Overview
Background
I am a Postdoctoral Research Fellow in the labs of Professor Daniel Watterson and Professor Keith Chappell, specialising in the structure-guided design of vaccines and therapeutics for emerging viral pathogens, with a particular emphasis on flaviviral diseases.
My research journey began with a Bachelor of Science (First Class Honours) in Microbiology from The University of Queensland in 2018. I subsequently undertook a PhD (2019–2023) under the supervision of Professors Daniel Watterson, Keith Chappell, and Paul Young, during which I developed antibody discovery platforms for two innovative viral vaccine technologies — the Molecular Clamp and the ISVac chimeric virus system. Using these platforms, I generated therapeutic candidates for the treatment of dengue, which demonstrated efficacy in animal models of dengue virus infection.
Throughout my candidature, I also contributed to the development of The University of Queensland’s COVID-19 vaccine, which advanced to Phase I clinical trials, as well as to ongoing efforts to refine next-generation Molecular Clamp-stabilised vaccine technologies.
Since 2023, I have continued my work as a Postdoctoral Research Fellow with Professor Watterson, focusing on the structural characterisation of antibody–virus interactions and the development of broad-spectrum therapeutics for flaviviruses. My current research integrates molecular virology, antibody discovery, and cryogenic electron microscopy to elucidate key neutralising antibody epitopes on flaviviruses—primarily Japanese encephalitis virus—and to apply these insights toward the rational design of cross-protective vaccines and antibody-based therapies.
Alongside my ongoing work in the Watterson Laboratory, in 2025 I began working with Professor Keith Chappell as an electron microscopy and antibody discovery expert on the Rapid Response Vaccine Platform project, which leverages The University of Queensland’s proprietary Molecular Clamp technology. In this role, I lead the structural biology component of antigen lead selection, using cryogenic electron microscopy to characterise antigen conformations and assess their suitability for vaccine development. Additionally, I oversee the discovery and characterisation of novel monoclonal antibodies that serve as key reagents for vaccine potency and functional assessments. Through this work, I contribute to advancing a robust and flexible vaccine design pipeline capable of rapidly responding to emerging viral threats.
Availability
- Dr Connor Scott is:
- Available for supervision
- Media expert
Qualifications
- Doctor of Philosophy, The University of Queensland
Research interests
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Structure guided vaccine and therapeutic design
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Antibody and Nanobody discovery
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Cryogenic electron microscopy
Works
Search Professor Connor Scott’s works on UQ eSpace
2025
Journal Article
Tetravalent microprojection-based dengue chimeric virus vaccine raises potent neutralising antibodies in mice
Choo, Jovin J. Y., Mcmillan, Christopher L. D., Scott, Connor A. P., Harrison, Jessica J., Watterson, Daniel, Hall, Roy A., Young, Paul R., Hobson-Peters, Jody and Muller, David A. (2025). Tetravalent microprojection-based dengue chimeric virus vaccine raises potent neutralising antibodies in mice. Npj Vaccines, 10 (1) 245, 245. doi: 10.1038/s41541-025-01297-5
2025
Journal Article
A single residue in the yellow fever virus envelope protein modulates virion architecture and antigenicity
Bibby, Summa, Jung, James, Low, Yu Shang, Amarilla, Alberto A., Newton, Natalee D., Scott, Connor A. P., Balk, Jessica, Ting, Yi Tian, Freney, Morgan E., Liang, Benjamin, Grant, Timothy, Coulibaly, Fasséli, Young, Paul, Hall, Roy A., Hobson-Peters, Jody, Modhiran, Naphak and Watterson, Daniel (2025). A single residue in the yellow fever virus envelope protein modulates virion architecture and antigenicity. Nature Communications, 16 (1) 8449, 8449. doi: 10.1038/s41467-025-63038-5
2023
Journal Article
Structure and antigenicity of divergent Henipavirus fusion glycoproteins
Isaacs, Ariel, Low, Yu Shang, Macauslane, Kyle L., Seitanidou, Joy, Pegg, Cassandra L., Cheung, Stacey T. M., Liang, Benjamin, Scott, Connor A. P., Landsberg, Michael J., Schulz, Benjamin L., Chappell, Keith J., Modhiran, Naphak and Watterson, Daniel (2023). Structure and antigenicity of divergent Henipavirus fusion glycoproteins. Nature Communications, 14 (1) 3577, 1-10. doi: 10.1038/s41467-023-39278-8
2023
Other Outputs
Structure-guided vaccine and therapeutic design for emerging viruses
