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2022 Journal Article Metabolite-based dietary supplementation in human type 1 diabetes is associated with microbiota and immune modulationBell, Kirstine J., Saad, Sonia, Tillett, Bree J., McGuire, Helen M., Bordbar, Sara, Yap, Yu Anne, Nguyen, Long T., Wilkins, Marc R., Corley, Susan, Brodie, Shannon, Duong, Sussan, Wright, Courtney J., Twigg, Stephen, de St Groth, Barbara Fazekas, Harrison, Leonard C., Mackay, Charles R., Gurzov, Esteban N., Hamilton-Williams, Emma E. and Mariño, Eliana (2022). Metabolite-based dietary supplementation in human type 1 diabetes is associated with microbiota and immune modulation. Microbiome, 10 (1) 9, 9. doi: 10.1186/s40168-021-01193-9 |
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2018 Journal Article Intestinal metaproteomics reveals host-microbiota interactions in subjects at risk for Type 1 DiabetesGavin, Patrick G., Mullaney, Jane A., Loo, Dorothy, Cao, Kim-Anh Lê, Gottlieb, Peter A., Hill, Michelle M., Zipris, Danny and Hamilton-Williams, Emma E. (2018). Intestinal metaproteomics reveals host-microbiota interactions in subjects at risk for Type 1 Diabetes. Diabetes Care, 41 (10), 2178-2186. doi: 10.2337/dc18-0777 |
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2018 Journal Article Type 1 diabetes susceptibility alleles are associated with distinct alterations in the gut microbiotaMullaney, Jane A., Stephens, Juliette E., Costello, Mary-Ellen, Fong, Cai, Geeling, Brooke E., Gavin, Patrick G., Wright, Casey M., Spector, Timothy D., Brown, Matthew A. and Hamilton-Williams, Emma E. (2018). Type 1 diabetes susceptibility alleles are associated with distinct alterations in the gut microbiota. Microbiome, 6 (1) 35, 1-16. doi: 10.1186/s40168-018-0417-4 |
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2024 Journal Article Dietary patterns during pregnancy and maternal and birth outcomes in women with type 1 diabetes: the Environmental Determinants of Islet Autoimmunity (ENDIA) studyThomson, Rebecca L, Brown, James D, Oakey, Helena, Palmer, Kirsten, Ashwood, Pat, Penno, Megan A S, McGorm, Kelly J, Battersby, Rachel, Colman, Peter G, Craig, Maria E, Davis, Elizabeth A, Huynh, Tony, Harrison, Leonard C, Haynes, Aveni, Sinnott, Richard O, Vuillermin, Peter J, Wentworth, John M, Soldatos, Georgia, Couper, Jennifer J, ENDIA Study Group and Hamilton-Williams, Emma (ENDIA Study Group member) (2024). Dietary patterns during pregnancy and maternal and birth outcomes in women with type 1 diabetes: the Environmental Determinants of Islet Autoimmunity (ENDIA) study. Diabetologia, 1-13. doi: 10.1007/s00125-024-06259-5 |
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2024 Journal Article Early dysglycemia is detectable using continuous glucose monitoring in very young children at risk of type 1 diabetesHaynes, Aveni, Tully, Alexandra, Smith, Grant J, Penno, Megan A S, Craig, Maria E, Wentworth, John M, Huynh, Tony, Colman, Peter G, Soldatos, Georgia, Anderson, Amanda J, McGorm, Kelly J, Oakey, Helena, Couper, Jennifer J, Davis, Elizabeth A, ENDIA Study Group and Hamilton-Williams, Emma (ENDIA Study Group member) (2024). Early dysglycemia is detectable using continuous glucose monitoring in very young children at risk of type 1 diabetes. Diabetes Care, 47 (10), 1750-1756. doi: 10.2337/dc24-0540 |
