
Overview
Background
Since joining the Centre for Nutrition and Food Science in 2004, my work has focussed on food structure and how it changes during digestion and fermentation. I use NMR spectroscopy and wet chemistry techniques, to characterise polysaccharides particularly: starch, plant cell walls, dietary fibre and cellulose. My research has resulted in the publication of 93 papers with over 6000 citations and a H-index of 39 (scopus). I regularly review papers for Food Hydrocolloids and Carbohydrate polymers. I have co-supervised eight PhDs to completion and am currently co-supervising four PhD students and am principal supervisor to one PhD and two masters students.
After graduating with a Bachelor of Science (Honours, 1997, UQ) and PhD in Inorganic Chemistry (2002, UQ) I worked with Prof David Fairlie (h-index 104, 42, 140 citations) to study peptide synthesis and high-field, multi-dimensional NMR.
I have practical experience with in vitro and digestion and fermentation and havecollaborated to perfect a batch fermentation system to compare the fermentability of a number of complex dietary fibres using human faecal inoculum. Using this methodology, I have studied how the chemistry and architecture of dietary fibres affects the digestion and fermentation of starches and dietary fibres. My Skills in NMR spectroscopy have enabled me to develop methods for quantifying starch molecular order and to quantify Short Chain Fatty acids and other fermemetabolites.
Availability
- Dr Bernadine Flanagan is:
- Available for supervision
Fields of research
Qualifications
- Bachelor (Honours) of Science (Advanced), The University of Queensland
- Doctor of Philosophy, The University of Queensland
Research interests
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Investigating food structure and how it affects digestibility and fermentability.
Characterising starch and dietary fibres and exploring how they change in response to differences in processing conditions. How does food architecture affect the digestibility and fermentability of food and feeds. Using spectroscopy and analytical chemistry techniques to explore the composition and structures of food and feeds. Determining how the interaction of plant cell wall polysaccharides influences their structure and function with particular focus on the interactions of cellulose hemicelluloses. How the density and solubility of plant cell wall components drives fermentability.
Research impacts
Over the last twenty years (13 years FTE) I have been part of many multi-disciplinary teams working with industry, government and fellow university based researchers nationally and internationally. For Six years as part of the CSIRO Food Futures Flagship and then for 7 years as a member of the ARC Centre of Excellence for Plant Cell walls, a team of over 80 researchers, based at UA, UM, ANSTO and international collaborators in the UK and Sweden. These collaborations lead to many multi-disciplinary publications with a focus of polysaccharide structure and function. Using NMR, I established new methods for polysaccharide structure analysis and increased our understanding of complex plant cell wall structure relationships.
In 2005 I was awarded a UQ New Staff Research Start Up Fund. In 2023 I was a CI on a successful $1.68 million ARC LIEF bid for a national network for magnetic resonance spectroscopy. I am a CI on a recently awarded a $788, 130 ARC Linkage grant, LP240100343, in this project I will lead the activities in polysaccharide structure and characterisation. As a result of my interest in plant polysaccharides, I was voted Vice Chair of Australasian Grain Science Association (AGSA) and was appointed 2025 AGSA Brisbane conference chair.
Works
Search Professor Bernadine Flanagan’s works on UQ eSpace
2002
Journal Article
An XPS study of an isomorphous trivalent lanthanoid series
Bernhardt, P. V., Flanagan, B. M., Riley, M. J. and Wood, B. J. (2002). An XPS study of an isomorphous trivalent lanthanoid series. Journal of Electron Spectroscopy And Related Phenomena, 124 (1), 73-77. doi: 10.1016/S0368-2048(02)00011-7
2002
Journal Article
A ligand-field analysis of the trensal (H3trensal = 2,2',2' '-tris(salicylideneimino)triethylamine) Ligand. An application of the angular overlap model to lanthanides
Flanagan, Bernadine M., Bernhardt, Paul V., Krause, Elmars R., Lüthi, Stefan R. and Riley, Mark J. (2002). A ligand-field analysis of the trensal (H3trensal = 2,2',2' '-tris(salicylideneimino)triethylamine) Ligand. An application of the angular overlap model to lanthanides. Inorganic Chemistry, 41 (20), 5024-5033. doi: 10.1021/ic011276q
2002
Other Outputs
The spectroscopy of trivalent lanthanoid ions in organic hosts
Flanagan, Bernadine Mary (2002). The spectroscopy of trivalent lanthanoid ions in organic hosts. PhD Thesis, School of Molecular and Microbial Sciences, The University of Queensland. doi: 10.14264/105907
2001
Journal Article
Completion of the isomorphous Ln(trensal) series
Bernhardt, P. V., Flanagan, B. M. and Riley, M. J. (2001). Completion of the isomorphous Ln(trensal) series. Australian Journal of Chemistry, 54 (4), 229-232. doi: 10.1071/CH01076
2001
Journal Article
Ligand-field analysis of an Er(III) complex with a heptadentate tripodal N4O3 ligand
Flanagan, B. M., Bernhardt, P. V., Krausz, E. R., Luthi, S. R. and Riley, M. J. (2001). Ligand-field analysis of an Er(III) complex with a heptadentate tripodal N4O3 ligand. Inorganic Chemistry, 40 (21), 5401-5407. doi: 10.1021/ic0103244
2001
Conference Publication
Predicting Ianthanide spectroscopy and applications to energy up-conversion
Flanagan, B., Bernhardt, P. V., Luethi, S. and Riley, M. J. (2001). Predicting Ianthanide spectroscopy and applications to energy up-conversion. Australiasian Conference on Optics, Lasers and Spectroscopy, Brisbane, 3-6 December, 2001. Brisbane: ACOLS 2001.
