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Dr Bernadine Flanagan
Dr

Bernadine Flanagan

Email: 
Phone: 
+61 7 336 53449

Overview

Background

Since joining the Centre for Nutrition and Food Science in 2004, my work has focussed on food structure and how it changes during digestion and fermentation. I use NMR spectroscopy and wet chemistry techniques, to characterise polysaccharides particularly: starch, plant cell walls, dietary fibre and cellulose. My research has resulted in the publication of 93 papers with over 6000 citations and a H-index of 39 (scopus). I regularly review papers for Food Hydrocolloids and Carbohydrate polymers. I have co-supervised eight PhDs to completion and am currently co-supervising four PhD students and am principal supervisor to one PhD and two masters students.

After graduating with a Bachelor of Science (Honours, 1997, UQ) and PhD in Inorganic Chemistry (2002, UQ) I worked with Prof David Fairlie (h-index 104, 42, 140 citations) to study peptide synthesis and high-field, multi-dimensional NMR.

I have practical experience with in vitro and digestion and fermentation and havecollaborated to perfect a batch fermentation system to compare the fermentability of a number of complex dietary fibres using human faecal inoculum. Using this methodology, I have studied how the chemistry and architecture of dietary fibres affects the digestion and fermentation of starches and dietary fibres. My Skills in NMR spectroscopy have enabled me to develop methods for quantifying starch molecular order and to quantify Short Chain Fatty acids and other fermemetabolites.

Availability

Dr Bernadine Flanagan is:
Available for supervision

Qualifications

  • Bachelor (Honours) of Science (Advanced), The University of Queensland
  • Doctor of Philosophy, The University of Queensland

Research interests

  • Investigating food structure and how it affects digestibility and fermentability.

    Characterising starch and dietary fibres and exploring how they change in response to differences in processing conditions. How does food architecture affect the digestibility and fermentability of food and feeds. Using spectroscopy and analytical chemistry techniques to explore the composition and structures of food and feeds. Determining how the interaction of plant cell wall polysaccharides influences their structure and function with particular focus on the interactions of cellulose hemicelluloses. How the density and solubility of plant cell wall components drives fermentability.

Research impacts

Over the last twenty years (13 years FTE) I have been part of many multi-disciplinary teams working with industry, government and fellow university based researchers nationally and internationally. For Six years as part of the CSIRO Food Futures Flagship and then for 7 years as a member of the ARC Centre of Excellence for Plant Cell walls, a team of over 80 researchers, based at UA, UM, ANSTO and international collaborators in the UK and Sweden. These collaborations lead to many multi-disciplinary publications with a focus of polysaccharide structure and function. Using NMR, I established new methods for polysaccharide structure analysis and increased our understanding of complex plant cell wall structure relationships.

In 2005 I was awarded a UQ New Staff Research Start Up Fund. In 2023 I was a CI on a successful $1.68 million ARC LIEF bid for a national network for magnetic resonance spectroscopy. I am a CI on a recently awarded a $788, 130 ARC Linkage grant, LP240100343, in this project I will lead the activities in polysaccharide structure and characterisation. As a result of my interest in plant polysaccharides, I was voted Vice Chair of Australasian Grain Science Association (AGSA) and was appointed 2025 AGSA Brisbane conference chair.

Works

Search Professor Bernadine Flanagan’s works on UQ eSpace

129 works between 1999 and 2026

61 - 80 of 129 works

2017

Conference Publication

An insight into the composition and properties of wheat endosperm cell walls

Gartaula, Ghanendra, Dhital, Sushil, Flanagan, Bernadine M. and Gidley, Mike (2017). An insight into the composition and properties of wheat endosperm cell walls. 2017 AACCI Annual Meeting (Cereals 17), San Diego CA, United States, 8-11 October 2017.