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2024 Journal Article Environmental Determinants of Islet Autoimmunity (ENDIA) longitudinal prospective pregnancy to childhood cohort study of Australian children at risk of type 1 diabetes: parental demographics and birth informationThomson, Rebecca L, Oakey, Helena, Haynes, Aveni, Craig, Maria E, Harrison, Leonard C, Wentworth, John M, Anderson, Amanda, Ashwood, Pat, Barry, Simon, Brittain, Bek, Brown, James D, Colman, Peter G, Davis, Elizabeth A, Hamilton-Williams, Emma, Huynh, Dao, Huynh, Tony, Kim, Ki-Wook, McGorm, Kelly J, Morahan, Grant, Rawlinson, William, Sinnott, Richard O, Soldatos, Georgia, Tye-Din, Jason A, Vuillermin, Peter J, Penno, Megan A S and Couper, Jennifer J (2024). Environmental Determinants of Islet Autoimmunity (ENDIA) longitudinal prospective pregnancy to childhood cohort study of Australian children at risk of type 1 diabetes: parental demographics and birth information. BMJ Open Diabetes Research & Care, 12 (4) e004130, e004130-1. doi: 10.1136/bmjdrc-2024-004130 |
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2024 Journal Article Faecal microbial transfer and complex carbohydrates mediate protection against COPDBudden, Kurtis F, Shukla, Shakti D, Bowerman, Kate L, Vaughan, Annalicia, Gellatly, Shaan L, Wood, David L A, Lachner, Nancy, Idrees, Sobia, Rehman, Saima Firdous, Faiz, Alen, Patel, Vyoma K, Donovan, Chantal, Alemao, Charlotte A, Shen, Sj, Amorim, Nadia, Majumder, Rajib, Vanka, Kanth S, Mason, Jazz, Haw, Tatt Jhong, Tillet, Bree, Fricker, Michael, Keely, Simon, Hansbro, Nicole, Belz, Gabrielle T, Horvat, Jay, Ashhurst, Thomas, van Vreden, Caryn, McGuire, Helen, Fazekas de St Groth, Barbara ... Hansbro, Philip M (2024). Faecal microbial transfer and complex carbohydrates mediate protection against COPD. Gut, 73 (5), gutjnl-2023. doi: 10.1136/gutjnl-2023-330521 |
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2023 Journal Article Protocol for a nested case-control study design for omics investigations in the Environmental Determinants of Islet Autoimmunity cohortOakey, Helena, Giles, Lynne C, Thomson, Rebecca L, Lê Cao, Kim-Anh, Ashwood, Pat, Brown, James D, Knight, Emma J, Barry, Simon C, Craig, Maria E, Colman, Peter G, Davis, Elizabeth A, Hamilton-Williams, Emma E, Harrison, Leonard C, Haynes, Aveni, Kim, Ki Wook, Mallitt, Kylie-Ann, McGorm, Kelly, Morahan, Grant, Rawlinson, William D, Sinnott, Richard O, Soldatos, Georgia, Wentworth, John M, Couper, Jennifer J, Penno, Megan A S and ENDIA Study Group (2023). Protocol for a nested case-control study design for omics investigations in the Environmental Determinants of Islet Autoimmunity cohort. Annals of Medicine, 55 (1) 2198255, 1-12. doi: 10.1080/07853890.2023.2198255 |
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2023 Journal Article A surge in serum mucosal cytokines associated with seroconversion in children at risk for type 1 diabetesHarrison, Leonard C., Bandala-Sanchez, Esther, Oakey, Helena, Colman, Peter G., Watson, Kelly, Kim, Ki Wook, Wu, Roy, Hamilton-Williams, Emma E, Stone, Natalie L., Haynes, Aveni, Thomson, Rebecca L., Vuillermin, Peter J., Soldatos, Georgia, Rawlinson, William D., McGorm, Kelly J., Morahan, Grant, Sinnott, Richard O., Barry, Simon C., Wentworth, John M., Couper, Jennifer J., Penno, Megan As and ENDIA Study Group (2023). A surge in serum mucosal cytokines associated with seroconversion in children at risk for type 1 diabetes. Journal of Diabetes Investigation, 14 (9), 1092-1100. doi: 10.1111/jdi.14031 |