Scott, Connor (2023). Structure-guided vaccine and therapeutic design for emerging viruses. PhD Thesis, School of Chemistry and Molecular Biosciences, The University of Queensland. doi: 10.14264/39cde19
2022
Journal Article
A platform technology for generating subunit vaccines against diverse viral pathogens
Young, Andrew, Isaacs, Ariel, Scott, Connor A. P., Modhiran, Naphak, McMillan, Christopher L. D., Cheung, Stacey T. M., Barr, Jennifer, Marsh, Glenn, Thakur, Nazia, Bailey, Dalan, Li, Kenneth S. M., Luk, Hayes K. H., Kok, Kin-Hang, Lau, Susanna K. P., Woo, Patrick C. Y., Furuyama, Wakako, Marzi, Andrea, Young, Paul R., Chappell, Keith J. and Watterson, Daniel (2022). A platform technology for generating subunit vaccines against diverse viral pathogens. Frontiers in Immunology, 13 963023, 1-16. doi: 10.3389/fimmu.2022.963023
2021
Journal Article
Implications of dengue virus maturation on vaccine induced humoral immunity in mice
Scott, Connor A. P., Amarilla, Alberto A., Bibby, Summa, Newton, Natalee D., Hall, Roy A., Hobson-Peters, Jody, Muller, David A., Chappell, Keith J., Young, Paul R., Modhiran, Naphak and Watterson, Daniel (2021). Implications of dengue virus maturation on vaccine induced humoral immunity in mice. Viruses, 13 (9) 1843, 1843. doi: 10.3390/v13091843
2021
Conference Publication
High-resolution structures of immature and chimeric flaviviruses reveal key features redefining viral architecture and maturation
Hardy, Joshua, Newton, Natalee, Modhiran, Naphak, Scott, Connor, Venugopal, Hari, Vet, Laura, Young, Paul, Hall, Roy, Hobson-Peters, Jody, Watterson, Daniel and Coulibaly, Fasseli (2021). High-resolution structures of immature and chimeric flaviviruses reveal key features redefining viral architecture and maturation. Hoboken, NJ, United States: Wiley-Blackwell Publishing.
2021
Journal Article
A unified route for flavivirus structures uncovers essential pocket factors conserved across pathogenic viruses
Hardy, Joshua M., Newton, Natalee D., Modhiran, Naphak, Scott, Connor A. P., Venugopal, Hariprasad, Vet, Laura J., Young, Paul R., Hall, Roy A., Hobson-Peters, Jody, Coulibaly, Fasséli and Watterson, Daniel (2021). A unified route for flavivirus structures uncovers essential pocket factors conserved across pathogenic viruses. Nature Communications, 12 (1) 3266, 3266. doi: 10.1038/s41467-021-22773-1
2021
Journal Article
A chimeric dengue virus vaccine candidate delivered by high density microarray patches protects against infection in mice
Choo, Jovin J. Y., Vet, Laura J., McMillan, Christopher L. D., Harrison, Jessica J., Scott, Connor A. P., Depelsenaire, Alexandra C. I., Fernando, Germain J. P., Watterson, Daniel, Hall, Roy A., Young, Paul R., Hobson-Peters, Jody and Muller, David A. (2021). A chimeric dengue virus vaccine candidate delivered by high density microarray patches protects against infection in mice. npj Vaccines, 6 (1) 66, 66. doi: 10.1038/s41541-021-00328-1
2021
Journal Article
Preclinical development of a molecular clamp-stabilised subunit vaccine for severe acute respiratory syndrome coronavirus 2
Watterson, Daniel, Wijesundara, Danushka K., Modhiran, Naphak, Mordant, Francesca L., Li, Zheyi, Avumegah, Michael S., McMillan, Christopher L. D., Lackenby, Julia, Guilfoyle, Kate, van Amerongen, Geert, Stittelaar, Koert, Cheung, Stacey T. M., Bibby, Summa, Daleris, Mallory, Hoger, Kym, Gillard, Marianne, Radunz, Eve, Jones, Martina L., Hughes, Karen, Hughes, Ben, Goh, Justin, Edwards, David, Scoble, Judith, Pearce, Lesley, Kowalczyk, Lukasz, Phan, Tram, La, Mylinh, Lu, Louis, Pham, Tam ... Chappell, Keith J. (2021). Preclinical development of a molecular clamp-stabilised subunit vaccine for severe acute respiratory syndrome coronavirus 2. Clinical & Translational Immunology, 10 (4) e1269, e1269. doi: 10.1002/cti2.1269
2021
Journal Article
A broadly protective antibody that targets the flavivirus NS1 protein
Modhiran, Naphak, Song, Hao, Liu, Lidong, Bletchly, Cheryl, Brillault, Lou, Amarilla, Alberto A., Xu, Xiaoying, Qi, Jianxun, Chai, Yan, Cheung, Stacey T. M., Traves, Renee, Setoh, Yin Xiang, Bibby, Summa, Scott, Connor A. P., Freney, Morgan E., Newton, Natalee D., Khromykh, Alexander A., Chappell, Keith J., Muller, David A., Stacey, Katryn J., Landsberg, Michael J., Shi, Yi, Gao, George F., Young, Paul R. and Watterson, Daniel (2021). A broadly protective antibody that targets the flavivirus NS1 protein. Science, 371 (6525), 190-194. doi: 10.1126/science.abb9425
Funding
Current funding
Supervision
Availability
- Dr Connor Scott is:
- Available for supervision
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Media
Enquiries
Contact Dr Connor Scott directly for media enquiries about:
- Infectious disease
- japanese encephalitis virus
- Virus
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