Overview
Background
Dr Shrapnel is an Associate Professor in Physics and Deputy Director at the ARC Centre of Excellence for Engineered Quantum Systems, where she works on topics in Quantum Machine Learning and Quantum Foundations. She is also a registered medical practitioner with over 20 years experience and currently leads the Quantum Technologies for Health Program for the Queensland Digital Health Centre. Her research combines theory, methodology, and applications across a broad range of disciplines.
Availability
- Associate Professor Sally Shrapnel is:
- Available for supervision
Fields of research
Qualifications
- Bachelor of Medical Science, The University of Queensland
- Bachelor of Medicine and Surgery and Medical Science, The University of Queensland
- Masters (Coursework) of Science, Imperial College
- Doctor of Philosophy, The University of Queensland
Works
Search Professor Sally Shrapnel’s works on UQ eSpace
2024
Journal Article
At-admission prediction of mortality and pulmonary embolism in an international cohort of hospitalised patients with COVID-19 using statistical and machine learning methods
Mesinovic, Munib, Wong, Xin Ci, Rajahram, Giri Shan, Citarella, Barbara Wanjiru, Peariasamy, Kalaiarasu M., van Someren Greve, Frank, Olliaro, Piero, Merson, Laura, Clifton, Lei, Kartsonaki, Christiana, Abdukahil, Sheryl Ann, Abdulkadir, Nurul Najmee, Abe, Ryuzo, Abel, Laurent, Abrous, Amal, Absil, Lara, Acker, Andrew, Adachi, Shingo, Adam, Elisabeth, Adriano, Enrico, Adrião, Diana, Ageel, Saleh Al, Ahmed, Shakeel, Aiello, Marina, Ainscough, Kate, Airlangga, Eka, Aisa, Tharwat, Hssain, Ali Ait, Tamlihat, Younes Ait ... Zucman, David (2024). At-admission prediction of mortality and pulmonary embolism in an international cohort of hospitalised patients with COVID-19 using statistical and machine learning methods. Scientific Reports, 14 (1) 16387. doi: 10.1038/s41598-024-63212-7
2024
Journal Article
Implementing AI in Hospitals to Achieve a Learning Health System: Systematic Review of Current Enablers and Barriers
Kamel Rahimi, Amir, Pienaar, Oliver, Ghadimi, Moji, Canfell, Oliver J., Pole, Jason D., Shrapnel, Sally, van der Vegt, Anton H. and Sullivan, Clair (2024). Implementing AI in Hospitals to Achieve a Learning Health System: Systematic Review of Current Enablers and Barriers. Journal of Medical Internet Research, 26 e49655, 1-29. doi: 10.2196/49655
2024
Journal Article
Characteristics and outcomes of COVID-19 patients admitted to hospital with and without respiratory symptoms
Citarella, Barbara Wanjiru, Kartsonaki, Christiana, Ibáñez-Prada, Elsa D., Gonçalves, Bronner P., Baruch, Joaquin, Escher, Martina, Pritchard, Mark G., Wei, Jia, Philippy, Fred, Dagens, Andrew, Hall, Matthew, Lee, James, Kutsogiannis, Demetrios James, Wils, Evert-Jan, Fernandes, Marília Andreia, Tirupakuzhi Vijayaraghavan, Bharath Kumar, Panda, Prasan Kumar, Martin-Loeches, Ignacio, Ohshimo, Shinichiro, Fatoni, Arie Zainul, Horby, Peter, Dunning, Jake, Rello, Jordi, Merson, Laura, Rojek, Amanda, Vaillant, Michel, Olliaro, Piero, Reyes, Luis Felipe, Moharam, S.A. ... Zucman, David (2024). Characteristics and outcomes of COVID-19 patients admitted to hospital with and without respiratory symptoms. Heliyon, 10 (10) e29591, e29591. doi: 10.1016/j.heliyon.2024.e29591
2024
Conference Publication
