Brett D., Mortlock, Sally, Senabouth, Anne, Andersen, Stacey, Chiu, Han Sheng, Jiang, Longda, Palpant, Nathan J., Yang, Jian, Mueller, Michael D., Hewitt, Alex W., Pébay, Alice, Montgomery, Grant W., Powell, Joseph E. and Coin, Lachlan J. M. (2019). Genotype-free demultiplexing of pooled single-cell RNA-seq. Genome Biology, 20 (1) 290, 290. doi: 10.1186/s13059-019-1852-7 |
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2018 Journal Article Evidence for minimal cardiogenic potential of stem cell sntigen 1-positive cells in the adult mouse heartNeidig, Lauren E., Weinberger, Florian, Palpant, Nathan J., Mignone, John, Martinson, Amy M., Sorensen, Daniel W., Bender, Ingrid, Nemoto, Natsumi, Reinecke, Hans, Pabon, Lil, Molkentin, Jeffery D., Murry, Charles E. and van Berlo, Jop H. (2018). Evidence for minimal cardiogenic potential of stem cell sntigen 1-positive cells in the adult mouse heart. Circulation, 138 (25), 2960-2962. doi: 10.1161/CIRCULATIONAHA.118.035273 |
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2018 Journal Article Single-cell transcriptomic analysis of cardiac differentiation from human PSCs reveals HOPX-dependent cardiomyocyte maturationFriedman, Clayton E., Nguyen, Quan, Lukowski, Samuel W., Helfer, Abbigail, Chiu, Han Sheng, Miklas, Jason, Levy, Shiri, Suo, Shengbao, Han, Jing-Dong Jackie, Osteil, Pierre, Peng, Guangdun, Jing, Naihe, Baillie, Greg J., Senabouth, Anne, Christ, Angelika N., Bruxner, Timothy J., Murry, Charles E., Wong, Emily S., Ding, Jun, Wang, Yuliang, Hudson, James, Ruohola-Baker, Hannele, Bar-Joseph, Ziv, Tam, Patrick P.L., Powell, Joseph E. and Palpant, Nathan J. (2018). Single-cell transcriptomic analysis of cardiac differentiation from human PSCs reveals HOPX-dependent cardiomyocyte maturation. Cell Stem Cell, 23 (4), 586-598. doi: 10.1016/j.stem.2018.09.009 |
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2018 Journal Article Genetic lineage tracing of Sca-1 cells reveals endothelial but not myogenic contribution to the murine heartVagnozzi, Ronald J., Sargent, Michelle A., Lin, Suh-Chin J., Palpant, Nathan J., Murry, Charles E. and Molkentin, Jeffery D. (2018). Genetic lineage tracing of Sca-1 cells reveals endothelial but not myogenic contribution to the murine heart. Circulation, 138 (25), CIRCULATIONAHA.118.035210-2939. doi: 10.1161/CIRCULATIONAHA.118.035210 |
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2018 Journal Article Single-cell RNA-seq of human induced pluripotent stem cells reveals cellular heterogeneity and cell state transitions between subpopulationsNguyen, Quan H., Lukowski, Samuel W., Chiu, Han Sheng, Senabouth, Anne, Bruxner, Timothy J.C., Christ, Angelika N., Palpant, Nathan J. and Powell, Joseph E. (2018). Single-cell RNA-seq of human induced pluripotent stem cells reveals cellular heterogeneity and cell state transitions between subpopulations. Genome Research, 28 (7), 1053-1066. doi: 10.1101/gr.223925.117 |
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2018 Journal Article ALPK2 promotes cardiogenesis in zebrafish and human pluripotent stem cellsHofsteen, Peter, Robitaille, Aaron Mark, Strash, Nicholas, Palpant, Nathan, Moon, Randall T., Pabon, Lil and Murry, Charles E. (2018). ALPK2 promotes cardiogenesis in zebrafish and human pluripotent stem cells. iScience, 2, 88-100. doi: 10.1016/j.isci.2018.03.010 |
