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2024 Journal Article The distribution of fitness effects during adaptive walks using a simple genetic networkO’Brien, Nicholas L. V., Holland, Barbara, Engelstädter, Jan and Ortiz-Barrientos, Daniel (2024). The distribution of fitness effects during adaptive walks using a simple genetic network. PLOS Genetics, 20 (5) e1011289, e1011289. doi: 10.1371/journal.pgen.1011289 |
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2024 Journal Article Belt and braces: Two escape ways to maintain the cassette reservoir of large chromosomal integronsRichard, Egill, Darracq, Baptiste, Littner, Eloi, Millot, Gael A., Conte, Valentin, Cokelaer, Thomas, Engelstädter, Jan, Rocha, Eduardo P.C., Mazel, Didier and Loot, Céline (2024). Belt and braces: Two escape ways to maintain the cassette reservoir of large chromosomal integrons. PLoS Genetics, 20 (4) e1011231. doi: 10.1371/journal.pgen.1011231 |
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2023 Journal Article Frequent, infinitesimal bottlenecks maximize the rate of microbial adaptationDelaney, Oscar, Letten, Andrew D and Engelstadter, Jan (2023). Frequent, infinitesimal bottlenecks maximize the rate of microbial adaptation. Genetics, 225 (4) iyad185. doi: 10.1093/genetics/iyad185 |
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2023 Journal Article Host phylogeny and ecological associations best explain Wolbachia host shifts in scale insectsSanaei, Ehsan, Albery, Gregory F., Yeoh, Yun Kit, Lin, Yen‐Po, Cook, Lyn G. and Engelstädter, Jan (2023). Host phylogeny and ecological associations best explain Wolbachia host shifts in scale insects. Molecular Ecology, 32 (9), 2351-2363. doi: 10.1111/mec.16883 |
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2023 Journal Article Antidepressants can induce mutation and enhance persistence toward multiple antibioticsWang, Yue, Yu, Zhigang, Ding, Pengbo, Lu, Ji, Mao, Likai, Ngiam, Lyman, Yuan, Zhiguo, Engelstädter, Jan, Schembri, Mark A. and Guo, Jianhua (2023). Antidepressants can induce mutation and enhance persistence toward multiple antibiotics. Proceedings of the National Academy of Sciences, 120 (5) e2208344120, 1-12. doi: 10.1073/pnas.2208344120 |
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2022 Journal Article Genetic slippage after sex maintains diversity for parasite resistance in a natural host populationAmeline, Camille, Voegtli, Felix, Andras, Jason, Dexter, Eric, Engelstädter, Jan and Ebert, Dieter (2022). Genetic slippage after sex maintains diversity for parasite resistance in a natural host population. Science Advances, 8 (46) eabn0051, 1-15. doi: 10.1126/sciadv.abn0051 |
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2022 Journal Article The evolution of a specialized, highly virulent fish pathogen through gene loss and acquisition of host-specific survival mechanismsBaseggio, Laura, Rudenko, Oleksandra, Engelstädter, Jan and Barnes, Andrew C. (2022). The evolution of a specialized, highly virulent fish pathogen through gene loss and acquisition of host-specific survival mechanisms. Applied and Environmental Microbiology, 88 (14) e0022222, 1-19. doi: 10.1128/aem.00222-22 |
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2022 Journal Article Cytoplasmic incompatibility in hybrid zones: infection dynamics and resistance evolutionRøed, Erik Sandertun and Engelstädter, Jan (2022). Cytoplasmic incompatibility in hybrid zones: infection dynamics and resistance evolution. Journal of Evolutionary Biology, 35 (2), 240-253. doi: 10.1111/jeb.13974 |
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2021 Journal Article Wolbachia in scale insects: a distinct pattern of infection frequencies and potential transfer routes via ant associatesSanaei, Ehsan, Lin, Yen‐Po, Cook, Lyn G. and Engelstädter, Jan (2021). Wolbachia in scale insects: a distinct pattern of infection frequencies and potential transfer routes via ant associates. Environmental Microbiology, 24 (3), 1326-1339. doi: 10.1111/1462-2920.15833 |
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2021 Journal Article Phenotypic and genotypic parallel evolution in parapatric ecotypes of SenecioJames, Maddie E., Wilkinson, Melanie J., Bernal, Diana M., Liu, Huanle, North, Henry L., Engelstädter, Jan and Ortiz‐Barrientos, Daniel (2021). Phenotypic and genotypic parallel evolution in parapatric ecotypes of Senecio. Evolution, 75 (12), 3115-3131. doi: 10.1111/evo.14387 |
