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2017 Journal Article Detection and validation of structural variations in bovine whole-genome sequence dataChen, Long, Chamberlain, Amanda J., Reich, Coralie M., Daetwyler, Hans D. and Hayes, Ben J. (2017). Detection and validation of structural variations in bovine whole-genome sequence data. Genetics Selection Evolution, 49 (1) 13. doi: 10.1186/s12711-017-0286-5 |
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2017 Journal Article Corrigendum: Genomic selection improves heat tolerance in dairy cattleGarner, J. B., Douglas, M. L., Williams, S. R. O., Wales, W. J., Marett, L. C., Nguyen, T. T. T., Reich, C. M. and Hayes, B. J. (2017). Corrigendum: Genomic selection improves heat tolerance in dairy cattle. Scientific Reports, 7 (1) 39896, 39896. doi: 10.1038/srep39896 |
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2017 Journal Article A practical future-scenarios selection tool to breed for heat tolerance in Australian dairy cattleNguyen, Thuy T. T., Hayes, Ben J. and Pryce, Jennie E. (2017). A practical future-scenarios selection tool to breed for heat tolerance in Australian dairy cattle. Animal Production Science, 57 (7), 1488-1493. doi: 10.1071/AN16449 |
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2017 Journal Article Optimizing resource allocation in a genomic breeding program for perennial ryegrass to balance genetic gain, cost, and inbreedingLin, Zibei, Wang, Junping, Cogan, Noel O. I., Pembleton, Luke W., Badenhorst, Pieter, Forster, John W., Spangenberg, German C., Hayes, Ben J. and Daetwyler, Hans D. (2017). Optimizing resource allocation in a genomic breeding program for perennial ryegrass to balance genetic gain, cost, and inbreeding. Crop Science, 57 (1), 243-252. doi: 10.2135/cropsci2016.07.0577 |
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2017 Journal Article Responses of dairy cows to short-term heat stress in controlled-climate chambersGarner, J. B., Douglas, M., Williams, S. R. O., Wales, W. J., Marett, L. C., DiGiacomo, K., Leury, B. J. and Hayes, B. J. (2017). Responses of dairy cows to short-term heat stress in controlled-climate chambers. Animal Production Science, 57 (7), 1233-1241. doi: 10.1071/AN16472 |
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2016 Journal Article Leveraging genetically simple traits to identify small-effect variants for complex phenotypesKemper, K. E., Littlejohn, M. D., Lopdell, T., Hayes, B. J., Bennett, L. E., Williams, R. P., Xu, X. Q., Visscher, P. M., Carrick, M. J. and Goddard, M. E. (2016). Leveraging genetically simple traits to identify small-effect variants for complex phenotypes. BMC Genomics, 17 (1) 858, 858. doi: 10.1186/s12864-016-3175-3 |
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2016 Journal Article Improving genetic gain with genomic selection in autotetraploid potatoSlater, Anthony T., Cogan, Noel O. I., Forster, John W., Hayes, Benjamin J. and Daetwyler, Hans D. (2016). Improving genetic gain with genomic selection in autotetraploid potato. Plant Genome, 9 (3) plantgenome2016.02.0021, plantgenome2016.02.0021-15. doi: 10.3835/plantgenome2016.02.0021 |
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2016 Journal Article GO-FAANG meeting: a gathering on functional annotation of animal genomesTuggle, Christopher K., Giuffra, Elisabetta, White, Stephen N., Clarke, Laura, Zhou, Huaijun, Ross, Pablo J., Acloque, Herve, Reecy, James M., Archibald, Alan, Bellone, Rebecca R., Boichard, Michele, Chamberlain, Amanda, Cheng, Hans, Crooijmans, Richard P. M. A., Delany, Mary E., Finno, Carrie J., Groenen, Martien A. M., Hayes, Ben, Lunney, Joan K., Petersen, Jessica L., Plastow, Graham S., Schmidt, Carl J., Song, Jiuzhou and Watson, Mick (2016). GO-FAANG meeting: a gathering on functional annotation of animal genomes. Animal Genetics, 47 (5), 528-533. doi: 10.1111/age.12466 |
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2016 Journal Article Genomewide association study of methane emissions in Angus beef cattle with validation in dairy cattleManzanilla-Pech, C. I. V., De Haas, Y., Hayes, B. J., Veerkamp, R. F., Khansefid, M., Donoghue, K. A., Arthur, P. F. and Pryce, J. E. (2016). Genomewide association study of methane emissions in Angus beef cattle with validation in dairy cattle. Journal of Animal Science, 94 (10), 4151-4166. doi: 10.2527/jas.2016-0431 |
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2016 Journal Article A hybrid expectation maximisation and MCMC sampling algorithm to implement Bayesian mixture model based genomic prediction and QTL mappingWang, Tingting, Chen, Yi-Ping Phoebe, Bowman, Phil J., Goddard, Michael E. and Hayes, Ben J. (2016). A hybrid expectation maximisation and MCMC sampling algorithm to implement Bayesian mixture model based genomic prediction and QTL mapping. BMC Genomics, 17 (1) 744, 744. doi: 10.1186/s12864-016-3082-7 |
