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2019 Journal Article Infection and nuclear interaction in mammalian cells by "Candidatus Berkiella cookevillensis', a novel bacterium isolated from amoebaeChamberlain, Nicholas B., Mehari, Yohannes T., Hayes, B. Jason, Roden, Colleen M., Kidane, Destaalem T., Swehla, Andrew J., Lorenzana-DeWitt, Mario A., Farone, Anthony L., Gunderson, John H., Berk, Sharon G. and Farone, Mary B. (2019). Infection and nuclear interaction in mammalian cells by "Candidatus Berkiella cookevillensis', a novel bacterium isolated from amoebae. BMC Microbiology, 19 (1) 91, 1-18. doi: 10.1186/s12866-019-1457-z |
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2019 Journal Article Exome sequencing highlights the role of wild-relative introgression in shaping the adaptive landscape of the wheat genomeHe, Fei, Pasam, Raj, Shi, Fan, Kant, Surya, Keeble-Gagnere, Gabriel, Kay, Pippa, Forrest, Kerrie, Fritz, Allan, Hucl, Pierre, Wiebe, Krystalee, Knox, Ron, Cuthbert, Richard, Pozniak, Curtis, Akhunova, Alina, Morrell, Peter L., Davies, John P., Webb, Steve R., Spangenberg, German, Hayes, Ben, Daetwyler, Hans, Tibbits, Josquin, Hayden, Matthew and Akhunov, Eduard (2019). Exome sequencing highlights the role of wild-relative introgression in shaping the adaptive landscape of the wheat genome. Nature Genetics, 51 (5), 896-904. doi: 10.1038/s41588-019-0382-2 |
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2019 Journal Article Overlap between eQTL and QTL associated with production traits and fertility in dairy cattleVan Den Berg, I., Hayes, B. J., Chamberlain, A. J. and Goddard, M. E. (2019). Overlap between eQTL and QTL associated with production traits and fertility in dairy cattle. BMC Genomics, 20 (1) 291, 291. doi: 10.1186/s12864-019-5656-7 |
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2019 Journal Article Population structure, genetic diversity and linkage disequilibrium in a macadamia breeding population using SNP and silicoDArT markersO’Connor, Katie, Kilian, Andrzej, Hayes, Ben, Hardner, Craig, Nock, Catherine, Baten, Abdul, Alam, Mobashwer and Topp, Bruce (2019). Population structure, genetic diversity and linkage disequilibrium in a macadamia breeding population using SNP and silicoDArT markers. Tree Genetics & Genomes, 15 (2) 24, 24. doi: 10.1007/s11295-019-1331-z |
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2019 Journal Article Complex trait prediction from genome data: contrasting EBV in livestock to PRS in humans: genomic predictionWray, Naomi R., Kemper, Kathryn E., Hayes, Benjamin J., Goddard, Michael E. and Visscher, Peter M. (2019). Complex trait prediction from genome data: contrasting EBV in livestock to PRS in humans: genomic prediction. Genetics, 211 (4), 1131-1141. doi: 10.1534/genetics.119.301859 |
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2019 Journal Article Selecting for nut characteristics in macadamia using a genome-wide association studyO’Connor, Katie, Hayes, Ben, Hardner, Craig, Alam, Mobashwer and Topp, Bruce (2019). Selecting for nut characteristics in macadamia using a genome-wide association study. HortScience, 54 (4), 629-632. doi: 10.21273/hortsci13297-18 |
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2019 Journal Article 1000 Bull Genomes Project to map simple and complex genetic traits in cattle: applications and outcomesHayes, Ben J. and Daetwyler, Hans D. (2019). 1000 Bull Genomes Project to map simple and complex genetic traits in cattle: applications and outcomes. Annual Review of Animal Biosciences, 7 (1), 89-102. doi: 10.1146/annurev-animal-020518-115024 |
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2019 Journal Article Fine-mapping sequence mutations with a major effect on oligosaccharide content in bovine milkLiu, Zhiqian, Wang, Tingting, Pryce, Jennie E., MacLeod, Iona M., Hayes, Ben J., Chamberlain, Amanda J., Jagt, Christy Vander, Reich, Coralie M., Mason, Brett A., Rochfort, Simone and Cocks, Benjamin G. (2019). Fine-mapping sequence mutations with a major effect on oligosaccharide content in bovine milk. Scientific Reports, 9 (1) 2137, 2137. doi: 10.1038/s41598-019-38488-9 |
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2019 Other Outputs SNP and phenotype data, and GWAS results for macadamia breeding progeny populationO'Connor, Katie, Hayes, Ben, Hardner, Craig, Alam, Mobashwer and Topp, Bruce (2019). SNP and phenotype data, and GWAS results for macadamia breeding progeny population. The University of Queensland. (Dataset) doi: 10.14264/uql.2019.808 |
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2019 Journal Article Towards multi-breed genomic evaluations for female fertility of tropical beef cattleHayes, Ben J., Corbet, Nicholas J., Allen, Jack M., Laing, Alan R., Fordyce, Geoffry, Lyons, Russel, McGowan, Michael R. and Burns, Brian M. (2019). Towards multi-breed genomic evaluations for female fertility of tropical beef cattle. Journal of Animal Science, 97 (1), 55-62. doi: 10.1093/jas/sky417 |