2000
Journal Article
Isomorphous Ianthanide complexes of a Tripodal N4O3 Ligand
Bernhardt, P. V., Flanagan, B. and Riley, M. J. (2000). Isomorphous Ianthanide complexes of a Tripodal N4O3 Ligand. Australian Journal of Chemistry, 53 (3), 229-231. doi: 10.1071/CH99175
1999
Conference Publication
Rare earth dimers as candidates for upconversion
Bernhardt, P. V., Flanagan, B. and Riley, M. J. (1999). Rare earth dimers as candidates for upconversion. IC '99, Wellington, NZ, 31 January - 4 February 1999. Wellington, NZ: NZ Institute of Chemistry.
1999
Journal Article
Metal-centred versus ligand-centred luminescence quenching of a macrocyclic copper(II) complex
Bernhardt, P. V., Flanagan, B. M. and Riley, M. J. (1999). Metal-centred versus ligand-centred luminescence quenching of a macrocyclic copper(II) complex. Journal of The Chemical Society- Dalton Transactions (20), 3579-3584. doi: 10.1039/a902881a
Supervision
Availability
- Dr Bernadine Flanagan is:
- Available for supervision
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Supervision history
Current supervision
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Doctor Philosophy
Improving protein digestion in broiler chicken by application of exogenous enzymes
Principal Advisor
Other advisors: Professor Mike Gidley, Professor Eugeni Roura
-
Doctor Philosophy
Sustainable Precision Feeding in Broiler Chickens in Australia
Associate Advisor
Other advisors: Professor Mike Gidley, Professor Eugeni Roura
-
Doctor Philosophy
Understanding the relationship between the shape, size and local density of food gels and their functionality in vitro
Associate Advisor
Other advisors: Dr Deirdre Mikkelsen, Professor Mike Gidley
-
Doctor Philosophy
Controlling feed digestion in pigs to remove the need for antimicrobials
Associate Advisor
Other advisors: Professor Eugeni Roura, Professor Mike Gidley
-
Doctor Philosophy
Utilization of non-protein fractions of legumes in the food industry
Associate Advisor
Other advisors: Professor Mike Gidley
Completed supervision
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2025
Doctor Philosophy
Xylo-oligosaccharides, gastrointestinal function and microbiota in broiler chickens
Associate Advisor
Other advisors: Dr Conny Turni, Dr Lida Omaleki, Professor Eugeni Roura
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2024
Doctor Philosophy
Wattleseeds for nutritional foods
Associate Advisor
Other advisors: Professor Mike Gidley
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2024
Doctor Philosophy
Microbiota interactions and functionality in response to nut consumption and in vitro fermentation
Associate Advisor
Other advisors: Professor Mike Gidley, Dr Deirdre Mikkelsen
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2023
Doctor Philosophy
Dietary fibre concentration and particle size drive in vitro gut microbial fermentation behaviours
Associate Advisor
Other advisors: Dr Deirdre Mikkelsen, Professor Mike Gidley
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2022
Doctor Philosophy
Preparation and characterization of chemically modified wheat starch as a depressant of pyrite and graphite
Associate Advisor
Other advisors: Professor Mike Gidley
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2021
Doctor Philosophy
In Vitro Fermentation of Insoluble Dietary Fibers and Undigested Fractions from Plant Food Sources
Associate Advisor
Other advisors: Dr Deirdre Mikkelsen, Professor Mike Gidley
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2021
Doctor Philosophy
In vitro gut microbial fermentation of models for plant dietary fibre
Associate Advisor
Other advisors: Dr Deirdre Mikkelsen, Professor Mike Gidley
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2019
Doctor Philosophy
BACTERIAL MEDIATED ENZYMATIC METABOLISM OF ARABINOXYLAN AND GALACTOXYLOGLUCAN UNDER IN VITRO FERMENTATION CONDITIONS
Associate Advisor
Other advisors: Dr Deirdre Mikkelsen, Professor Mike Gidley
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2012
Doctor Philosophy
Mechanisms behind the cholesterol-reducing effect of cereal soluble dietary fibres: (1,3:1,4) beta glucan & arabinoxylan
Associate Advisor
Other advisors: Professor Mike Gidley
Media
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