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2016 Journal Article Models for genome x environment interaction: examples in livestockHayes, Ben J., Daetwyler, Hans D. and Goddard, Mike E. (2016). Models for genome x environment interaction: examples in livestock. Crop Science, 56 (5), 2251-2259. doi: 10.2135/cropsci2015.07.0451 |
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2016 Journal Article Genomic selection improves heat tolerance in dairy cattleGarner, J. B., Douglas, M. L., Williams, S. R. O., Wales, W. J., Marett, L. C., Nguyen, T. T. T., Reich, C. M. and Hayes, B. J. (2016). Genomic selection improves heat tolerance in dairy cattle. Scientific Reports, 6 (1) 34114, 34114. doi: 10.1038/srep34114 |
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2016 Journal Article Genetics of complex traits: prediction of phenotype, identification of causal polymorphisms and genetic architectureGoddard, M. E., Kemper, K. E., MacLeod, I. M., Chamberlain, A. J. and Hayes, B. J. (2016). Genetics of complex traits: prediction of phenotype, identification of causal polymorphisms and genetic architecture. Proceedings of the Royal Society B: Biological Sciences, 283 (1835) 20160569, 20160569. doi: 10.1098/rspb.2016.0569 |
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2016 Journal Article Polyceraty (multi-horns) in Damara sheep maps to ovine chromosome 2Greyvenstein, O. F. C., Reich, C. M., van Marle-Koster, E., Riley, D. G. and Hayes, B. J. (2016). Polyceraty (multi-horns) in Damara sheep maps to ovine chromosome 2. Animal Genetics, 47 (2), 263-266. doi: 10.1111/age.12411 |
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2016 Journal Article Genomic selection for tolerance to heat stress in Australian dairy cattleNguyen, Thuy T. T., Bowman, Phil J., Haile-Mariam, Mekonnen, Pryce, Jennie E. and Hayes, Benjamin J. (2016). Genomic selection for tolerance to heat stress in Australian dairy cattle. Journal of Dairy Science, 99 (4), 2849-2862. doi: 10.3168/jds.2015-9685 |
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2016 Journal Article Detailed phenotyping identifies genes with pleiotropic effects on body compositionBolormaa, Sunduimijid, Hayes, Ben J., van der Werf, Julius H. J., Pethick, David, Goddard, Michael E. and Daetwyler, Hans D. (2016). Detailed phenotyping identifies genes with pleiotropic effects on body composition. BMC Genomics, 17 (224) 224, 1-21. doi: 10.1186/s12864-016-2538-0 |
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2016 Journal Article Genomic heritabilities and genomic estimated breeding values for methane traits in Angus cattleHayes, B. J., Donoghue, K. A., Reich, C. M., Mason, B. A., Bird-Gardiner, T., Herd, R. M. and Arthur, P. F. (2016). Genomic heritabilities and genomic estimated breeding values for methane traits in Angus cattle. Journal of Animal Science, 94 (3), 902-908. doi: 10.2527/jas2015-0078 |
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2016 Journal Article Genetic gain and inbreeding from genomic selection in a simulated commercial breeding program for perennial ryegrassLin, Zibei, Cogan, Noel O. I., Pembleton, Luke W., Spangenberg, German C., Forster, John W., Hayes, Ben J. and Daetwyler, Hans D. (2016). Genetic gain and inbreeding from genomic selection in a simulated commercial breeding program for perennial ryegrass. Plant Genome, 9 (1) plantgenome2015.06.0046, 876-883. doi: 10.3835/plantgenome2015.06.0046 |
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2016 Journal Article Technical note: equivalent genomic models with a residual polygenic effectLiu, Z., Goddard, M. E., Hayes, B. J., Reinhardt, F. and Reents, R. (2016). Technical note: equivalent genomic models with a residual polygenic effect. Journal of Dairy Science, 99 (3), 2016-2025. doi: 10.3168/jds.2015-10394 |
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2016 Journal Article Targeted imputation of sequence variants and gene expression profiling identifies twelve candidate genes associated with lactation volume, composition and calving interval in dairy cattleRaven, Lesley-Ann, Cocks, Benjamin G., Kemper, Kathryn E., Chamberlain, Amanda J., Vander Jagt, Christy J., Goddard, Michael E. and Hayes, Ben J. (2016). Targeted imputation of sequence variants and gene expression profiling identifies twelve candidate genes associated with lactation volume, composition and calving interval in dairy cattle. Mammalian Genome, 27 (1-2), 81-97. doi: 10.1007/s00335-015-9613-8 |
