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2026 Journal Article Computational modelling of cell identityShim, Woo Jun, Chow, Chris Siu Yeung, Bao, Shaine Chenxin, Zhao, Qiongyi and Palpant, Nathan J. (2026). Computational modelling of cell identity. Biochemical Journal, 483 (6), 1049-1071. doi: 10.1042/bcj20250132 |
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2026 Journal Article Identifying therapeutic targets in low‐grade serous ovarian carcinomas with no specific molecular profilePishas, Kathleen I, Cowley, Karla J, Marinovic, Evanny, Köbel, Martin, Llaurado‐Fernandez, Marta, Kim, Hannah, Bao, Shaine Chenxin, Mizikovsky, Dalia, Palpant, Nathan J, Shrestha, Raunak, Vary, Robert, Luu, Jennii, Meunier, Liliane, Semple, Timothy, Blancafort, Pilar, Golden, Emily, Cohen, Paul A, Carey, Mark S, Campbell, Ian G, Simpson, Kaylene J and Cheasley, Dane (2026). Identifying therapeutic targets in low‐grade serous ovarian carcinomas with no specific molecular profile. The Journal of Pathology path.70075. doi: 10.1002/path.70075 |
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2026 Journal Article Preparing healthcare providers to use polygenic risk scores: a qualitative study of learning needs and educational preferencesClark, Amy, Wallingford, Courtney K., Berkman, Jennifer, McInerney-Leo, Aideen, Nisselle, Amy, Terrill, Bronwyn, Palpant, Nathan, Young, Mary-Anne, James, Paul A. and Yanes, Tatiane (2026). Preparing healthcare providers to use polygenic risk scores: a qualitative study of learning needs and educational preferences. BMJ Open, 16 (5) e111898, e111898-5. doi: 10.1136/bmjopen-2025-111898 |
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2026 Journal Article A scalable, multi-resolution consensus clustering approach for prioritizing robust signals from high-throughput screensBao, Shaine Chenxin, Pishas, Kathleen I, Cowley, Karla J, Zhao, Qiongyi, Goodall, Emily C A, Henderson, Ian R, Liu, Xin, Marinovic, Evanny, Carey, Mark S, Campbell, Ian G, Simpson, Kaylene J, Cheasley, Dane, Mizikovsky, Dalia and Palpant, Nathan J (2026). A scalable, multi-resolution consensus clustering approach for prioritizing robust signals from high-throughput screens. Briefings in Bioinformatics, 27 (3) bbag242. doi: 10.1093/bib/bbag242 |
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2026 Journal Article Glycaemic variability underlies myocyte dysfunction and myocardial injury risk in diabetesCao, Yuanzhao, Redd, Meredith A., Outhwaite, Jennifer E., Mizikovsky, Dalia, Shim, Woo Jun, Fang, Chen, Vedelago, Courtney, Tan, Clarissa, Wu, Zhixuan, Daygon, Dara, Stark, Terra, Palfreyman, Robin, Chiu, Han Sheng, Thomas, Ulrich, Dragicevic, Elena, Sng, Julian D. J., Saez, Natalie J., Barrett, Helen L., Dorey, Emily S., King, Glenn F., Wuethrich, Alain, Trau, Matt, Shah, Sonia, Short, Kirsty R. and Palpant, Nathan J. (2026). Glycaemic variability underlies myocyte dysfunction and myocardial injury risk in diabetes. Nature Communications. doi: 10.1038/s41467-026-71809-x |
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2026 Other Outputs Protocol-dependent cardiomyocyte states determine disease modelling capacity of human iPSCsShen, Sophie, Tan, Clarissa, Cao, Yuanzhao, Chow, Chris Siu Yeung, Mizikovsky, Dalia, Reid, Janice, Dingwall, Steve, Prowse, Andrew, Sun, Yuliangzi, Wu, Zhixuan, Negi, Sumedha, Bao, Shaine Chenxin, Sinniah, Enakshi, Shim, Woo Jun, Zhao, Qiongyi, Thorpe, Jordan, Zahabi, Azadeh, Hanna, Amy, Cheng, Trishia, Hill, Adam, Hudson, James, Chong, James J. H. and Palpant, Nathan J. (2026). Protocol-dependent cardiomyocyte states determine disease modelling capacity of human iPSCs. doi: 10.64898/2026.03.29.715135 |
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2026 Other Outputs Hierarchical control of cardiomyocyte maturation and ischaemia sensitivity by metabolic culture conditionsCao, Yuanzhao, Chow, Chris Siu Yeung, Negi, Sumedha, Shim, Woo Jun, Shen, Sophie, Fang, Chen and Palpant, Nathan J. (2026). Hierarchical control of cardiomyocyte maturation and ischaemia sensitivity by metabolic culture conditions. doi: 10.64898/2026.03.12.711459 |
