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2025 Journal Article Myosin 1f and Proline-rich 13 are transcriptionally upregulated yet functionally redundant in CD4+ T cells during blood-stage Plasmodium infectionAsatsuma, Takahiro, Moreira, Marcela L., Lee, Hyun J., Wanrooy, Brooke J., Skinner, Oliver P., Li, Shihan, Rea, Ivana, Harkin, Taidhgin, Asad, Saba, Williams, Cameron G., Beattie, Lynette and Haque, Ashraful (2025). Myosin 1f and Proline-rich 13 are transcriptionally upregulated yet functionally redundant in CD4+ T cells during blood-stage Plasmodium infection. PLos One, 20 (3) e0320375. doi: 10.1371/journal.pone.0320375 |
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2024 Journal Article CD4+ T cells display a spectrum of recall dynamics during re-infection with malaria parasitesLee, Hyun Jae, Moreira, Marcela L., Li, Shihan, Asatsuma, Takahiro, Williams, Cameron G., Skinner, Oliver P., Asad, Saba, Bramhall, Michael, Jiang, Zhe, Liu, Zihan, Kerr, Ashlyn S., Engel, Jessica A., Soon, Megan S. F., Straube, Jasmin, Barrera, Irving, Murray, Evan, Chen, Fei, Nideffer, Jason, Jagannathan, Prasanna and Haque, Ashraful (2024). CD4+ T cells display a spectrum of recall dynamics during re-infection with malaria parasites. Nature Communications, 15 (1) 5497, 1-18. doi: 10.1038/s41467-024-49879-6 |
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2024 Journal Article Plasmodium infection induces phenotypic, clonal, and spatial diversity among differentiating CD4+ T cells (vol 43, 114317, 2024)Williams, Cameron G., Moreira, Marcela L., Asatsuma, Takahiro, Lee, Hyun Jae, Li, Shihan, Burn, Thomas N., Barrera, Irving, Murray, Evan, Soon, Megan S. F., Engel, Jessica A., Khoury, David S., Le, Shirley, Wanrooy, Brooke J., Schienstock, Dominick, Alexandre, Yannick O., Skinner, Oliver P., Joseph, Rainon, Beattie, Lynette, Mueller, Scott N., Chen, Fei and Haque, Ashraful (2024). Plasmodium infection induces phenotypic, clonal, and spatial diversity among differentiating CD4+ T cells (vol 43, 114317, 2024). Cell Reports, 43 (9) 114754. doi: 10.1016/j.celrep.2024.114754 |
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2024 Journal Article Plasmodium infection induces phenotypic, clonal, and spatial diversity among differentiating CD4+T cellsWilliams, Cameron G., Moreira, Marcela L., Asatsuma, Takahiro, Lee, Hyun Jae, Li, Shihan, Barrera, Irving, Murray, Evan, Soon, Megan S. F., Engel, Jessica A., Khoury, David S., Le, Shirley, Wanrooy, Brooke J., Schienstock, Dominick, Alexandre, Yannick O., Skinner, Oliver P., Joseph, Rainon, Beattie, Lynette, Mueller, Scott N., Chen, Fei and Haque, Ashraful (2024). Plasmodium infection induces phenotypic, clonal, and spatial diversity among differentiating CD4+T cells. Cell Reports, 43 (6) 114317, 1-28. doi: 10.1016/j.celrep.2024.114317 |
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2023 Journal Article Systemic host inflammation induces stage-specific transcriptomic modification and slower maturation in malaria parasitesLansink, Lianne I. M., Skinner, Oliver P., Engel, Jessica A., Lee, Hyun Jae, Soon, Megan S. F., Williams, Cameron G., SheelaNair, Arya, Pernold, Clara P. S., Laohamonthonkul, Pawat, Akter, Jasmin, Stoll, Thomas, Hill, Michelle M., Talman, Arthur M., Russell, Andrew, Lawniczak, Mara, Jia, Xiaoxiao, Chua, Brendon, Anderson, Dovile, Creek, Darren J., Davenport, Miles P., Khoury, David S. and Haque, Ashraful (2023). Systemic host inflammation induces stage-specific transcriptomic modification and slower maturation in malaria parasites. mBio, 14 (4). doi: 10.1128/mbio.01129-23 |
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2022 Journal Article An introduction to spatial transcriptomics for biomedical researchWilliams, Cameron G., Lee, Hyun Jae, Asatsuma, Takahiro, Vento-Tormo, Roser and Haque, Ashraful (2022). An introduction to spatial transcriptomics for biomedical research. Genome Medicine, 14 (1) 68, 1-18. doi: 10.1186/s13073-022-01075-1 |
