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Professor Timothy Mahony
Professor

Timothy Mahony

Email: 
Phone: 
+61 7 334 66505

Overview

Background

Prof Tim Mahony joined QAAFI’s Centre for Animal Science in October 2010, after 15 years of conducting research projects with the Queensland Government. He obtained his PhD from James Cook University in the area of molecular microbiology. During 2001 and 2002, Prof Mahony was a visiting professor at the University of Saskatchewan.

Research interests

Dr Mahony’s research interests are in the area of molecular virology revolving around improving viral disease control in production animals such as cattle and poultry. His group is characterising the molecular interactions between invading pathogens and the subsequent host responses with the goal of developing new vaccines and diagnostic technologies. A key component of this work includes improving the basic understanding of the molecular mechanisms that underpin and drive viral virulence and evolution. Next-generation sequencing has been used to sequence the genomes of herpesviruses and adenoviruses from a variety of species including, cattle, chickens, marsupials, horses, and crocodiles. Prof Mahony’s team is also investigating the role of virally encoded microRNAs in virulence, replication, and disease development. His group was one of the first in the world to apply bacterial artificial chromosome infectious clone technology for the efficient manipulation of herpesviruses that have large DNA genomes. These strategies are also being exploited to understand viral gene function and the development of vaccines.

Currently, Prof Mahony is researching risk factors that protect and predispose feedlot cattle to developing bovine respiratory disease (BRD). He is also leading the development of new vaccines for BRD and cattle tick infestations. Prof Mahony has also led the development of new vaccine delivery technologies for the poultry industry targeting the application of in ovo strategies. Prof Mahony research into improving animal health is increasing industry productivity, food safety, and consumer confidence in food products and he is keen to explore collaborations with other scientists in this area.

Prof Mahony has a strong interest to work with post-graduate students and has supervised a number of post-graduate students from Australia and overseas. These projects have covered research areas in molecular virology, animal health, vaccine development, and pathogen-host interactions.

Availability

Professor Timothy Mahony is:
Available for supervision
Media expert

Qualifications

  • Doctor of Philosophy, James Cook University

Works

Search Professor Timothy Mahony’s works on UQ eSpace

119 works between 1990 and 2025

1 - 20 of 119 works

2025

Journal Article

Development of multiplex Luminex assays for the surveillance of antimicrobial resistance genes in nasal samples

Fatima, Ghayoor, Omaleki, Lida, Lobo, Edina, Kayal, Advait, Ambrose, Rebecca K., Briody, Tatiana E., Mahony, Timothy J. and Turni, Conny (2025). Development of multiplex Luminex assays for the surveillance of antimicrobial resistance genes in nasal samples. Journal of Microbiological Methods, 237 107234, 107234-237. doi: 10.1016/j.mimet.2025.107234

Development of multiplex Luminex assays for the surveillance of antimicrobial resistance genes in nasal samples

2025

Journal Article

LINC2781 enhances antiviral immunity against coxsackievirus B5 infection by activating the JAK-STAT pathway and blocking G3BP2-mediated STAT1 degradation

Zhang, Jiayu, Li, Jing, Luo, Yonghan, Mahony, Timothy J., Gao, Jingru, Wang, Yanchun, Yang, Xiaotao, Yang, Fan, Ou, Xia, Zhang, Jihong, Yang, Heng and Chen, Wei (2025). LINC2781 enhances antiviral immunity against coxsackievirus B5 infection by activating the JAK-STAT pathway and blocking G3BP2-mediated STAT1 degradation. mSphere, 10 (7) e00062-25, e0006225-7. doi: 10.1128/msphere.00062-25

LINC2781 enhances antiviral immunity against coxsackievirus B5 infection by activating the JAK-STAT pathway and blocking G3BP2-mediated STAT1 degradation

2025

Journal Article

Genomic analysis of the 2017 Aotearoa New Zealand outbreak of Mycoplasma bovis and its position within the global population structure

