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2025 Book Genetics and analysis of quantitative traits: foundationsWalsh, Bruce, Visscher, Peter M. and Lynch, Michael (2025). Genetics and analysis of quantitative traits: foundations. 2nd ed. Oxford, United Kingdom: Oxford University Press. doi: 10.1093/oso/9780192898180.001.0001 |
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2024 Journal Article Radiogenomics pilot study: association between radiomics and single nucleotide polymorphism-based microarray copy number variation in diagnosing renal oncocytoma and chromophobe renal cell carcinomaAlhussaini, Abeer J., Veluchamy, Abirami, Jawli, Adel, Kernohan, Neil, Tang, Benjie, Palmer, Colin N. A., Steele, J. Douglas and Nabi, Ghulam (2024). Radiogenomics pilot study: association between radiomics and single nucleotide polymorphism-based microarray copy number variation in diagnosing renal oncocytoma and chromophobe renal cell carcinoma. International Journal of Molecular Sciences, 25 (23) 12512, 1-29. doi: 10.3390/ijms252312512 |
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2024 Journal Article Distinct genetic liability profiles define clinically relevant patient strata across common diseasesTrastulla, Lucia, Dolgalev, Georgii, Moser, Sylvain, Jiménez-Barrón, Laura T., Andlauer, Till F. M., von Scheidt, Moritz, Ruderfer, Douglas M., Ripke, Stephan, McQuillin, Andrew, Stahl, Eli A., Domenici, Enrico, Adolfsson, Rolf, Agartz, Ingrid, Agerbo, Esben, Albus, Margot, Alexander, Madeline, Amin, Farooq, Bacanu, Silviu A., Begemann, Martin, Belliveau, Richard A., Bene, Judit, Bergen, Sarah E., Bevilacqua, Elizabeth, Bigdeli, Tim B., Black, Donald W., Blackwood, Douglas H. R., Borglum, Anders D., Bramon, Elvira, Bruggeman, Richard ... Ziller, Michael J. (2024). Distinct genetic liability profiles define clinically relevant patient strata across common diseases. Nature Communications, 15 (1) 5534, 1-28. doi: 10.1038/s41467-024-49338-2 |
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2024 Conference Publication Distinct genetic profiles influence body mass index between infancy and adolescenceWang, Geng, McEwan, Samuel, Zeng, Jian, Haile-Mariam, Mekonnen, Yengo, Loic, Goddard, Michael, Kemper, Kathryn and Warrington, Nicole (2024). Distinct genetic profiles influence body mass index between infancy and adolescence. 57th European Society of Human Genetics (ESHG) Conference, Berlin, Germany, 1-4 June 2024. London, United Kingdom: Nature Publishing Group. |
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2024 Journal Article Development and external validation of multivariable risk models to predict incident and resolved neuropathic pain: a DOLORisk Dundee study (vol 270, pg 1076, 2022)Hebert, Harry L., Veluchamy, Abirami, Baskozos, Georgios, Fardo, Francesca, Van Ryckeghem, Dimitri, Pearson, Ewan R., Colvin, Lesley A., Crombez, Geert, Bennett, David L. H., Meng, Weihua, Palmer, Colin N. A. and Smith, Blair H. (2024). Development and external validation of multivariable risk models to predict incident and resolved neuropathic pain: a DOLORisk Dundee study (vol 270, pg 1076, 2022). Journal of Neurology, 271 (12), 7652-7653. doi: 10.1007/s00415-024-12721-6 |
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2024 Conference Publication Using Polygenic Risk Scores to Characterise Antidepressant Treatment Response in the Australian Genetics of Depression StudyMitchell, Brittany L., Martin, Nicholas G., Medland, Sarah E. and Wray, Naomi R. (2024). Using Polygenic Risk Scores to Characterise Antidepressant Treatment Response in the Australian Genetics of Depression Study. 54th Annual Meeting of the Behavior-Genetics-Association (BGA), London England, Jun 26-29, 2024. NEW YORK: SPRINGER. |
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2024 Journal Article The importance of family-based sampling for biobanksDavies, Neil M., Hemani, Gibran, Neiderhiser, Jenae M., Martin, Hilary C., Mills, Melinda C., Visscher, Peter M., Yengo, Loïc, Young, Alexander Strudwick and Keller, Matthew C. (2024). The importance of family-based sampling for biobanks. Nature, 634 (8035), 795-803. doi: 10.1038/s41586-024-07721-5 |