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2023 Journal Article Experiences of caregivers and at-risk children enrolled in a prospective pregnancy-birth cohort study into the causes of type 1 diabetes: the ENDIA StudyMcGorm, Kelly D., Brown, James G., Roberts, Alison, Greenbank, Susan, Brasacchio, Daniella, Sawyer, Alyssa C. P., Oakey, Helena G., Colman, Peter E., Craig, Maria A., Davis, Elizabeth, Soldatos, Georgia L., Thomson, Rebecca M., Wentworth, John J., Couper, Jennifer, Penno, Megan A. S., ENDIA Study Group and Hamilton-Williams, Emma E. (2023). Experiences of caregivers and at-risk children enrolled in a prospective pregnancy-birth cohort study into the causes of type 1 diabetes: the ENDIA Study. Children, 10 (4) ARTN 637, 1-12. doi: 10.3390/children10040637 |
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2023 Journal Article Circulating biomarkers during progression to type 1 diabetes: a systematic reviewBrenu, Ekua W., Harris, Mark and Hamilton-Williams, Emma E. (2023). Circulating biomarkers during progression to type 1 diabetes: a systematic review. Frontiers in Endocrinology, 14 1117076, 1117076. doi: 10.3389/fendo.2023.1117076 |
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2023 Journal Article Islet‐specific CD8+ T cells gain effector function in the gut lymphoid tissues via bystander activation not molecular mimicryOkada, Mirei, Zhang, Vivian, Loaiza Naranjo, Jeniffer D., Tillett, Bree J., Wong, F. Susan, Steptoe, Raymond J., Bergot, Anne‐Sophie and Hamilton‐Williams, Emma E (2023). Islet‐specific CD8+ T cells gain effector function in the gut lymphoid tissues via bystander activation not molecular mimicry. Immunology and Cell Biology, 101 (1), 36-48. doi: 10.1111/imcb.12593 |
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2022 Journal Article Multi-omic interactions in the gut of children at the onset of islet autoimmunityGavin, Patrick G., Kim, Ki Wook, Craig, Maria E., Hill, Michelle M. and Hamilton-Williams, Emma E. (2022). Multi-omic interactions in the gut of children at the onset of islet autoimmunity. Microbiome, 10 (1) 230, 230. doi: 10.1186/s40168-022-01425-6 |
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2022 Journal Article Mental health during late pregnancy and postpartum in mothers with and without type 1 diabetes: The ENDIA studyHall, Madeleine, Oakey, Helena, Penno, Megan A. S., McGorm, Kelly, Anderson, Amanda J., Ashwood, Pat, Colman, Peter G., Craig, Maria E., Davis, Elizabeth A., Harris, Mark, Harrison, Leonard C., Haynes, Aveni, Morbey, Claire, Sinnott, Richard O., Soldatos, Georgia, Vuillermin, Peter J., Wentworth, John M., Thomson, Rebecca L., Couper, Jennifer J., ENDIA Study Group., Barry, Simon C., Craig, Maria E., Colman, Peter G., Couper, Jennifer J., Davis, Elizabeth A., Harris, Mark, Harrison, Leonard C., Haynes, Aveni, Kim, Ki Wook ... Cavenett, Leanne (2022). Mental health during late pregnancy and postpartum in mothers with and without type 1 diabetes: The ENDIA study. Diabetes Care, 45 (5), 1082-1090. doi: 10.2337/dc21-2335 |
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2022 Journal Article Women with type 1 diabetes exhibit a progressive increase in gut Saccharomyces cerevisiae in pregnancy associated with evidence of gut inflammationBandala-Sanchez, Esther, Roth-Schulze, Alexandra J., Oakey, Helena, Penno, Megan A.S., Bediaga, Naiara G., Naselli, Gaetano, Ngui, Katrina M., Smith, Alannah D., Huang, Dexing, Zozaya-Valdes, Enrique, Thomson, Rebecca L., Brown, James D., Vuillermin, Peter J., Barry, Simon C., Craig, Maria E., Rawlinson, William D., Davis, Elizabeth A., Harris, Mark, Soldatos, Georgia, Colman, Peter G., Wentworth, John M., Haynes, Aveni, Morahan, Grant, Sinnott, Richard O., Papenfuss, Anthony T., Couper, Jennifer J., Harrison, Leonard C., on behalf of the ENDIA Study Group and Hamilton-Williams, Emma (2022). Women with type 1 diabetes exhibit a progressive increase in gut Saccharomyces cerevisiae in pregnancy associated with evidence of gut inflammation. Diabetes Research and Clinical Practice, 184 109189, 1-23. doi: 10.1016/j.diabres.2022.109189 |