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2021 Journal Article Correction: Non-antibiotic pharmaceuticals enhance the transmission of exogenous antibiotic resistance genes through bacterial transformationWang, Yue, Lu, Ji, Engelstädter, Jan, Zhang, Shuai, Ding, Pengbo, Mao, Likai, Yuan, Zhiguo, Bond, Philip L. and Guo, Jianhua (2021). Correction: Non-antibiotic pharmaceuticals enhance the transmission of exogenous antibiotic resistance genes through bacterial transformation. The ISME Journal, 16 (2), 612-612. doi: 10.1038/s41396-021-01074-x |
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2021 Journal Article Highly replicated evolution of parapatric ecotypesJames, Maddie E., Arenas-Castro, Henry, Groh, Jeffrey S., Allen, Scott L., Engelstädter, Jan and Ortiz-Barrientos, Daniel (2021). Highly replicated evolution of parapatric ecotypes. Molecular Biology and Evolution, 38 (11), 4805-4821. doi: 10.1093/molbev/msab207 |
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2021 Journal Article Complete, closed and curated genome sequences of Photobacterium damselae subsp. piscicida isolates from Australia indicate mobilome-driven localized evolution and novel pathogenicity determinantsBaseggio, Laura, Rudenko, Oleksandra, Buller, Nicky, Landos, Matt, Englestädter, Jan and Barnes, Andrew C. (2021). Complete, closed and curated genome sequences of Photobacterium damselae subsp. piscicida isolates from Australia indicate mobilome-driven localized evolution and novel pathogenicity determinants. Microbial Genomics, 7 (4) 000562, 1-14. doi: 10.1099/mgen.0.000562 |
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2020 Journal Article A Two-Locus System with Strong Epistasis Underlies Rapid Parasite-Mediated Evolution of Host ResistanceAmeline, Camille, Bourgeois, Yann, Vögtli, Felix, Savola, Eevi, Andras, Jason, Engelstädter, Jan and Ebert, Dieter (2020). A Two-Locus System with Strong Epistasis Underlies Rapid Parasite-Mediated Evolution of Host Resistance. Molecular Biology and Evolution, 38 (4), 1512-1528. doi: 10.1093/molbev/msaa311 |
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2020 Journal Article Evolutionary epidemiology of Streptococcus iniae: linking mutation rate dynamics with adaptation to novel immunological landscapesRudenko, Oleksandra, Engelstädter, Jan and Barnes, Andrew C. (2020). Evolutionary epidemiology of Streptococcus iniae: linking mutation rate dynamics with adaptation to novel immunological landscapes. Infection, Genetics and Evolution, 85 104435, 104435. doi: 10.1016/j.meegid.2020.104435 |
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2020 Journal Article Wolbachia host shifts: routes, mechanisms, constraints and evolutionary consequencesSanaei, Ehsan, Charlat, Sylvain and Engelstädter, Jan (2020). Wolbachia host shifts: routes, mechanisms, constraints and evolutionary consequences. Biological Reviews, 96 (2) brv.12663, 433-453. doi: 10.1111/brv.12663 |
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2020 Journal Article Non-antibiotic pharmaceuticals enhance the transmission of exogenous antibiotic resistance genes through bacterial transformationWang, Yue, Lu, Ji, Engelstädter, Jan, Zhang, Shuai, Ding, Pengbo, Mao, Likai, Yuan, Zhiguo, Bond, Philip L. and Guo, Jianhua (2020). Non-antibiotic pharmaceuticals enhance the transmission of exogenous antibiotic resistance genes through bacterial transformation. The ISME Journal: multidisciplinary journal of microbial ecology, 14 (8), 2179-2196. doi: 10.1038/s41396-020-0679-2 |
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2019 Journal Article Science policies: how should science funding be allocated? An evolutionary biologists’ perspectiveMeirmans, Stephanie, Butlin, Roger K., Charmantier, Anne, Engelstädter, Jan, Groot, Astrid T., King, Kayla C., Kokko, Hanna, Reid, Jane M. and Neiman, Maurine (2019). Science policies: how should science funding be allocated? An evolutionary biologists’ perspective. Journal of Evolutionary Biology, 32 (8) jeb.13497, 754-768. doi: 10.1111/jeb.13497 |
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2019 Journal Article The dynamics of preferential host switching: host phylogeny as a key predictor of parasite distributionEngelstädter, Jan and Fortuna, Nicole Z. (2019). The dynamics of preferential host switching: host phylogeny as a key predictor of parasite distribution. Evolution, 73 (7) evo.13716, 1330-1340. doi: 10.1111/evo.13716 |
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2018 Journal Article Strikingly high levels of heterozygosity despite 20 years of inbreeding in a clonal honey beeSmith, Nicholas M. A., Wade, Claire, Allsopp, Michael H., Harpur, Brock A., Zayed, Amro, Rose, Stephen A., Engelstädter, Jan, Chapman, Nadine C., Yagound, Boris and Oldroyd, Benjamin P. (2018). Strikingly high levels of heterozygosity despite 20 years of inbreeding in a clonal honey bee. Journal of Evolutionary Biology, 32 (2) jeb.13397, 144-152. doi: 10.1111/jeb.13397 |