An insight into the composition and properties of wheat endosperm cell walls

2016

Journal Article

Microstructure and mechanical properties of arabinoxylan and (1,3;1,4)-β-glucan gels produced by cryo-gelation

Lopez-Sanchez, Patricia, Wang, Dongjie, Zhang, Zhiyan, Flanagan, Bernadine and Gidley, Michael J. (2016). Microstructure and mechanical properties of arabinoxylan and (1,3;1,4)-β-glucan gels produced by cryo-gelation. Carbohydrate Polymers, 151, 862-870. doi: 10.1016/j.carbpol.2016.06.038

Microstructure and mechanical properties of arabinoxylan and (1,3;1,4)-β-glucan gels produced by cryo-gelation

2016

Journal Article

Composition and structure of tuber cell walls affect: in vitro digestibility of potato (Solanum tuberosum L.)

Frost, Jovyn K. T., Flanagan, Bernadine M., Brummell, David A., O'Donoghue, Erin M., Mishra, Suman, Gidley, Michael J. and Monro, John A. (2016). Composition and structure of tuber cell walls affect: in vitro digestibility of potato (Solanum tuberosum L.). Food and Function, 7 (10), 4202-4212. doi: 10.1039/c6fo00895j

Composition and structure of tuber cell walls affect: in vitro digestibility of potato (Solanum tuberosum L.)

2016

Journal Article

Multi-scale model for the hierarchical architecture of native cellulose hydrogels

Martinez-Sanz, Marta, Mikkelsen, Deirdre, Flanagan, Bernadine, Gidley, Michael J. and Gilbert, Elliot P. (2016). Multi-scale model for the hierarchical architecture of native cellulose hydrogels. Carbohydrate Polymers, 147, 542-555. doi: 10.1016/j.carbpol.2016.03.098

Multi-scale model for the hierarchical architecture of native cellulose hydrogels

2016

Journal Article

Investigation of the micro- and nano-scale architecture of cellulose hydrogels with plant cell wall polysaccharides: a combined USANS/SANS study

Martinez-Sanz, Marta, Mikkelsen, Deirdre, Flanagan, Bernadine M., Rehm, Christine, de Campo, Liliana, Gidley, Michael J. and Gilbert, Elliot P. (2016). Investigation of the micro- and nano-scale architecture of cellulose hydrogels with plant cell wall polysaccharides: a combined USANS/SANS study. Polymer, 105, 449-460. doi: 10.1016/j.polymer.2016.07.015

Investigation of the micro- and nano-scale architecture of cellulose hydrogels with plant cell wall polysaccharides: a combined USANS/SANS study

2016

Journal Article

Molecular interactions of a model bile salt and porcine bile with (1,3:1,4)-β-glucans and arabinoxylans probed by 13C NMR and SAXS

Gunness, Purnima, Flanagan, Bernadine M., Mata, Jitendra P., Gilbert, Elliot P. and Gidley, Michael J. (2016). Molecular interactions of a model bile salt and porcine bile with (1,3:1,4)-β-glucans and arabinoxylans probed by 13C NMR and SAXS. Food Chemistry, 197 (Pt A), 676-685. doi: 10.1016/j.foodchem.2015.10.104

Molecular interactions of a model bile salt and porcine bile with (1,3:1,4)-β-glucans and arabinoxylans probed by 13C NMR and SAXS

2016

Journal Article

Infrared spectroscopy as a tool to characterise starch ordered structure - A joint FTIR-ATR, NMR, XRD and DSC study

Warren, Frederick J., Gidley, Michael J. and Flanagan, Bernadine M. (2016). Infrared spectroscopy as a tool to characterise starch ordered structure - A joint FTIR-ATR, NMR, XRD and DSC study. Carbohydrate Polymers, 139, 35-42. doi: 10.1016/j.carbpol.2015.11.066

Infrared spectroscopy as a tool to characterise starch ordered structure - A joint FTIR-ATR, NMR, XRD and DSC study

2015

Journal Article

Extrusion induced low-order starch matrices: enzymic hydrolysis and structure

Zhang, Bin, Dhital, Sushil, Flanagan, Bernadine M., Luckman, Paul, Halley, Peter J. and Gidley, Michael J. (2015). Extrusion induced low-order starch matrices: enzymic hydrolysis and structure. Carbohydrate Polymers, 134 10197, 485-496. doi: 10.1016/j.carbpol.2015.07.095