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2026 Journal Article Bacterial reporter–paired scRNA sequencing reveals cross talk between zinc starvation and zinc toxicity in macrophage antibacterial defensevon Pein, Jessica B., Andersen, Stacey B., Xu, Jon, Phan, Minh-Duy, Dalton, Emma K., Koczerka, Michael, Stocks, Claudia J., Curson, James E. B., Vandeleur, Zoe, Condon, Nicholas D., Hancock, Steven J., Nefzger, Christian M., Palpant, Nathan J., Ramnath, Divya, Kapetanovic, Ronan, Schembri, Mark A. and Sweet, Matthew J. (2026). Bacterial reporter–paired scRNA sequencing reveals cross talk between zinc starvation and zinc toxicity in macrophage antibacterial defense. Proceedings of the National Academy of Sciences, 123 (11) e2530503123, 1-12. doi: 10.1073/pnas.2530503123 |
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2026 Journal Article Hi1a delivered in various modes reduces myocardial infarct size in miceWu, Jianxin, Gao, Ling, Villanueva, Jeanette, Doyle, Aoife, Dutta, Sanjay, Joshi, Yashutosh, MacLean, Campbell, Kesteven, Scott, King, Glenn, Palpant, Nathan, Feneley, Michael, Iismaa, Siiri, Graham, Robert and Macdonald, Peter (2026). Hi1a delivered in various modes reduces myocardial infarct size in mice. Journal of Molecular and Cellular Cardiology Plus, 15 100753, 100753. doi: 10.1016/j.jmccpl.2025.100753 |
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2026 Journal Article Human Hearts Intrinsically Increase Cardiomyocyte Mitosis Following Myocardial InfarctionHume, Robert, Warwick, Jessica, Shim, Woo Jun, Malecki, Cassandra, Li, Mengbo, Harney, Dylan, Slaughter, Eugene, Wang, XiaoSuo, Nguyen, Lisa, Cole, Louise, Edelman, James, Rashid, Fairooj, Houlahan, Callum, Gao, Antony, Ferguson, Angela, Chong, James, Larance, Mark, O'Sullivan, John, Palpant, Nathan, Bannon, Paul and Lal, Sean (2026). Human Hearts Intrinsically Increase Cardiomyocyte Mitosis Following Myocardial Infarction. Journal of Molecular and Cellular Cardiology Plus, 15 100505, 100505. doi: 10.1016/j.jmccpl.2025.100505 |
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2026 Journal Article The changing landscape of gene expression analysisZhao, Qiongyi, Shen, Sophie, Shim, Woo Jun and Palpant, Nathan J. (2026). The changing landscape of gene expression analysis. Briefings in Bioinformatics, 27 (2) bbag185, 2. doi: 10.1093/bib/bbag185 |
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2026 Journal Article Nanopatterned cell sheet assembly of biomimetic cardiac laminae for modeling structure-function relationshipsJiao, Alex, Macadangdang, Jesse, Kim, Jinsung, Moerk, Charles Travis, Palpant, Nathan J., Mengsteab, Paulos Y., Park, Hyeon-Cheol, Murry, Charles E. and Kim, Deok-Ho (2026). Nanopatterned cell sheet assembly of biomimetic cardiac laminae for modeling structure-function relationships. Biomaterials Research, 30 0339, 1-12. doi: 10.34133/bmr.0339 |
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2025 Journal Article Conserved facultative heterochromatin across cell types identify regulatory sequences underpinning cell identity and diseaseSinniah, Enakshi, Mizikovsky, Dalia, Shim, Woo Jun, Chow, Chris Siu Yeung, Souilmi, Yassine, Cheng, Fei-Fei, Zeng, Zhili, Laurie, Jordan, Foster, Matthew, Shah, Sonia, Bodén, Mikael, Zeng, Jian, Llamas, Bastien and Palpant, Nathan J. (2025). Conserved facultative heterochromatin across cell types identify regulatory sequences underpinning cell identity and disease. Nucleic Acids Research, 53 (20) gkaf971, 1-23. doi: 10.1093/nar/gkaf971 |