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2024 Journal Article Genetic architecture reconciles linkage and association studies of complex traitsSidorenko, Julia, Couvy-Duchesne, Baptiste, Kemper, Kathryn E., Moen, Gunn-Helen, Bhatta, Laxmi, Åsvold, Bjørn Olav, Mägi, Reedik, Estonian Biobank Research Team, Ani, Alireza, Wang, Rujia, Nolte, Ilja M., Lifelines Cohort Study, Nolte, Ilja M., Gordon, Scott, Hayward, Caroline, Campbell, Archie, Benjamin, Daniel J., Cesarini, David, Evans, David M., Goddard, Michael E., Haley, Chris S., Porteous, David, Medland, Sarah E., Martin, Nicholas G., Snieder, Harold, Metspalu, Andres, Hveem, Kristian, Brumpton, Ben, Visscher, Peter M. and Yengo, Loic (2024). Genetic architecture reconciles linkage and association studies of complex traits. Nature Genetics, 56 (11), 2352-2360. doi: 10.1038/s41588-024-01940-2 |
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2024 Conference Publication Genome-wide Fine-mapping Improves Identification Of Causal VariantsZeng, Jian, Wu, Yang, Zheng, Zhili, Thibaut, Loic, Goddard, Michael, Wray, Naomi and Visscher, Peter (2024). Genome-wide Fine-mapping Improves Identification Of Causal Variants. World Congress of Psychiatric Genetics WCPG 2024, Singapore, 15-19 October 2024. Amsterdam, Netherlands: Elsevier. doi: 10.1016/j.euroneuro.2024.08.037 |
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2024 Journal Article Carbonate mud production in lakes is driven by degradation of microbial substancesBoussagol, P., Vennin, E., Monna, F., Millet, L., Bonnotte, A., Motreuil, S., Bundeleva, I., Rius, D. and Visscher, P. T. (2024). Carbonate mud production in lakes is driven by degradation of microbial substances. Communications Earth & Environment, 5 (1) 533. doi: 10.1038/s43247-024-01709-9 |
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2024 Journal Article The eukaryome of modern microbialites reveals distinct colonization across aquatic ecosystemsBonacolta, Anthony M., Visscher, Pieter T., del Campo, Javier and White III, Richard Allen (2024). The eukaryome of modern microbialites reveals distinct colonization across aquatic ecosystems. npj Biofilms and Microbiomes, 10 (1) 78, 1-11. doi: 10.1038/s41522-024-00547-z |
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2024 Journal Article Pyritic stromatolites from the Paleoarchean Dresser Formation, Pilbara Craton: resolving biogenicity and hydrothermally influenced ecosystem dynamicsBaumgartner, Raphael J., Van Kranendonk, Martin J., Caruso, Stefano, Campbell, Kathleen A., Dobson, Michaela J., Teece, Bronwyn L., Verrall, Michael, Homann, Martin, Lalonde, Stefan and Visscher, Pieter T. (2024). Pyritic stromatolites from the Paleoarchean Dresser Formation, Pilbara Craton: resolving biogenicity and hydrothermally influenced ecosystem dynamics. Geobiology, 22 (4) e12610, 1-26. doi: 10.1111/gbi.12610 |
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2024 Journal Article Genetic influence on within-person longitudinal change in anthropometric traits in the UK BiobankKemper, Kathryn E., Sidorenko, Julia, Wang, Huanwei, Hayes, Ben J., Wray, Naomi R., Yengo, Loic, Keller, Matthew C., Goddard, Michael and Visscher, Peter M. (2024). Genetic influence on within-person longitudinal change in anthropometric traits in the UK Biobank. Nature Communications, 15 (1) 3776, 3776. doi: 10.1038/s41467-024-47802-7 |
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2024 Journal Article Leveraging functional genomic annotations and genome coverage to improve polygenic prediction of complex traits within and between ancestriesZheng, Zhili, Liu, Shouye, Sidorenko, Julia, Wang, Ying, Lin, Tian, Yengo, Loic, Turley, Patrick, Ani, Alireza, Wang, Rujia, Nolte, Ilja M., Snieder, Harold, Aguirre-Gamboa, Raul, Deelen, Patrick, Franke, Lude, Kuivenhoven, Jan A., Lopera Maya, Esteban A., Sanna, Serena, Swertz, Morris A., Vonk, Judith M., Wijmenga, Cisca, Yang, Jian, Wray, Naomi R., Goddard, Michael E., Visscher, Peter M., Zeng, Jian and LifeLines Cohort Study (2024). Leveraging functional genomic annotations and genome coverage to improve polygenic prediction of complex traits within and between ancestries. Nature Genetics, 56 (5), 1-11. doi: 10.1038/s41588-024-01704-y |