Validation Of The Extended Kdigo Definition To Diagnose Acute Kidney Injury In A General Hospital Population Using The Mimic-IV Dataset
Wainstein, Marina, Edward, Eleanor, Spyrison, Nicholas, Rahimi, Amir Kamel, Ghadimi, Moji, Johnson, David and Shrapnel, Sally (2024). Validation Of The Extended Kdigo Definition To Diagnose Acute Kidney Injury In A General Hospital Population Using The Mimic-IV Dataset. ISN World Congress of Nephrology (WCN) 2024, Buenos Aires, Argentina, 13-16 April 2024. New York, NY United States: Elsevier. doi: 10.1016/j.ekir.2024.02.537
2024
Journal Article
Quantum kernel evaluation via Hong-Ou-Mandel interference
Bowie, Cassandra, Shrapnel, Sally and Kewming, Michael (2024). Quantum kernel evaluation via Hong-Ou-Mandel interference. Quantum Science and Technology, 9 (1) 015001, 1-10. doi: 10.1088/2058-9565/acfba9
2024
Book Chapter
Artificial intelligence for diabetes in the hospital
Sly, Benjamin P., Shrapnel, Sally and Sullivan, Clair M. (2024). Artificial intelligence for diabetes in the hospital. Diabetes digital health, telehealth, and artificial intelligence. (pp. 353-366) edited by David C. Klonoff, David Kerr and Juan C. Espinoza. London, United Kingdom: Elsevier. doi: 10.1016/b978-0-443-13244-5.00021-3
2023
Conference Publication
A Systematic Review of Externally Validated Machine Learning Models for Predicting AKI in General Hospital Patients
Wainstein, Marina, Flanagan, Emily K., Johnson, David W. and Shrapnel, Sally (2023). A Systematic Review of Externally Validated Machine Learning Models for Predicting AKI in General Hospital Patients. Kidney Week, Philadelphia, PA United States, 1-5 November 2023. Philadelphia, PA United States: Lippincott Williams & Wilkins. doi: 10.1681/asn.20233411s11066a
2023
Journal Article
Machine learning clinical prediction models for acute kidney injury: the impact of baseline creatinine on prediction efficacy
Kamel Rahimi, Amir, Ghadimi, Moji, van der Vegt, Anton H., Canfell, Oliver J., Pole, Jason D., Sullivan, Clair and Shrapnel, Sally (2023). Machine learning clinical prediction models for acute kidney injury: the impact of baseline creatinine on prediction efficacy. BMC Medical Informatics and Decision Making, 23 (1) 207, 1-14. doi: 10.1186/s12911-023-02306-0
2023
Journal Article
Major adverse cardiovascular events (MACE) in patients with severe COVID-19 registered in the ISARIC WHO clinical characterization protocol: A prospective, multinational, observational study
Reyes, Luis Felipe, Garcia-Gallo, Esteban, Murthy, Srinivas, Fuentes, Yuli V., Serrano, Cristian C., Ibáñez-Prada, Elsa D., Lee, James, Rojek, Amanda, Citarella, Barbara Wanjiru, Gonçalves, Bronner P., Dunning, Jake, Rätsep, Indrek, Viñan-Garces, Andre Emilio, Kartsonaki, Christiana, Rello, Jordi, Martin-Loeches, Ignacio, Shankar-Hari, Manu, Olliaro, Piero L., Merson, Laura, Abbas, Ali, Abdukahil, Sheryl Ann, Abdulkadir, Nurul Najmee, Abe, Ryuzo, Abebrese, Franklina Korkor, Abel, Laurent, Abrous, Amal, Absil, Lara, Acharya, Subhash, Acker, Andrew ... Zucman, David (2023). Major adverse cardiovascular events (MACE) in patients with severe COVID-19 registered in the ISARIC WHO clinical characterization protocol: A prospective, multinational, observational study. Journal of Critical Care, 77 154318. doi: 10.1016/j.jcrc.2023.154318
2023
Journal Article
A multi-country analysis of COVID-19 hospitalizations by vaccination status
