|
2017 Journal Article Putative enhancer sites in the bovine genome are enriched with variants affecting complex traitsWang, Min, Hancock, Timothy P., MacLeod, Iona M., Pryce, Jennie E., Cocks, Benjamin G. and Hayes, Benjamin J. (2017). Putative enhancer sites in the bovine genome are enriched with variants affecting complex traits. Genetics Selection Evolution, 49 (1) 56. doi: 10.1186/s12711-017-0331-4 |
|
2017 Journal Article Detection and assessment of copy number variation using PacBio long-read and Illumina sequencing in New Zealand dairy cattleCouldrey, C., Keehan, M., Johnson, T., Tiplady, K., Winkelman, A., Littlejohn, M. D., Scott, A., Kemper, K. E., Hayes, B., Davis, S. R. and Spelman, R. J. (2017). Detection and assessment of copy number variation using PacBio long-read and Illumina sequencing in New Zealand dairy cattle. Journal of Dairy Science, 100 (7), 5472-5478. doi: 10.3168/jds.2016-12199 |
|
2017 Journal Article Exome sequence genotype imputation in globally diverse hexaploid wheat accessionsShi, Fan, Tibbits, Josquin, Pasam, Raj K., Kay, Pippa, Wong, Debbie, Petkowski, Joanna, Forrest, Kerrie L., Hayes, Ben J., Akhunova, Alina, Davies, John, Webb, Steven, Spangenberg, German C., Akhunov, Eduard, Hayden, Matthew J. and Daetwyler, Hans D. (2017). Exome sequence genotype imputation in globally diverse hexaploid wheat accessions. Theoretical and Applied Genetics, 130 (7), 1393-1404. doi: 10.1007/s00122-017-2895-3 |
|
2017 Journal Article Genomic prediction of reproduction traits for Merino sheepBolormaa, S., Brown, D. J., Swan, A. A., van der Werf, J. H. J., Hayes, B. J. and Daetwyler, H. D. (2017). Genomic prediction of reproduction traits for Merino sheep. Animal Genetics, 48 (3), 338-348. doi: 10.1111/age.12541 |
|
2017 Journal Article Mitigation of inbreeding while preserving genetic gain in genomic breeding programs for outbred plantsLin, Zibei, Shi, Fan, Hayes, Ben J. and Daetwyler, Hans D. (2017). Mitigation of inbreeding while preserving genetic gain in genomic breeding programs for outbred plants. Theoretical and Applied Genetics, 130 (5), 969-980. doi: 10.1007/s00122-017-2863-y |
|
2017 Journal Article Evaluating the ability of a lifetime nutrient-partitioning model for simulating the performance of Australian Holstein dairy cowsPhuong, H. N., Friggens, N. C., Martin, O., Blavy, P., Hayes, B. J., Wales, W. J. and Pryce, J. E. (2017). Evaluating the ability of a lifetime nutrient-partitioning model for simulating the performance of Australian Holstein dairy cows. Animal Production Science, 57 (7), 1563-1568. doi: 10.1071/AN16452 |
|
2017 Journal Article Partitioning of energy and nitrogen in lactating primiparous and multiparous Holstein-Friesian cows with divergent residual feed intakeMarett, L. C., Williams, S. R. O., Hayes, B. J., Pryce, J. E. and Wales, W. J. (2017). Partitioning of energy and nitrogen in lactating primiparous and multiparous Holstein-Friesian cows with divergent residual feed intake. Animal Production Science, 57 (7), 1499-1506. doi: 10.1071/AN16476 |
|
2017 Journal Article Including nonadditive genetic effects in mating programs to maximize dairy farm profitabilityAliloo, H., Pryce, J. E., Gonzalez-Recio, O., Cocks, B. G., Goddard, M. E. and Hayes, B. J. (2017). Including nonadditive genetic effects in mating programs to maximize dairy farm profitability. Journal of Dairy Science, 100 (2), 1203-1222. doi: 10.3168/jds.2016-11261 |
|
2017 Journal Article Detection and validation of structural variations in bovine whole-genome sequence dataChen, Long, Chamberlain, Amanda J., Reich, Coralie M., Daetwyler, Hans D. and Hayes, Ben J. (2017). Detection and validation of structural variations in bovine whole-genome sequence data. Genetics Selection Evolution, 49 (1) 13. doi: 10.1186/s12711-017-0286-5 |
|
2017 Journal Article Corrigendum: Genomic selection improves heat tolerance in dairy cattleGarner, J. B., Douglas, M. L., Williams, S. R. O., Wales, W. J., Marett, L. C., Nguyen, T. T. T., Reich, C. M. and Hayes, B. J. (2017). Corrigendum: Genomic selection improves heat tolerance in dairy cattle. Scientific Reports, 7 (1) 39896, 39896. doi: 10.1038/srep39896 |
|