Binney, Barbara M., Gias, Edna, Foxwell, Jonathan, Little, Alvey, Biggs, Patrick J., French, Nigel, Lambert, Callum, Ha, Hye Jeong, Carter, Glen P., Gyuranecz, Miklós, Pardon, Bart, De Vliegher, Sarne, Boyen, Filip, Bokma, Jade, Krömker, Volker, Wente, Nicole, Mahony, Timothy J., Gibson, Justine S., Barnes, Tamsin S., Wawegama, Nadeeka, Legione, Alistair R., Heller, Martin, Schnee, Christiane, Pelkonen, Sinikka, Autio, Tiina, Higuchi, Hidetoshi, Gondaira, Satoshi and McCulley, Michelle (2025). Genomic analysis of the 2017 Aotearoa New Zealand outbreak of Mycoplasma bovis and its position within the global population structure. Frontiers in Microbiology, 16 1600146, 16. doi: 10.3389/fmicb.2025.1600146

Genomic analysis of the 2017 Aotearoa New Zealand outbreak of Mycoplasma bovis and its position within the global population structure

2025

Journal Article

Evaluation of recombinant extracellular enveloped virion protein candidates for the detection of serological responses to lumpy skin disease virus in cattle

Angsujinda, Kitipong, Kitchanakan, Phatpimol, Daewang, Nabhasbhichayabha, Chintapitaksakul, Lerdchai, Wanganurakkul, Saruda, Chaiyo, Sudkate, Khongchareonporn, Nanthika, Mahony, Timothy J. and Assavalapsakul, Wanchai (2025). Evaluation of recombinant extracellular enveloped virion protein candidates for the detection of serological responses to lumpy skin disease virus in cattle. Veterinary Quarterly, 45 (1), 1-13. doi: 10.1080/01652176.2025.2475989

Evaluation of recombinant extracellular enveloped virion protein candidates for the detection of serological responses to lumpy skin disease virus in cattle

2025

Journal Article

Optimizing Genome Editing in Bovine Cells: A Comparative Study of Cas9 Variants and CRISPR Delivery Methods

Du, Xiaofeng, Quinn, Alexander, Mahony, Timothy, Xia, Di and Porto-Neto, Laercio R. (2025). Optimizing Genome Editing in Bovine Cells: A Comparative Study of Cas9 Variants and CRISPR Delivery Methods. Biocatalysis and Agricultural Biotechnology, 65 103553, 103553. doi: 10.1016/j.bcab.2025.103553

Optimizing Genome Editing in Bovine Cells: A Comparative Study of Cas9 Variants and CRISPR Delivery Methods

2025

Journal Article

Delivery of virus-specific dsRNA using a composite nanomaterial improves the protection of shrimp (Litopenaeus vannamei) against yellow head virus challenge

Suksai, Sucharat, Attasart, Pongsopee, Angsujinda, Kitipong, Zhang, Bing, Xu, Zhi Ping, Mitter, Neena, Mahony, Timothy J. and Assavalapsakul, Wanchai (2025). Delivery of virus-specific dsRNA using a composite nanomaterial improves the protection of shrimp (Litopenaeus vannamei) against yellow head virus challenge. Aquaculture, 595 741570, 1-8. doi: 10.1016/j.aquaculture.2024.741570

Delivery of virus-specific dsRNA using a composite nanomaterial improves the protection of shrimp (Litopenaeus vannamei) against yellow head virus challenge

2025

Book Chapter

Australian Sheep Blowfly Lucilia Cuprina Management: Established Methods and RNA Interference-Based Biocontrol

Yang, Yunjia, Mitter, Neena, Mody, Karishma T. and Mahony, Timothy J. (2025). Australian Sheep Blowfly Lucilia Cuprina Management: Established Methods and RNA Interference-Based Biocontrol. RNA interference in Agriculture: Basic Science to Applications. (pp. 607-631) Cham: Springer Nature Switzerland. doi: 10.1007/978-3-031-81549-2_23

Australian Sheep Blowfly Lucilia Cuprina Management: Established Methods and RNA Interference-Based Biocontrol

2024

Journal Article

Potential approaches to create ultimate genotypes in crops and livestock

Hayes, Ben J., Mahony, Timothy J., Villiers, Kira, Warburton, Christie, Kemper, Kathryn E., Dinglasan, Eric, Robinson, Hannah, Powell, Owen, Voss-Fels, Kai, Godwin, Ian D. and Hickey, Lee T. (2024). Potential approaches to create ultimate genotypes in crops and livestock. Nature Genetics, 56 (11), 2310-2317. doi: 10.1038/s41588-024-01942-0

Potential approaches to create ultimate genotypes in crops and livestock

2024

Journal Article

Chromosome-scale genome assembly of the sheep-biting louse Bovicola ovis using nanopore sequencing data and Pore-C analysis