Extrusion induced low-order starch matrices: enzymic hydrolysis and structure

2015

Journal Article

Rapid quantification of starch molecular order through multivariate modelling of <sup>13</sup>C CP/MAS NMR spectra

Flanagan, Bernadine M., Gidley, Michael J. and Warren, Frederick J. (2015). Rapid quantification of starch molecular order through multivariate modelling of 13C CP/MAS NMR spectra. Chemical Communications, 51 (80), 14856-14858. doi: 10.1039/c5cc06144j

Rapid quantification of starch molecular order through multivariate modelling of <sup>13</sup>C CP/MAS NMR spectra

2015

Journal Article

In vitro fermentation of chewed mango and banana: particle size, starch and vascular fibre effects

Low, Dorrain Y., Williams, Barbara A., D'Arcy, Bruce R., Flanagan, Bernadine M. and Gidley, Michael J. (2015). In vitro fermentation of chewed mango and banana: particle size, starch and vascular fibre effects. Food and Function, 6 (8), 2464-2474. doi: 10.1039/c5fo00363f

In vitro fermentation of chewed mango and banana: particle size, starch and vascular fibre effects

2015

Journal Article

Characteristics of starch-based films with different amylose contents plasticised by 1-ethyl-3-methylimidazolium acetate

Xie, Fengwei, Flanagan, Bernadine M., Li, Ming, Truss, Rowan W., Halley, Peter J., Gidley, Michael J., McNally, Tony, Shamshina, Julia L. and Rogers, Robin D. (2015). Characteristics of starch-based films with different amylose contents plasticised by 1-ethyl-3-methylimidazolium acetate. Carbohydrate Polymers, 122, 160-168. doi: 10.1016/j.carbpol.2014.12.072

Characteristics of starch-based films with different amylose contents plasticised by 1-ethyl-3-methylimidazolium acetate

2015

Journal Article

In vitro digestibility and physicochemical properties of milled rice

Dhital, Sushil, Dabit, Laura, Zhang, Bin, Flanagan, Bernadine and Shrestha, Ashok K. (2015). In vitro digestibility and physicochemical properties of milled rice. Food Chemistry, 172, 757-765. doi: 10.1016/j.foodchem.2014.09.138

In vitro digestibility and physicochemical properties of milled rice

2015

Journal Article

Molecular, mesoscopic and microscopic structure evolution during amylase digestion of extruded maize and high amylose maize starches

Shrestha, Ashok K., Blazek, Jaroslav, Flanagan, Bernadine M., Dhital, Sushil, Larroque, Oscar, Morell, Matthew K., Gilbert, Elliot P. and Gidley, Michael J. (2015). Molecular, mesoscopic and microscopic structure evolution during amylase digestion of extruded maize and high amylose maize starches. Carbohydrate Polymers, 118, 224-234. doi: 10.1016/j.carbpol.2014.11.025

Molecular, mesoscopic and microscopic structure evolution during amylase digestion of extruded maize and high amylose maize starches

2015

Journal Article

Binding of dietary polyphenols to cellulose: structural and nutritional aspects

Phan, Anh Dao T., Netzel, Gabriele, Wang, Dongjie, Flanagan, Bernadine M., D'Arcy, Bruce R. and Gidley, Michael J. (2015). Binding of dietary polyphenols to cellulose: structural and nutritional aspects. Food Chemistry, 171, 388-396. doi: 10.1016/j.foodchem.2014.08.118

Binding of dietary polyphenols to cellulose: structural and nutritional aspects

2015

Journal Article

Interactions of Arabinoxylan and (1,3)(1,4)-β-Glucan with Cellulose Networks

Mikkelsen, Deirdre, Flanagan, Bernadine M, Wilson, Sarah M, Bacic, Antony and Gidley, Michael J (2015). Interactions of Arabinoxylan and (1,3)(1,4)-β-Glucan with Cellulose Networks. Biomacromolecules, 16 (4), 1232-1239. doi: 10.1021/acs.biomac.5b00009