2017 Journal Article Responses of dairy cows to short-term heat stress in controlled-climate chambersGarner, J. B., Douglas, M., Williams, S. R. O., Wales, W. J., Marett, L. C., DiGiacomo, K., Leury, B. J. and Hayes, B. J. (2017). Responses of dairy cows to short-term heat stress in controlled-climate chambers. Animal Production Science, 57 (7), 1233-1241. doi: 10.1071/AN16472 |
|
Featured 2017 Conference Publication Indirect prediction of macadamia yield through a genome wide association study of component traitsO'Connor, Katie, Hayes, Ben, Hardner, Craig, Mobashwer Alam and Topp, Bruce (2017). Indirect prediction of macadamia yield through a genome wide association study of component traits. International Macadamia Research Symposium, Hawaii, United States, 13-14 September 2017. |
|
2017 Journal Article A practical future-scenarios selection tool to breed for heat tolerance in Australian dairy cattleNguyen, Thuy T. T., Hayes, Ben J. and Pryce, Jennie E. (2017). A practical future-scenarios selection tool to breed for heat tolerance in Australian dairy cattle. Animal Production Science, 57 (7), 1488-1493. doi: 10.1071/AN16449 |
|
2017 Journal Article Optimizing resource allocation in a genomic breeding program for perennial ryegrass to balance genetic gain, cost, and inbreedingLin, Zibei, Wang, Junping, Cogan, Noel O. I., Pembleton, Luke W., Badenhorst, Pieter, Forster, John W., Spangenberg, German C., Hayes, Ben J. and Daetwyler, Hans D. (2017). Optimizing resource allocation in a genomic breeding program for perennial ryegrass to balance genetic gain, cost, and inbreeding. Crop Science, 57 (1), 243-252. doi: 10.2135/cropsci2016.07.0577 |
|
2016 Journal Article Leveraging genetically simple traits to identify small-effect variants for complex phenotypesKemper, K. E., Littlejohn, M. D., Lopdell, T., Hayes, B. J., Bennett, L. E., Williams, R. P., Xu, X. Q., Visscher, P. M., Carrick, M. J. and Goddard, M. E. (2016). Leveraging genetically simple traits to identify small-effect variants for complex phenotypes. BMC Genomics, 17 (1) 858, 858. doi: 10.1186/s12864-016-3175-3 |
|
2016 Journal Article Improving genetic gain with genomic selection in autotetraploid potatoSlater, Anthony T., Cogan, Noel O. I., Forster, John W., Hayes, Benjamin J. and Daetwyler, Hans D. (2016). Improving genetic gain with genomic selection in autotetraploid potato. Plant Genome, 9 (3), plantgenome2016.02.0021-15. doi: 10.3835/plantgenome2016.02.0021 |
|
2016 Journal Article GO-FAANG meeting: a gathering on functional annotation of animal genomesTuggle, Christopher K., Giuffra, Elisabetta, White, Stephen N., Clarke, Laura, Zhou, Huaijun, Ross, Pablo J., Acloque, Herve, Reecy, James M., Archibald, Alan, Bellone, Rebecca R., Boichard, Michele, Chamberlain, Amanda, Cheng, Hans, Crooijmans, Richard P. M. A., Delany, Mary E., Finno, Carrie J., Groenen, Martien A. M., Hayes, Ben, Lunney, Joan K., Petersen, Jessica L., Plastow, Graham S., Schmidt, Carl J., Song, Jiuzhou and Watson, Mick (2016). GO-FAANG meeting: a gathering on functional annotation of animal genomes. Animal Genetics, 47 (5), 528-533. doi: 10.1111/age.12466 |
|
2016 Journal Article Genomewide association study of methane emissions in Angus beef cattle with validation in dairy cattleManzanilla-Pech, C. I. V., De Haas, Y., Hayes, B. J., Veerkamp, R. F., Khansefid, M., Donoghue, K. A., Arthur, P. F. and Pryce, J. E. (2016). Genomewide association study of methane emissions in Angus beef cattle with validation in dairy cattle. Journal of Animal Science, 94 (10), 4151-4166. doi: 10.2527/jas.2016-0431 |
|
2016 Journal Article A hybrid expectation maximisation and MCMC sampling algorithm to implement Bayesian mixture model based genomic prediction and QTL mappingWang, Tingting, Chen, Yi-Ping Phoebe, Bowman, Phil J., Goddard, Michael E. and Hayes, Ben J. (2016). A hybrid expectation maximisation and MCMC sampling algorithm to implement Bayesian mixture model based genomic prediction and QTL mapping. BMC Genomics, 17 (1) 744, 744. doi: 10.1186/s12864-016-3082-7 |
|
2016 Journal Article Models for genome x environment interaction: examples in livestockHayes, Ben J., Daetwyler, Hans D. and Goddard, Mike E. (2016). Models for genome x environment interaction: examples in livestock. Crop Science, 56 (5), 2251-2259. doi: 10.2135/cropsci2015.07.0451 |