Ong, Chian Teng, Mody, Karishma T., Cavallaro, Antonino S., Yan, Yakun, Nguyen, Loan T., Shao, Renfu, Mitter, Neena, Mahony, Timothy J. and Ross, Elizabeth M. (2024). Chromosome-scale genome assembly of the sheep-biting louse Bovicola ovis using nanopore sequencing data and Pore-C analysis. International Journal of Molecular Sciences, 25 (14) 7824, 1-15. doi: 10.3390/ijms25147824

Chromosome-scale genome assembly of the sheep-biting louse Bovicola ovis using nanopore sequencing data and Pore-C analysis

2024

Journal Article

The use of cell and larval assays to identify target genes for RNA interference‐meditated control of the Australian sheep blowfly (Lucilia cuprina)

Yang, Yunjia, Zhang, Bing, Yong, Jiaxi, James, Peter, Xu, Zhi Ping, Mitter, Neena, Mahony, Timothy J. and Mody, Karishma T. (2024). The use of cell and larval assays to identify target genes for RNA interference‐meditated control of the Australian sheep blowfly (Lucilia cuprina). Pest Management Science, 80 (9), 4686-4698. doi: 10.1002/ps.8190

The use of cell and larval assays to identify target genes for RNA interference‐meditated control of the Australian sheep blowfly (Lucilia cuprina)

2024

Journal Article

Epidemiological risk factors and modelling approaches for risk assessment of lumpy skin disease virus introduction and spread: methodological review and implications for risk-based surveillance in Australia

Owada, Kei, Mahony, Timothy J., Ambrose, Rebecca K., Hayes, Ben J. and Soares Magalhães, Ricardo J. (2024). Epidemiological risk factors and modelling approaches for risk assessment of lumpy skin disease virus introduction and spread: methodological review and implications for risk-based surveillance in Australia. Transboundary and Emerging Diseases, 2024 (1) 3090226, 1-16. doi: 10.1155/2024/3090226

Epidemiological risk factors and modelling approaches for risk assessment of lumpy skin disease virus introduction and spread: methodological review and implications for risk-based surveillance in Australia

2024

Journal Article

Genomic estimated breeding values for bovine respiratory disease resistance in Angus feedlot cattle

Hayes, B. J., Duff, C. J., Hine, B. C. and Mahony, T. J. (2024). Genomic estimated breeding values for bovine respiratory disease resistance in Angus feedlot cattle. Journal of Animal Science, 102 skae113. doi: 10.1093/jas/skae113

Genomic estimated breeding values for bovine respiratory disease resistance in Angus feedlot cattle

2024

Journal Article

Development of a lateral flow assay for rapid and accurate detection of chicken anemia virus

Angsujinda, Kitipong, Peala, Wisuttiya, Sittidech, Akekarach, Wanganurakkul, Saruda, Mahony, Timothy J., Wang, Sheng-Fan, Smith, Duncan R., Chintapitaksakul, Lerdchai, Khongchareonporn, Nanthika and Assavalapsakul, Wanchai (2024). Development of a lateral flow assay for rapid and accurate detection of chicken anemia virus. Poultry Science, 103 (3) 103432, 103432. doi: 10.1016/j.psj.2024.103432

Development of a lateral flow assay for rapid and accurate detection of chicken anemia virus

2024

Journal Article

Finding biomarkers of experience in animals

Babington, Sarah, Tilbrook, Alan J., Maloney, Shane K., Fernandes, Jill N., Crowley, Tamsyn M., Ding, Luoyang, Fox, Archa H., Zhang, Song, Kho, Elise A., Cozzolino, Daniel, Mahony, Timothy J. and Blache, Dominique (2024). Finding biomarkers of experience in animals. Journal of Animal Science and Biotechnology, 15 (1) 28, 1-20. doi: 10.1186/s40104-023-00989-z

Finding biomarkers of experience in animals

2024

Journal Article

Can the revolution in mRNA-based vaccine technologies solve the intractable health issues of current ruminant production systems?

Mahony, Timothy J., Briody, Tatiana E. and Ommeh, Sheila C. (2024). Can the revolution in mRNA-based vaccine technologies solve the intractable health issues of current ruminant production systems?. Vaccines, 12 (2) 152. doi: 10.3390/vaccines12020152

Can the revolution in mRNA-based vaccine technologies solve the intractable health issues of current ruminant production systems?