Gonçalves, Bronner P., Jassat, Waasila, Baruch, Joaquín, Hashmi, Madiha, Rojek, Amanda, Dasgupta, Abhishek, Martin-Loeches, Ignacio, Reyes, Luis Felipe, Piubelli, Chiara, Citarella, Barbara Wanjiru, Kartsonaki, Christiana, Lefèvre, Benjamin, López Revilla, José W., Lunn, Miles, Harrison, Ewen M., Kraemer, Moritz U. G., Shrapnel, Sally, Horby, Peter, Bisoffi, Zeno, Olliaro, Piero L, Merson, Laura, ISARIC Clinical Characterisation Group and Ghadimi, Moji (2023). A multi-country analysis of COVID-19 hospitalizations by vaccination status. Med, 4 (11), 797-812.e2. doi: 10.1016/j.medj.2023.08.005
2023
Journal Article
Validation of extracorporeal membrane oxygenation mortality prediction and severity of illness scores in an international COVID-19 cohort
Shah, Neel, Xue, Bing, Xu, Ziqi, Yang, Hanqing, Marwali, Eva, Dalton, Heidi, Payne, Philip P. R., Lu, Chenyang, Said, Ahmed S., Abdukahil, Sheryl Ann, Abdulkadir, Nurul Najmee, Absil, Lara, Acker, Andrew, Adrião, Diana, Hssain, Ali Ait, Akwani, Chika, Al Qasim, Eman, Alalqam, Razi, Al-dabbous, Tala, Alex, Beatrice, Al-Fares, Abdulrahman, Alfoudri, Huda, Aliudin, Jeffrey, Alves, João, Alves, Rita, Alves, João Melo, Cabrita, Joana Alves, Amaral, Maria, Amira, Nur ... ISARIC Clinical Characterisation Group (2023). Validation of extracorporeal membrane oxygenation mortality prediction and severity of illness scores in an international COVID-19 cohort. Artificial Organs, 47 (9), 1490-1502. doi: 10.1111/aor.14542
2023
Journal Article
Liver injury in hospitalized patients with COVID-19: An International observational cohort study
Vijayaraghavan, Bharath Kumar Tirupakuzhi, Bishnu, Saptarshi, Baruch, Joaquin, Citarella, Barbara Wanjiru, Kartsonaki, Christiana, Meeyai, Aronrag, Mohamed, Zubair, Ohshimo, Shinichiro, Lefèvre, Benjamin, Al-Fares, Abdulrahman, Calvache, Jose A., Taccone, Fabio Silvio, Olliaro, Piero, Merson, Laura, Adhikari, Neill K.J., Abdukahil, Sheryl Ann, Abdulkadir, Nurul Najmee, Abe, Ryuzo, Abel, Laurent, Abrous, Amal, Absil, Lara, Acker, Andrew, Adam, Elisabeth, Adrião, Diana, Al Ageel, Saleh, Ainscough, Kate, Hssain, Ali Ait, Tamlihat, Younes Ait, Akimoto, Takako ... the ISARIC Clinical Characterisation Group (2023). Liver injury in hospitalized patients with COVID-19: An International observational cohort study. PLoS One, 18 (9 September) e0277859, 1-17. doi: 10.1371/journal.pone.0277859
2023
Journal Article
Physical grounds for causal perspectivalism
Milburn, Gerard J., Shrapnel, Sally and Evans, Peter W. (2023). Physical grounds for causal perspectivalism. Entropy, 25 (8) 1190, 1-24. doi: 10.3390/e25081190
2023
Journal Article
Systematic review of externally validated machine learning models for predicting acute kidney injury in general hospital patients
Wainstein, Marina, Flanagan, Emily, Johnson, David W. and Shrapnel, Sally (2023). Systematic review of externally validated machine learning models for predicting acute kidney injury in general hospital patients. Frontiers in Nephrology, 3 1220214, 1-9. doi: 10.3389/fneph.2023.1220214
2023
Journal Article
Association of country income level with the characteristics and outcomes of critically ill patients hospitalized with acute kidney injury and COVID-19