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2025 Journal Article Epigenomics and transcriptomics profiles of developing zebrafish heart cellsChahal, Gulrez, Eichenlaub, Michael P., Tondl, Markus, Pawlak, Michał, Mohenska, Monika, Grimm, Lin, Bottrell, Lauren, Drvodelic, Mark, Alaei, Sara, Hallab, Jeannette, Waylen, Lisa N., Polo, Jose M., Blanpain, Cédric, Palpant, Nathan, Rossello, Fernando J., Änkö, Minna-Liisa, Currie, Peter D., Hogan, Benjamin M., Winata, Cecilia, Salimova, Ekaterina, Nim, Hieu T. and Ramialison, Mirana (2025). Epigenomics and transcriptomics profiles of developing zebrafish heart cells. Scientific Data, 12 (1) 1620, 1-10. doi: 10.1038/s41597-025-05895-9 |
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2025 Other Outputs Contractile function maintains cardiomyocyte differentiation and inhibits cell cycle activityDevilée, Lynn A.C., Reid, Janice D., Krycer, James R., Robinson, Harley R., Humphrey, Sean J., Chow, Chris Siu Yeung, Lor, Mary, Fitzsimmons, Rebecca L., Wang, Qing-Dong, Doran, Michael, Porrello, Enzo R., Palpant, Nathan J., Foster, Simon R., Mills, Richard J. and Hudson, James E. (2025). Contractile function maintains cardiomyocyte differentiation and inhibits cell cycle activity. doi: 10.1101/2025.08.19.671044 |
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2025 Conference Publication Glycaemic variability underlies myocyte dysfunction and myocardial injury risk in diabetesCao, Y., Redd, M., Outhwaite, J., Mizikovsky, D., Shim, W., Fang, C., Wu, Z., Daygon, D., Stark, T., Palfreyman, R., Chiu, H., Tan, C., Thomas, U., Dragicevic, E., Sng, J., Barrett, H., Dorey, E., Shah, S., Short, K. and Palpant, N. (2025). Glycaemic variability underlies myocyte dysfunction and myocardial injury risk in diabetes. 73rd Annual Scientific Meeting ofthe Cardiac Society of Australia and New Zealand, Brisbane, QLD Australia, 14-17 August 2025. Chatswood, NSW Australia: Elsevier Australia. doi: 10.1016/j.hlc.2025.06.821 |
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2025 Conference Publication Recovery of rat hearts after cold storage with acid sensing ion channel inhibitor Hi1a varies by sexDutta, S. D., Villanueva, J., Gao, L., Doyle, A., Palpant, N., King, G. and Macdonald, P. (2025). Recovery of rat hearts after cold storage with acid sensing ion channel inhibitor Hi1a varies by sex. World Transplant Congress (WTC), San Francisco, CA United States, 2-6 August 2025. New York, NY United States: Elsevier. |
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2025 Conference Publication Multidimensional-Spatial Profiling of Human Heart Failure Reveals New Cardiomyocyte Subtypes and Fibro-Inflammatory NichesRashid, F., Muthiah, K., Qin, A., Sun, V., Nim, H., Sivasubramaniam, V., Barua, S., Eckford, H., O’Neil, T., Patrick, E., Clayton, Z., Reyes, L., Palpant, N., Ramialison, M., Hayward, C., Kizana, E. and Chong, J. (2025). Multidimensional-Spatial Profiling of Human Heart Failure Reveals New Cardiomyocyte Subtypes and Fibro-Inflammatory Niches. 73rd Annual Scientific Meeting of the Cardiac Society of Australia and New Zealand, Sydney, NSW Australia, 14-17 August 2025. Chatswood, NSW Australia: Elsevier. doi: 10.1016/j.hlc.2025.06.018 |
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2025 Conference Publication Human Hearts Intrinsically Increase Cardiomyocyte Mitosis Following Myocardial InfarctionHume, R., Warwick, J., Shim, W., Malecki, C., Li, M., Harney, D., Slaughter, E., Wang, X., Nguyen, L., Cole, L., Edelman, J., Rashid, F., Houlahan, C., Gao, A., Ferguson, A., Chong, J., Larance, M., O’Sullivan, J., Palpant, N., Bannon, P. and Lal, S. (2025). Human Hearts Intrinsically Increase Cardiomyocyte Mitosis Following Myocardial Infarction. 73rd Annual Scientific Meeting of the Cardiac Society of Australia and New Zealand, Sydney, NSW Australia, 14-17 August 2025. Chatswood, NSW Australia: Elsevier. doi: 10.1016/j.hlc.2025.06.332 |
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2025 Journal Article A pluripotent stem cell atlas of multilineage differentiationShen, Sophie, Werner, Tessa, Chiu, Han Sheng, Chen, Xiaoli, Nguyen, Quan and Palpant, Nathan J. (2025). A pluripotent stem cell atlas of multilineage differentiation. Scientific Data, 12 (1) 1238, 1238. doi: 10.1038/s41597-025-05549-w |