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2018 Journal Article Inducible CRISPR genome editing platform in naive human embryonic stem cells reveals JARID2 function in self-renewalFerreccio, Amy, Mathieu, Julie, Detraux, Damien, Logeshwaran, Somasundaram, Cavanaugh, Christopher, Sopher, Bryce, Fischer, Karin, Bello, Thomas, Hussein, Assis M., Levy, Shiri, Cook, Savannah, Sidhu, Sonia B, Artoni, Filippo, Palpant, Nathan J., Reinecke, Hans, Wang, Yuliang, Paddison, Patrick, Murry, Charles, Jayadev, Suman, Ware, Carol and Ruohola-Baker, Hannele (2018). Inducible CRISPR genome editing platform in naive human embryonic stem cells reveals JARID2 function in self-renewal. Cell Cycle, 17 (5), 1-15. doi: 10.1080/15384101.2018.1442621 |
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2018 Conference Publication Genetic networks modulating cell fate specification and contributing to cardiac disease risk in hiPSC-derived cardiomyocytes at single cell resolutionNguyen, Quan H., Lukowski, Samuel W., Chiu, Han S., Friedman, Clayton E., Senabouth, Anne, Crowhurst, Liam, Bruxner, Timothy J. C., Christ, Angelika N., Hudson, James, Ding, Jun, Bar-Joseph, Ziv, Tam, Patrick P. L., Palpant, Nathan J. and Powell, Joseph E. (2018). Genetic networks modulating cell fate specification and contributing to cardiac disease risk in hiPSC-derived cardiomyocytes at single cell resolution. Human Genome Meeting 2018, Yokohama, Japan, 12-15 March 2018. London, United Kingdom: Henry Stewart Publications LLP. doi: 10.1186/s40246-018-0138-6 |
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2017 Journal Article Subtle modifications to oxytocin produce ligands that retain potency and improved selectivity across speciesMuttenthaler, Markus, Andersson, Asa, Vetter, Irina, Menon, Rohit, Busnelli, Marta, Ragnarsson, Lotten, Bergmayr, Christian, Arrowsmith, Sarah, Deuis, Jennifer R., Chiu, Han Sheng, Palpant, Nathan J., O'Brien, Margaret, Smith, Terry J., Wray, Susan, Neumann, Inga D., Gruber, Christian W., Lewis, Richard J. and Alewood, Paul F. (2017). Subtle modifications to oxytocin produce ligands that retain potency and improved selectivity across species. Science Signaling, 10 (508) eaan3398, 1-13. doi: 10.1126/scisignal.aan3398 |
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2017 Journal Article A transcribed enhancer dictates mesendoderm specification in pluripotencyAlexanian, Michael, Maric, Daniel, Jenkinson, Stephen P., Mina, Marco, Friedman, Clayton E., Ting, Ching-Chia, Micheletti, Rudi, Plaisance, Isabelle, Nemir, Mohamed, Maison, Damien, Kernen, Jasmin, Pezzuto, Iole, Villeneuve, Dominic, Burdet, Frederic, Ibberson, Mark, Leib, Stephen L., Palpant, Nathan J., Hernandez, Nouria, Ounzain, Samir and Pedrazzini, Thierry (2017). A transcribed enhancer dictates mesendoderm specification in pluripotency. Nature Communications, 8 (1) 1806, 1-19. doi: 10.1038/s41467-017-01804-w |
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2017 Journal Article Chromatin and transcriptional analysis of mesoderm progenitor cells identifies HOPX as a regulator of primitive hematopoiesisPalpant, Nathan J., Wang, Yuliang, Hadland, Brandon, Zaunbrecher, Rebecca J., Redd, Meredith, Jones, Daniel, Pabon, Lil, Jain, Rajan, Epstein, Jonathan, Ruzzo, Walter L., Zheng, Ying, Bernstein, Irwin, Margolin, Adam and Murry, Charles E. (2017). Chromatin and transcriptional analysis of mesoderm progenitor cells identifies HOPX as a regulator of primitive hematopoiesis. Cell Reports, 20 (7), 1597-1608. doi: 10.1016/j.celrep.2017.07.067 |
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2017 Journal Article Nkx2.5 marks angioblasts that contribute to hemogenic endothelium of the endocardium and dorsal aortaZamir, Lyad, Singh, Reena, Nathan, Elisha, Patrick, Ralph, Yifa, Oren, Yahalom-Ronen, Yfat, Arrafi, Alaa A., Schultheiss, Thomas M., Suo, Shengbao, Han, Jing-Dong Jackie, Peng, Guangdun, Jing, Naihe, Wang, Yuliang, Palpant, Nathan, Tam, Patrick P. L., Harveyz, Richard P. and Tzahor, Eldad (2017). Nkx2.5 marks angioblasts that contribute to hemogenic endothelium of the endocardium and dorsal aorta. ELife, 6 e20994. doi: 10.7554/eLife.20994 |
