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2013 Journal Article Latent biochemical relationships in the blood-milk metabolic axis of dairy cows revealed by statistical integration of 1H NMR spectroscopic dataMaher, Anthony D., Hayes, Benjamin, Cocks, Benjamin, Marett, Leah, Wales, William J. and Rochfort, Simone J. (2013). Latent biochemical relationships in the blood-milk metabolic axis of dairy cows revealed by statistical integration of 1H NMR spectroscopic data. Journal of Proteome Research, 12 (3), 1428-1435. doi: 10.1021/pr301056q |
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2013 Journal Article Comparison of heritabilities of dairy traits in Australian Holstein-Friesian cattle from genomic and pedigree data and implications for genomic evaluationsHaile-Mariam, M., Nieuwhof, G. J., Beard, K. T., Konstatinov, K. V. and Hayes, B. J. (2013). Comparison of heritabilities of dairy traits in Australian Holstein-Friesian cattle from genomic and pedigree data and implications for genomic evaluations. Journal of Animal Breeding and Genetics, 130 (1), 20-31. doi: 10.1111/j.1439-0388.2013.01001.x |
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2013 Journal Article Accuracy of prediction of genomic breeding values for residual feed intake and carcass and meat quality traits in Bos taurus, Bos indicus, and composite beef cattleBolormaa, S., Pryce, J. E., Kemper, K., Savin, K., Hayes, B. J., Barendse, W., Zhang, Y., Reich, C. M., Mason, B. A., Bunch, R. J., Harrison, B. E., Reverter, A., Herd, R. M., Tier, B., Graser, H. -U. and Goddard, M. E. (2013). Accuracy of prediction of genomic breeding values for residual feed intake and carcass and meat quality traits in Bos taurus, Bos indicus, and composite beef cattle. Journal of Animal Science, 91 (7), 3088-3104. doi: 10.2527/jas.2012-5827 |
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2013 Journal Article Accelerating improvement of livestock with genomic selectionMeuwissen, Theo, Hayes, Ben and Goddard, Mike (2013). Accelerating improvement of livestock with genomic selection. Annual Review of Animal Biosciences, 1 (1), 221-237. doi: 10.1146/annurev-animal-031412-103705 |
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2013 Journal Article PrefaceGondro, Cedric, Van Der Werf, Julius and Hayes, Ben (2013). Preface. Methods in Molecular Biology, 1019. doi: 10.1007/978-1-62703-447_0 |
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2013 Journal Article Detection of quantitative trait loci in Bos indicus and Bos taurus cattle using genome-wide association studiesBolormaa, Sunduimijid, Pryce, Jennie E., Kemper, Kathryn E., Hayes, Ben J., Zhang, Yuandan, Tier, Bruce, Barendse, William, Reverter, Antonio and Goddard, Mike E. (2013). Detection of quantitative trait loci in Bos indicus and Bos taurus cattle using genome-wide association studies. Genetics Selection Evolution, 45 (1) 43, 43.1-43.12. doi: 10.1186/1297-9686-45-43 |
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2013 Conference Publication Genomic regions associated with differences in fat percentage in milk between Holstein and Jersery cattleKemper, K. E., Hayes, B. J. and Goddard, M. E. (2013). Genomic regions associated with differences in fat percentage in milk between Holstein and Jersery cattle. Association for the Advancement of Animal Breeding and Genetics, Napier, New Zealand, 20-23 October 2013. Red Hook, NY, United States: Curran Associates. |
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2013 Conference Publication The symbiotic rumen microbiome and cattle performance: a brief reviewBath, C., Morrison, M., Ross, E. M., Hayes, B. J. and Cocks, B. G. (2013). The symbiotic rumen microbiome and cattle performance: a brief review. Clayton, VIC, Australia: CSIRO Publishing. doi: 10.1071/AN12369 |
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2012 Journal Article Accuracy of pedigree and genomic predictions of carcass and novel meat quality traits in multi-breed sheep data assessed by cross-validationDaetwyler, Hans D., Swan, Andrew A., van der Werf, Julius H. J. and Hayes, Ben J. (2012). Accuracy of pedigree and genomic predictions of carcass and novel meat quality traits in multi-breed sheep data assessed by cross-validation. Genetics Selection Evolution, 44 (1) 33. doi: 10.1186/1297-9686-44-33 |
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2012 Journal Article Genome position specific priors for genomic predictionBrondum, Rasmus Froberg, Su, Guosheng, Lund, Mogens Sando, Bowman, Philip J., Goddard, Michael E. and Hayes, Benjamin J. (2012). Genome position specific priors for genomic prediction. BMC Genomics, 13 (1) 543. doi: 10.1186/1471-2164-13-543 |
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2012 Journal Article Strategies and utility of imputed SNP genotypes for genomic analysis in dairy cattleKhatkar, Mehar S., Moser, Gerhard, Hayes, Ben J. and Raadsma, Herman W. (2012). Strategies and utility of imputed SNP genotypes for genomic analysis in dairy cattle. BMC Genomics, 13 (1) 538, 1-12. doi: 10.1186/1471-2164-13-538 |