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2022 Journal Article A diverse fibroblastic stromal cell landscape in the spleen directs tissue homeostasis and immunityAlexandre, Yannick O., Schienstock, Dominik, Lee, Hyun Jae, Gandolfo, Luke C., Williams, Cameron G., Devi, Sapna, Pal, Bhupinder, Groom, Joanna R., Cao, Wang, Christo, Susan N., Gordon, Claire L., Starkey, Graham, D’Costa, Rohit, Mackay, Laura K., Haque, Ashraful, Ludewig, Burkhard, Belz, Gabrielle T. and Mueller, Scott N. (2022). A diverse fibroblastic stromal cell landscape in the spleen directs tissue homeostasis and immunity. Science Immunology, 7 (67) eabj0641, eabj0641. doi: 10.1126/sciimmunol.abj0641 |
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2021 Journal Article Francisella tularensis induces Th1 like MAIT cells conferring protection against systemic and local infectionZhao, Zhe, Wang, Huimeng, Shi, Mai, Zhu, Tianyuan, Pediongco, Troi, Lim, Xin Yi, Meehan, Bronwyn S., Nelson, Adam G., Fairlie, David P., Mak, Jeffrey Y. W., Eckle, Sidonia B. G., de Lima Moreira, Marcela, Tumpach, Carolin, Bramhall, Michael, Williams, Cameron G., Lee, Hyun Jae, Haque, Ashraful, Evrard, Maximilien, Rossjohn, Jamie, McCluskey, James, Corbett, Alexandra J. and Chen, Zhenjun (2021). Francisella tularensis induces Th1 like MAIT cells conferring protection against systemic and local infection. Nature Communications, 12 (1) 4355, 1-15. doi: 10.1038/s41467-021-24570-2 |
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2021 Conference Publication Exposure to host inflammation in vivo induces rapid transcriptomic change and impaired maturation in malaria parasitesLansink, Lianne I. M., Engel, Jessica A., Lee, Hyun Jae, Soon, Megan S. F., Williams, Cameron G., Aogo, Rosemary A., Cromer, Deborah, Davenport, Miles P., Khoury, David S. and Haque, Ashraful (2021). Exposure to host inflammation in vivo induces rapid transcriptomic change and impaired maturation in malaria parasites. Immunology 2021™ Meeting, Virtual, 10-15 May 2021. Cary, NC USA: Oxford University Press. doi: 10.4049/jimmunol.206.Supp.99.22 |
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2021 Conference Publication Studying lymphocyte differentiation in the spleen via spatial transcriptomicsWilliams, Cameron Gerard, Engel, Jessica A., Soon, Megan S. F., Murray, Evan, Chen, Fei and Haque, Ashraful (2021). Studying lymphocyte differentiation in the spleen via spatial transcriptomics. Immunology 2021™ Meeting, Virtual, 10-15 May 2021. Cambridge, United Kingdom: Oxford University Press. doi: 10.4049/jimmunol.206.Supp.98.55 |
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2020 Journal Article Single-cell transcriptomics of alloreactive CD4+ T cells over time reveals divergent fates during gut graft-versus-host diseaseEngel, Jessica A., Lee, Hyun Jae, Williams, Cameron G., Kuns, Rachel, Olver, Stuart, Lansink, Lianne Im, Soon, Megan Sf, Andersen, Stacey B., Powell, Joseph E., Svensson, Valentine, Teichmann, Sarah A., Hill, Geoffrey R., Varelias, Antiopi, Koyama, Motoko and Haque, Ashraful (2020). Single-cell transcriptomics of alloreactive CD4+ T cells over time reveals divergent fates during gut graft-versus-host disease. JCI Insight, 5 (13) 137990, 1-19. doi: 10.1172/jci.insight.137990 |
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2020 Journal Article Transcriptome dynamics of CD4+ T cells during malaria maps gradual transit from effector to memorySoon, Megan S. F., Lee, Hyun Jae, Engel, Jessica A., Straube, Jasmin, Thomas, Bryce S., Pernold, Clara P. S., Clarke, Lachlan S., Laohamonthonkul, Pawat, Haldar, Rohit N., Williams, Cameron G., Lansink, Lianne I. M., Moreira, Marcela L., Bramhall, Michael, Koufariotis, Lambros T., Wood, Scott, Chen, Xi, James, Kylie R., Lönnberg, Tapio, Lane, Steven W., Belz, Gabrielle T., Engwerda, Christian R., Khoury, David S., Davenport, Miles P., Svensson, Valentine, Teichmann, Sarah A. and Haque, Ashraful (2020). Transcriptome dynamics of CD4+ T cells during malaria maps gradual transit from effector to memory. Nature Immunology, 21 (12), 1597-1610. doi: 10.1038/s41590-020-0800-8 |