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2017 Journal Article Generating high-purity cardiac and endothelial derivatives from patterned mesoderm using human pluripotent stem cellsPalpant, Nathan J., Pabon, Lil, Friedman, Clayton E., Roberts, Meredith, Hadland, Brandon, Zaunbrecher, Rebecca J., Bernstein, Irwin, Zheng, Ying and Murry, Charles E. (2017). Generating high-purity cardiac and endothelial derivatives from patterned mesoderm using human pluripotent stem cells. Nature Protocols, 12 (1), 15-31. doi: 10.1038/nprot.2016.153 |
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2017 Conference Publication Epigenetic and transcriptional analysis of mesoderm progenitor cells identifies HOPX as a novel regulator of hemogenic endotheliumPalpant, Nathan, Wang, Yuliang, Hadland, Brandon, Zaunbrecher, Rebecca, Redd, Meredith, Pabon, Lil, Jain, Rajan, Epstein, Jonathan, Zheng, Ying, Bernstein, Irwin, Margolin, Adam and Murry, Charles (2017). Epigenetic and transcriptional analysis of mesoderm progenitor cells identifies HOPX as a novel regulator of hemogenic endothelium. 18th International Congress of Developmental Biology, Singapore, Singapore, 18 - 22 June 2017. E Park, Shannon, Clare Ireland: Elsevier Ireland. doi: 10.1016/j.mod.2017.04.263 |
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2016 Journal Article Erratum to: Statistically based splicing detection reveals neural enrichment and tissue-specific induction of circular RNA during human fetal development [Genome Biology, 16, (2016) (126)], DOI: 10.1186/s13059-015-0690-5Szabo, Linda, Morey, Robert, Palpant, Nathan J., Wang, Peter L., Afari, Nastaran, Jiang, Chuan, Parast, Mana M., Murry, Charles E., Laurent, Louise C. and Salzman, Julia (2016). Erratum to: Statistically based splicing detection reveals neural enrichment and tissue-specific induction of circular RNA during human fetal development [Genome Biology, 16, (2016) (126)], DOI: 10.1186/s13059-015-0690-5. Genome Biology, 17 (1) 263. doi: 10.1186/s13059-016-1123-9 |
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2016 Journal Article The developmental origins and lineage contributions of endocardial endotheliumNakano, Atsushi, Nakano, Haruko, Smith, Kelly A. and Palpant, Nathan J. (2016). The developmental origins and lineage contributions of endocardial endothelium. Biochimica et Biophysica Acta. Molecular Cell Research, 1863 (7), 1937-1947. doi: 10.1016/j.bbamcr.2016.01.022 |
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2015 Journal Article Statistically based splicing detection reveals neural enrichment and tissue-specific induction of circular RNA during human fetal developmentSzabo, Linda, Morey, Robert, Palpant, Nathan J., Wang, Peter L., Afari, Nastaran, Jiang, Chuan, Parast, Mana M., Murry, Charles E., Laurent, Louise C. and Salzman, Julia (2015). Statistically based splicing detection reveals neural enrichment and tissue-specific induction of circular RNA during human fetal development. Genome Biology, 16 (1) 126. doi: 10.1186/s13059-015-0690-5 |
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2015 Journal Article Cardiac development in zebrafish and human embryonic stem cells is inhibited by exposure to tobacco cigarettes and ecigarettesPalpant, Nathan J., Hofsteen, Peter, Pabon, Lil, Reinecke, Hans and Murry, Charles E. (2015). Cardiac development in zebrafish and human embryonic stem cells is inhibited by exposure to tobacco cigarettes and ecigarettes. PLoS ONE, 10 (5) 0126259, e0126259.1-e0126259. 19. doi: 10.1371/journal.pone.0126259 |