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2022 Journal Article Tolerance induction by liposomes targeting a single CD8 epitope IGRP in a model of type 1 diabetes is impeded by co-targeting a CD4 islet epitopeBuckle, Irina, Loaiza Naranjo, Jeniffer D., Bergot, Anne-Sophie, Zhang, Vivian, Talekar, Meghna, Steptoe, Raymond J., Thomas, Ranjeny and Hamilton-Williams, Emma E. (2022). Tolerance induction by liposomes targeting a single CD8 epitope IGRP in a model of type 1 diabetes is impeded by co-targeting a CD4 islet epitope. Immunology and Cell Biology, 100 (1), 33-48. doi: 10.1111/imcb.12506 |
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2021 Journal Article Type 1 diabetes in pregnancy is associated with distinct changes in the composition and function of the gut microbiomeRoth-Schulze, Alexandra J., Penno, Megan A. S., Ngui, Katrina M., Oakey, Helena, Bandala-Sanchez, Esther, Smith, Alannah D., Allnutt, Theo R., Thomson, Rebecca L., Vuillermin, Peter J., Craig, Maria E., Rawlinson, William D., Davis, Elizabeth A., Harris, Mark, Soldatos, Georgia, Colman, Peter G., Wentworth, John M., Haynes, Aveni, Barry, Simon C., Sinnott, Richard O., Morahan, Grant, Bediaga, Naiara G., Smyth, Gordon K., Papenfuss, Anthony T., Couper, Jennifer J., Harrison, Leonard C., ENDIA Study Group and Hamilton-Williams, Emma (2021). Type 1 diabetes in pregnancy is associated with distinct changes in the composition and function of the gut microbiome. Microbiome, 9 (1) 167, 167. doi: 10.1186/s40168-021-01104-y |
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2021 Journal Article Acquisition of murine splenic myeloid cells for protein and gene expression profiling by advanced flow cytometry and CITE-seqRødahl, Inga, Gotley, James, Andersen, Stacey B., Yu, Meihua, Mehdi, Ahmed M., Christ, Angelika N., Hamilton-Williams, Emma E., Frazer, Ian H., Lukowski, Samuel W. and Chandra, Janin (2021). Acquisition of murine splenic myeloid cells for protein and gene expression profiling by advanced flow cytometry and CITE-seq. STAR Protocols, 2 (4) 100842, 1-27. doi: 10.1016/j.xpro.2021.100842 |
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2021 Journal Article Queensland Family Cohort: a study protocolBorg, Danielle, Rae, Kym, Fiveash, Corrine, Schagen, Johanna, James-McAlpine, Janelle, Friedlander, Frances, Thurston, Claire, Oliveri, Maria, Harmey, Theresa, Cavanagh, Erika, Edwards, Christopher, Fontanarosa, Davide, Perkins, Tony, de Zubicaray, Greig, Moritz, Karen, Kumar, Sailesh, Clifton, Vicki, Queensland Family Cohort Research Collaborative, Hamilton-Williams, Emma and Bora, Samudragupta (2021). Queensland Family Cohort: a study protocol. BMJ Open, 11 (6) e044463, 1-13. doi: 10.1136/bmjopen-2020-044463 |
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2021 Journal Article Metaproteomic sample preparation methods bias the recovery of host and microbial proteins according to taxa and cellular compartmentGavin, Patrick G., Wong, Justin, Loo, Dorothy, Zipris, Danny, Hill, Michelle M. and Hamilton-Williams, Emma E. (2021). Metaproteomic sample preparation methods bias the recovery of host and microbial proteins according to taxa and cellular compartment. Journal of Proteomics, 240 104219, 104219. doi: 10.1016/j.jprot.2021.104219 |