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2012 Journal Article Improved accuracy of genomic prediction for dry matter intake of dairy cattle from combined European and Australian data setsde Haas, Y., Calus, M. P. L., Veerkamp, R. F., Wall, E., Coffey, M. P., Daetwyler, H. D., Hayes, B. J. and Pryce, J. E. (2012). Improved accuracy of genomic prediction for dry matter intake of dairy cattle from combined European and Australian data sets. Journal of Dairy Science, 95 (10), 6103-6112. doi: 10.3168/jds.2011-5280 |
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2012 Journal Article Long-term selection strategies for complex traits using high-density genetic markersKemper, K. E., Bowman, R. J., Pryce, J. E., Hayes, B. J. and Goddard, M. E. (2012). Long-term selection strategies for complex traits using high-density genetic markers. Journal of Dairy Science, 95 (8), 4646-4656. doi: 10.3168/jds.2011-5289 |
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2012 Journal Article A single nucleotide polymorphism on chromosome 10 is highly predictive for the polled phenotype in Australian Merino sheepDominik, S., Henshall, J. M. and Hayes, B. J. (2012). A single nucleotide polymorphism on chromosome 10 is highly predictive for the polled phenotype in Australian Merino sheep. Animal Genetics, 43 (4), 468-470. doi: 10.1111/j.1365-2052.2011.02271.x |
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2012 Journal Article High throughput whole rumen metagenome profiling using untargeted massively parallel sequencingRoss, Elizabeth M., Moate, Peter J., Bath, Carolyn R., Davidson, Sophie E., Sawbridge, Tim I., Guthridge, Kathryn M., Cocks, Ben G. and Hayes, Ben J. (2012). High throughput whole rumen metagenome profiling using untargeted massively parallel sequencing. BMC Genetics, 13 53. doi: 10.1186/1471-2156-13-53 |
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2012 Journal Article Improving accuracy of genomic predictions within and between dairy cattle breeds with imputed high-density single nucleotide polymorphism panelsErbe, M., Hayes, B. J., Matukumalli, L. K., Goswami, S., Bowman, P. J., Reich, C. M., Mason, B. A. and Goddard, M. E. (2012). Improving accuracy of genomic predictions within and between dairy cattle breeds with imputed high-density single nucleotide polymorphism panels. Journal of Dairy Science, 95 (7), 4114-4129. doi: 10.3168/jds.2011-5019 |
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2012 Journal Article Whole-genome resequencing of two elite sires for the detection of haplotypes under selection in dairy cattleLarkin, Denis M., Daetwyler, Hans D., Hernandez, Alvaro G., Wright, Chris L., Hetrick, Lorie A., Boucek, Lisa, Bachman, Sharon L., Band, Mark R., Akraiko, Tatsiana V., Cohen-Zinder, Miri, Thimmapuram, Jyothi, Macleod, Iona M., Harkins, Timothy T., McCague, Jennifer E., Goddard, Michael E., Hayes, Ben J. and Lewin, Harris A. (2012). Whole-genome resequencing of two elite sires for the detection of haplotypes under selection in dairy cattle. Proceedings of the National Academy of Sciences of the United States of America, 109 (20), 7693-7698. doi: 10.1073/pnas.1114546109 |
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2012 Journal Article Discovery and trait association of single nucleotide polymorphisms from gene regions of influence on meat tenderness and long-chain omega-3 fatty acid content in Australian lambKnight, M. I., Daetwyler, H. D., Hayes, B. J., Hayden, M. J., Ball, A. J., Pethick, D. W. and McDonagh, M. B. (2012). Discovery and trait association of single nucleotide polymorphisms from gene regions of influence on meat tenderness and long-chain omega-3 fatty acid content in Australian lamb. Animal Production Science, 52 (7), 591-600. doi: 10.1071/AN11229 |
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2012 Journal Article Accuracy of genomic predictions of residual feed intake and 250-day body weight in growing heifers using 625,000 single nucleotide polymorphism markersPryce, J. E., Arias, J., Bowman, P. J., Davis, S. R., Macdonald, K. A., Waghorn, G. C., Wales, W. J., Williams, Y. J., Spelman, R. J. and Hayes, B. J. (2012). Accuracy of genomic predictions of residual feed intake and 250-day body weight in growing heifers using 625,000 single nucleotide polymorphism markers. Journal of Dairy Science, 95 (4), 2108-2119. doi: 10.3168/jds.2011-4628 |
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2012 Journal Article Design of a bovine low-density snp array optimized for imputationBoichard, Didier, Chung, Hoyoung, Dassonneville, Romain, David, Xavier, Eggen, Andre, Fritz, Sebastien, Gietzen, Kimberly J., Hayes, Ben J., Lawley, Cynthia T., Sonstegard, Tad S., Van Tassell, Curtis P., VanRaden, Paul M., Viaud-Martinez, Karine A. and Wiggans, George R. (2012). Design of a bovine low-density snp array optimized for imputation. PLoS One, 7 (3) e34130, e34130. doi: 10.1371/journal.pone.0034130 |