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2019 Journal Article Towards a new phenotype for tick resistance in beef and dairy cattle: a reviewBurrow, Heather M., Mans, Ben J., Cardoso, Fernando F., Birkett, Michael A., Kotze, Andrew C., Hayes, Ben J., Mapholi, Ntanganedzeni, Dzama, Kennedy, Marufu, Munyaradzi C., Githaka, Naftaly W. and Djikeng, Appolinaire (2019). Towards a new phenotype for tick resistance in beef and dairy cattle: a review. Animal Production Science, 59 (8), 1401-1427. doi: 10.1071/AN18487 |
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2019 Conference Publication Poll testing efficiency, accuracy and trends in Australian cattleRandhawa, I.A.S., McGowan, M.R., Porto-Neto, L.R., Hayes, B.J., Schutt, K.M. and Lyons, R.E. (2019). Poll testing efficiency, accuracy and trends in Australian cattle. Association for the Advancement in Animal Breeding Genetics, Armidale, Australia, 27 October - 1 November 2019. |
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2019 Conference Publication DNA testing and genetic evaluation for poll breeding in tropically adapted beef cattleRandhawa, I. A. S, Hayes, B. J., McGowan, M. R., Porto-Neto, L. R. and Lyons, R. E. (2019). DNA testing and genetic evaluation for poll breeding in tropically adapted beef cattle. International Tropical Agriculture Conference (TROPAG2019), Brisbane, QLD Australia, 11-13 November 2019. Basel, Switzerland: MDPI. doi: 10.3390/proceedings2019036098 |
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2019 Conference Publication Poll diagnostics, scur genetics and production concurrence in naturally hornless cattleRandhawa, I. A. S., McGowan, M. R., Porto-Neto, L. R., Hayes, B. J. and Lyons, R. E. (2019). Poll diagnostics, scur genetics and production concurrence in naturally hornless cattle. 37th International Society for Animal Genetics (ISAG) Conference, Lleida, Spain, 7-12 July 2019. |
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2019 Journal Article Multivariate genomic predictions for age at puberty in tropically adapted beef heifersEngle, Bailey N., Corbet, Nicholas J., Allen, Jamie M., Laing, Alan R., Fordyce, Geoffry, McGowan, Michael R., Burns, Brian M., Burns, Brian M. and Hayes, Ben J. (2019). Multivariate genomic predictions for age at puberty in tropically adapted beef heifers. Journal of Animal Science, 97 (1), 90-100. doi: 10.1093/jas/sky428 |
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2019 Conference Publication Environmental characterization facilitate G × E interaction to highlight the role of stay-green traits for genetic gainAmin, Asad, Christopher, Jack, Ababaei, Behnam, Cooper, Mark, Hayes, Ben, Voss-Fels, Kai, Hickey, Lee and Chenu, Karine (2019). Environmental characterization facilitate G × E interaction to highlight the role of stay-green traits for genetic gain. Translational Photosynthesis Conference: Innovations in Agriculture for Food Security (ASPS 2019), Brisbane, QLD, Australia, 30 June - 3 July 2019. |
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2019 Conference Publication Improving poll gene testing in Australian cattleRandhawa, I. A. S., Porto-Neto, L., Hayes, B., McGowan, M., Burns, B. and Lyons, R. (2019). Improving poll gene testing in Australian cattle. RSPCA Australian Animal Welfare Seminar, Canberra, ACT Australia, 22 February 2019. |
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2019 Book Chapter “SpeedGS” to accelerate genetic gain in spring wheatVoss-Fels, Kai P., Herzog, Eva, Dreisigacker, Susanne, Sukumaran, Sivakumar, Watson, Amy, Frisch, Matthias, Hayes, Ben and Hickey, Lee T. (2019). “SpeedGS” to accelerate genetic gain in spring wheat. Applications of genetic and genomic research in cereals. (pp. 303-327) edited by Thomas Miedaner and Viktor Korzun. Amsterdam, Netherlands: Elsevier. doi: 10.1016/b978-0-08-102163-7.00014-4 |
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2019 Journal Article Functional Annotation of Animal Genomes (FAANG): Current Achievements and RoadmapGiuffra, Elisabetta, Tuggle, Christopher K., and the FAANG Consortium, Archibald, Alan L., Acloque, Herve, Chamberlain, Amanda J., Cochrane, Guy, Daetwyler, Hans D., Djebali, Sarah, Eory, Lel, Foissac, Sylvain, Goddard, Michael E., Groenen, Martien A. M., Halstead, Michelle, Harrison, Peter W., Hayes, Benjamin J., Kern, Colin, Khatib, Hasan, Kuo, Richard I., MacHugh, David E., Macleod, Iona M., Madsen, Ole, Reecy, James M., Ross, Pablo J., Watson, Mick, Wells, Jerry M. and Zhou, Huaijun (2019). Functional Annotation of Animal Genomes (FAANG): Current Achievements and Roadmap. Annual Review of Animal Biosciences, Vol 7, 7 (1), 65-88. doi: 10.1146/annurev-animal-020518-114913 |
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2019 Journal Article Prediction of genetic value for sweet cherry fruit maturity among environments using a 6K SNP arrayHardner, Craig M., Hayes, Ben J., Kumar, Satish, Vanderzande, Stijn, Cai, Lichun, Piaskowski, Julia, Quero-Garcia, José, Campoy, José Antonio, Barreneche, Teresa, Giovannini, Daniela, Liverani, Alessandro, Charlot, Gérard, Villamil-Castro, Miguel, Oraguzie, Nnadozie and Peace, Cameron P. (2019). Prediction of genetic value for sweet cherry fruit maturity among environments using a 6K SNP array. Horticulture Research, 6 (1) 6, 6. doi: 10.1038/s41438-018-0081-7 |