2024

Journal Article

Does the immune stimulant Amplimune® modulate humoral and cytokine responses to commercial bovine respiratory disease vaccines in cattle?

Alexander, A. L., Doyle, E. K., Ingham, A. B., Colditz, I. G., Andronicos, N. M., Hine, B. C. and Mahony, T. J. (2024). Does the immune stimulant Amplimune® modulate humoral and cytokine responses to commercial bovine respiratory disease vaccines in cattle?. Animal Production Science, 64 (4) AN23235. doi: 10.1071/an23235

Does the immune stimulant Amplimune® modulate humoral and cytokine responses to commercial bovine respiratory disease vaccines in cattle?

2023

Journal Article

Skim-Nanopore sequencing for routine genomic evaluation and bacterial pathogen detection in cattle

Lamb, H. J., Nguyen, L. T., Briody, T. E., Ambrose, R. K., Hayes, B. J., Mahony, T. J. and Ross, E. M. (2023). Skim-Nanopore sequencing for routine genomic evaluation and bacterial pathogen detection in cattle. Animal Production Science, 63 (11), 1074-1085. doi: 10.1071/an22451

Skim-Nanopore sequencing for routine genomic evaluation and bacterial pathogen detection in cattle

2023

Journal Article

Statement in Support of: “Virology under the Microscope—a Call for Rational Discourse”

Speck, Peter, Mackenzie, Jason, Bull, Rowena A., Slobedman, Barry, Drummer, Heidi, Fraser, Johanna, Herrero, Lara, Helbig, Karla, Londrigan, Sarah, Moseley, Gregory, Prow, Natalie, Hansman, Grant, Edwards, Robert, Ahlenstiel, Chantelle, Abendroth, Allison, Tscharke, David, Hobson-Peters, Jody, Kriiger-Loterio, Robson, Parry, Rhys, Marsh, Glenn, Harding, Emma, Jacques, David A., Gartner, Matthew J., Lee, Wen Shi, McAuley, Julie, Vaz, Paola, Sainsbury, Frank, Tate, Michelle D., Sinclair, Jane ... Young, Paul (2023). Statement in Support of: “Virology under the Microscope—a Call for Rational Discourse”. Journal of Virology, 97 (5) e0045123, 1-3. doi: 10.1128/jvi.00451-23

Statement in Support of: “Virology under the Microscope—a Call for Rational Discourse”

2023

Journal Article

Statement in Support of: “Virology under the Microscope—a Call for Rational Discourse”

Speck, Peter, Mackenzie, Jason, Bull, Rowena A., Slobedman, Barry, Drummer, Heidi, Fraser, Johanna, Herrero, Lara, Helbig, Karla, Londrigan, Sarah, Moseley, Gregory, Prow, Natalie, Hansman, Grant, Edwards, Robert, Ahlenstiel, Chantelle, Abendroth, Allison, Tscharke, David, Hobson-Peters, Jody, Kriiger-Loterio, Robson, Parry, Rhys, Marsh, Glenn, Harding, Emma, Jacques, David A., Gartner, Matthew J., Lee, Wen Shi, McAuley, Julie, Vaz, Paola, Sainsbury, Frank, Tate, Michelle D., Sinclair, Jane ... Young, Paul (2023). Statement in Support of: “Virology under the Microscope—a Call for Rational Discourse”. mSphere, 8 (3), e0016523. doi: 10.1128/msphere.00165-23

Statement in Support of: “Virology under the Microscope—a Call for Rational Discourse”

2023

Journal Article

Statement in Support of: “Virology under the Microscope—a Call for Rational Discourse”

Speck, Peter, Mackenzie, Jason, Bull, Rowena A., Slobedman, Barry, Drummer, Heidi, Fraser, Johanna, Herrero, Lara, Helbig, Karla, Londrigan, Sarah, Moseley, Gregory, Prow, Natalie, Hansman, Grant, Edwards, Robert, Ahlenstiel, Chantelle, Abendroth, Allison, Tscharke, David, Hobson-Peters, Jody, Kriiger-Loterio, Robson, Parry, Rhys, Marsh, Glenn, Harding, Emma, Jacques, David A., Gartner, Matthew J., Lee, Wen Shi, McAuley, Julie, Vaz, Paola, Sainsbury, Frank, Tate, Michelle D., Sinclair, Jane ... Young, Paul (2023). Statement in Support of: “Virology under the Microscope—a Call for Rational Discourse”. mBio, 14 (3), e0081523. doi: 10.1128/mbio.00815-23