Interactions of Arabinoxylan and (1,3)(1,4)-β-Glucan with Cellulose Networks

2015

Journal Article

Poroelastic Mechanical Effects of Hemicelluloses on Cellulosic Hydrogels under Compression

Lopez-Sanchez, Patricia, Cersosimo, Julie, Wang, Dongjie, Flanagan, Bernadine, Stokes, Jason R. and Gidley, Michael J. (2015). Poroelastic Mechanical Effects of Hemicelluloses on Cellulosic Hydrogels under Compression. PLoS One, 10 (3) e0122132, e0122132. doi: 10.1371/journal.pone.0122132

Poroelastic Mechanical Effects of Hemicelluloses on Cellulosic Hydrogels under Compression

2015

Other Outputs

Rapid assessment of ordered molecular structure in a semi-crystalline polymer, starch, directly from solid state NMR spectra

Flanagan, Bernadine M., Gidley, Michael J. and Warren, Frederick J. (2015). Rapid assessment of ordered molecular structure in a semi-crystalline polymer, starch, directly from solid state NMR spectra. The Royal Society of Chemistry. (Dataset) doi: 10.14264/uql.2017.269

Rapid assessment of ordered molecular structure in a semi-crystalline polymer, starch, directly from solid state NMR spectra

2014

Journal Article

Characteristics of starch-based films plasticised by glycerol and by the ionic liquid 1-ethyl-3-methylimidazolium acetate: a comparative study

Xie, Fengwei, Flanagan, Bernadine M., Li, Ming, Sangwan, Parveen, Truss, Rowan W., Halley, Peter J., Strounina, Ekaterina V., Whittaker, Andrew K., Gidley, Michael J., Dean, Katherine M., Shamshina, Julia L., Rogers, Robin D. and McNally, Tony (2014). Characteristics of starch-based films plasticised by glycerol and by the ionic liquid 1-ethyl-3-methylimidazolium acetate: a comparative study. Carbohydrate Polymers, 111, 841-848. doi: 10.1016/j.carbpol.2014.05.058

Characteristics of starch-based films plasticised by glycerol and by the ionic liquid 1-ethyl-3-methylimidazolium acetate: a comparative study

2014

Journal Article

Rheology and microstructure characterisation of small intestinal digesta from pigs fed a red meat-containing Western-style diet

Shelat, Kinnari J., Nicholson, Timothy, Flanagan, Barnadine M., Zhang, Dagong, Williams, Barbara A. and Gidley, Michael J. (2014). Rheology and microstructure characterisation of small intestinal digesta from pigs fed a red meat-containing Western-style diet. Food Hydrocolloids, 44, 300-308. doi: 10.1016/j.foodhyd.2014.09.036

Rheology and microstructure characterisation of small intestinal digesta from pigs fed a red meat-containing Western-style diet

2014

Journal Article

Freeze-drying changes the structure and digestibility of B-polymorphic starches

Zhang, Bin, Wang, Kai, Hasjim, Jovin, Li, Enpeng, Flanagan, Bernadine M., Gidley, Michael J. and Dhital, Sushil (2014). Freeze-drying changes the structure and digestibility of B-polymorphic starches. Journal of Agricultural and Food Chemistry, 62 (7), 1482-1491. doi: 10.1021/jf405196m

Freeze-drying changes the structure and digestibility of B-polymorphic starches

Funding

Current funding

  • 2025 - 2028
    Chemical and mechanical modification of starch-based packaging materials
    ARC Linkage Projects
    Open grant

Past funding

  • 2024 - 2025
    A national network for magnetic resonance spectroscopy
    ARC Linkage Infrastructure, Equipment and Facilities
    Open grant
  • 2005 - 2007
    Study of Iron Chelation in Rice
    UQ New Staff Research Start-Up Fund
    Open grant

Supervision

Availability

Dr Bernadine Flanagan is:
Available for supervision

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Supervision history

Current supervision

Completed supervision

Media

Enquiries

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