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2024 Journal Article Genome-wide analysis in over 1 million individuals of European ancestry yields improved polygenic risk scores for blood pressure traitsKeaton, Jacob M., Kamali, Zoha, Xie, Tian, Vaez, Ahmad, Williams, Ariel, Goleva, Slavina B., Ani, Alireza, Evangelou, Evangelos, Hellwege, Jacklyn N., Yengo, Loic, Young, William J., Traylor, Matthew, Giri, Ayush, Zheng, Zhili, Zeng, Jian, Chasman, Daniel I., Morris, Andrew P., Caulfield, Mark J., Hwang, Shih-Jen, Kooner, Jaspal S., Conen, David, Attia, John R., Morrison, Alanna C., Loos, Ruth J. F., Kristiansson, Kati, Schmidt, Reinhold, Hicks, Andrew A., Pramstaller, Peter P., Nelson, Christopher P. ... ICBP Consortium (2024). Genome-wide analysis in over 1 million individuals of European ancestry yields improved polygenic risk scores for blood pressure traits. Nature Genetics, 56 (5), 1-14. doi: 10.1038/s41588-024-01714-w |
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2024 Journal Article Genome-wide studies reveal genetic risk factors for hepatic fat contentLi, Yanni, Van Den Berg, Eline H., Kurilshikov, Alexander, Zhernakova, Dasha V., Lifelines Cohort Study, Gacesa, Ranko, Hu, Shixian, Lopera-Maya, Esteban A., Zhernakova, Alexandra, Aguirre-Gamboa, Raul, Deelen, Patrick, Franke, Lude, Kuivenhoven, Jan A., Lopera-Maya, Esteban A., Nolte, Ilja M., Sanna, Serena, Snieder, Harold, Swertz, Morris A., Visscher, Peter M. (Lifelines Cohort Study group member), Vonk, Judith M., Wijmenga, Cisca, De Meijer, Vincent E., Sanna, Serena, Dullaart, Robin P. F., Blokzijl, Hans, Festen, Eleonora A. M., Fu, Jingyuan and Weersma, Rinse K. (2024). Genome-wide studies reveal genetic risk factors for hepatic fat content. Genomics, Proteomics and Bioinformatics, 22 (2) qzae031, 1-12. doi: 10.1093/gpbjnl/qzae031 |
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2024 Journal Article Genetic control of DNA methylation is largely shared across European and East Asian populationsHatton, Alesha A., Cheng, Fei-Fei, Lin, Tian, Shen, Ren-Juan, Chen, Jie, Zheng, Zhili, Qu, Jia, Lyu, Fan, Harris, Sarah E., Cox, Simon R., Jin, Zi-Bing, Martin, Nicholas G., Fan, Dongsheng, Montgomery, Grant W., Yang, Jian, Wray, Naomi R., Marioni, Riccardo E., Visscher, Peter M. and McRae, Allan F. (2024). Genetic control of DNA methylation is largely shared across European and East Asian populations. Nature Communications, 15 (1) 2713, 1-12. doi: 10.1038/s41467-024-47005-0 |
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2024 Journal Article Unravelling the complex causal effects of substance use behaviours on common diseasesXue, Angli, Zhu, Zhihong, Wang, Huanwei, Jiang, Longda, Visscher, Peter M., Zeng, Jian and Yang, Jian (2024). Unravelling the complex causal effects of substance use behaviours on common diseases. Communications Medicine, 4 (1) 43, 1-13. doi: 10.1038/s43856-024-00473-3 |
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2024 Journal Article Host genetic regulation of human gut microbial structural variationZhernakova, Daria V., Wang, Daoming, Liu, Lei, Andreu-Sánchez, Sergio, Zhang, Yue, Ruiz-Moreno, Angel J., Peng, Haoran, Plomp, Niels, Del Castillo-Izquierdo, Ángela, Gacesa, Ranko, Lopera-Maya, Esteban A., Temba, Godfrey S., Kullaya, Vesla I., van Leeuwen, Sander S., Aguirre-Gamboa, Raul, Deelen, Patrick, Franke, Lude, Kuivenhoven, Jan A., Nolte, Ilja M., Sanna, Serena, Snieder, Harold, Swertz, Morris A., Visscher, Peter M., Vonk, Judith M., Xavier, Ramnik J., de Mast, Quirijn, Joosten, Leo A. B., Riksen, Niels P., Rutten, Joost H. W. ... Fu, Jingyuan (2024). Host genetic regulation of human gut microbial structural variation. Nature, 625 (7996), 813-821. doi: 10.1038/s41586-023-06893-w |
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2024 Journal Article Erratum: autism-related dietary preferences mediate autism-gut microbiome associationsYap, Chloe X., Henders, Anjali K., Alvares, Gail A., Wood, David L.A., Krause, Lutz, Tyson, Gene W., Restuadi, Restuadi, Wallace, Leanne, McLaren, Tiana, Hansell, Narelle K., Cleary, Dominique, Grove, Rachel, Hafekost, Claire, Harun, Alexis, Holdsworth, Helen, Jellett, Rachel, Khan, Feroza, Lawson, Lauren P., Leslie, Jodie, Frenk, Mira Levis, Masi, Anne, Mathew, Nisha E., Muniandy, Melanie, Nothard, Michaela, Miller, Jessica L., Nunn, Lorelle, Holtmann, Gerald, Strike, Lachlan T., de Zubicaray, Greig I. ... Gratten, Jacob (2024). Erratum: autism-related dietary preferences mediate autism-gut microbiome associations. Cell, 187 (2), 495-510. doi: 10.1016/j.cell.2023.12.001 |