Statement in Support of: “Virology under the Microscope—a Call for Rational Discourse”

Funding

Current funding

  • 2025
    The development of a disseminating herpesvirus vector vaccine for Australian flying foxes (Pteropus spp.) to reduce the risk of zoonotic diseases
    Logan City Council
    Open grant
  • 2023 - 2025
    Saving the endangered Spectacled flying fox from annual tick paralysis mortality events:
    Threatened Species Research Grants
    Open grant
  • 2023 - 2025
    Harnessing the synbio potential of Australia's stingless bees, the first step
    Sugar Research Australia Limited
    Open grant
  • 2022 - 2026
    On-farm genomics: genomic solutions for Northern beef cattle management and breeding
    Meat & Livestock Australia
    Open grant
  • 2021 - 2026
    NB2: Assessing practical interventions to reduce calf wastage and herd mortality in northern systems
    Meat & Livestock Australia
    Open grant

Past funding

  • 2023
    Development of a novel assay for the detection of the bovine SRY transcript
    NBRYO PTY LTD
    Open grant
  • 2023 - 2025
    Evaluation of a prototype vaccine for rattles in foals
    Agrifutures Australia
    Open grant
  • 2022 - 2024
    Use of an inhibin vaccine to increase litter size in pigs (University of Adelaide administered APRIL grant)
    University of Adelaide
    Open grant
  • 2020 - 2021
    Evaluation of anti-tick vaccines for tick immunological control in cattle
    Meat & Livestock Australia
    Open grant
  • 2019
    Advanced Nanoparticle, Colloid and Microparticle Characterisation and Precision Engineering Nanosystems Facility
    UQ Major Equipment and Infrastructure
    Open grant
  • 2017 - 2024
    Development of a single shot immunocontraceptive vaccine for cattle
    Meat & Livestock Australia
    Open grant
  • 2017 - 2023
    Improving bovine respiratory disease control through the characterisation of pathogen genomics and host interactions
    Meat & Livestock Australia
    Open grant
  • 2016 - 2019
    Testing and verification of a single-dose cattle tick vaccine
    Meat & Livestock Australia
    Open grant
  • 2015
    Identification of new and effective antimicrobials for sustainable use in intensively finished cattle
    UQ Collaboration and Industry Engagement Fund - Seed Research Grant
    Open grant
  • 2012 - 2014
    BioClay - Managing biotic stresses from field to market
    Bill & Melinda Gates Foundation
    Open grant
  • 2012 - 2016
    Live viral vaccines for bovine respiratory disease: BVDV efficacy
    Meat & Livestock Australia
    Open grant
  • 2012 - 2014
    Changing the vaccination paradigm: A single-dose cattle-tick vaccine for Queensland's extensive beef cattle enterprises using biopolymer platform
    Queensland Government Smart Futures Research Partnerships Program
    Open grant
  • 2011 - 2014
    Application of herpes viral vectors for in ovo delivery
    Queensland Department of Employment, Economic Development and Innovation
    Open grant
  • 2011 - 2012
    The function of microRNAs encoded within the Bovine herpesvirus 1 origin of replication
    UQ New Staff Research Start-Up Fund
    Open grant
  • 2010 - 2015
    Epidemiology and management of bovine respiratory disease in feedlot cattle (Meat and Livestock Australia project novated from DEEDI)
    Meat & Livestock Australia
    Open grant

Supervision

Availability

Professor Timothy Mahony is:
Available for supervision

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Supervision history

Current supervision

  • Doctor Philosophy

    Development of a viral vector vaccine for Australian flying foxes

    Principal Advisor

    Other advisors: Professor Joanne Meers

  • Doctor Philosophy

    The application of genome editing to improve the disease resilience of livestock species

    Principal Advisor

    Other advisors: Dr Karishma Mody

  • Doctor Philosophy

    Innovative RNAi for ectoparasites of livestock

    Associate Advisor

    Other advisors: Dr Karl Robinson, Dr Karishma Mody

  • Doctor Philosophy

    Characterisation of a novel flying fox retrovirus

    Associate Advisor

    Other advisors: Professor Joanne Meers, Dr Lee McMichael

Completed supervision

Media

Enquiries

Contact Professor Timothy Mahony directly for media enquiries about:

  • Animal vaccines
  • Animals - viral diseases
  • Vaccines - animals
  • Viral diseases - animals

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