Wainstein, Marina, Spyrison, Nicholas, Dai, Danyang, Ghadimi, Moji, Chavez-Iniquez, Jonathan Samuel, Rizo Topete, Lilia María, Citarella, Barbara Wanjiru, Merson, Laura, Pole, Jason, Claure-Del Granado, Rolando, Johnson, David W., Shrapnel, Sally, Abdukahil, heryl Ann, Abdulkadir, Nurul Najmee, Abe, Ryuzo, Abel, Laurent, Abrous, Amal, Absil, Lara, Acker, Andrew, Adachi, Shingo, Adrião, Diana, Al Ageel, Saleh, Ahmed, Shakeel, Ainscough, Kate, Airlangga, Eka, Aisa, Tharwat, Hssain, Ali Ait, Tamlihat, Younes Ait, Akimoto, Takako ... ISARIC Characterization Group (2023). Association of country income level with the characteristics and outcomes of critically ill patients hospitalized with acute kidney injury and COVID-19. Kidney International Reports, 8 (8), 1514-1530. doi: 10.1016/j.ekir.2023.05.015
2023
Journal Article
Characteristics and outcomes of an international cohort of 600 000 hospitalized patients with COVID-19
Kartsonaki, Christiana, Baillie, J Kenneth, Barrio, Noelia García, Baruch, Joaquín, Beane, Abigail, Blumberg, Lucille, Bozza, Fernando, Broadley, Tessa, Burrell, Aidan, Carson, Gail, Citarella, Barbara Wanjiru, Dagens, Andrew, Dankwa, Emmanuelle A, Donnelly, Christl A, Dunning, Jake, Elotmani, Loubna, Escher, Martina, Farshait, Nataly, Goffard, Jean-Christophe, Gonçalves, Bronner P, Hall, Matthew, Hashmi, Madiha, Sim Lim Heng, Benedict, Ho, Antonia, Jassat, Waasila, Pedrera Jiménez, Miguel, Laouenan, Cedric, Lissauer, Samantha, Martin-Loeches, Ignacio ... ISARIC Clinical Characterisation Group (2023). Characteristics and outcomes of an international cohort of 600 000 hospitalized patients with COVID-19. International Journal of Epidemiology, 52 (2), 355-376. doi: 10.1093/ije/dyad012
2022
Journal Article
Symptom-based case definitions for COVID-19: Time and geographical variations for detection at hospital admission among 260,000 patients
Baruch, Joaquin, Rojek, Amanda, Kartsonaki, Christiana, Vijayaraghavan, Bharath K. T., Gonçalves, Bronner P., Pritchard, Mark G., Merson, Laura, Dunning, Jake, Hall, Matthew, Sigfrid, Louise, Citarella, Barbara W., Murthy, Srinivas, Yeabah, Trokon O., Olliaro, Piero, Abbas, Ali, Abdukahil, Sheryl Ann, Abdulkadir, Nurul Najmee, Abe, Ryuzo, Abel, Laurent, Absil, Lara, Acharya, Subhash, Acker, Andrew, Adam, Elisabeth, Adrião, Diana, Al Ageel, Saleh, Ahmed, Shakeel, Ainscough, Kate, Airlangga, Eka, Aisa, Tharwat ... Zucman, David (2022). Symptom-based case definitions for COVID-19: Time and geographical variations for detection at hospital admission among 260,000 patients. Influenza and other Respiratory Viruses, 16 (6), 1040-1050. doi: 10.1111/irv.13039
2022
Conference Publication
Validation of UCSD-Mayo Risk Score for Predicting Hospital-Acquired AKI in COVID-19 Patients
Granado, Rolando Claure-Del, Barbosa, Nicholas Y., Wainstein, Marina, Shrapnel, Sally and ISARIC Clinical Characterization Group (2022). Validation of UCSD-Mayo Risk Score for Predicting Hospital-Acquired AKI in COVID-19 Patients. Kidney Week, Orlando, FL United States, 3-6 November 2022. Washington, DC United States: American Society of Nephrology. doi: 10.1681/asn.20223311s1334c
2022
Journal Article
An international observational study to assess the impact of the Omicron variant emergence on the clinical epidemiology of COVID-19 in hospitalised patients
Gonçalves, Bronner P, Hall, Matthew, Jassat, Waasila, Balan, Valeria, Murthy, Srinivas, Kartsonaki, Christiana, Semple, Malcolm G, Rojek, Amanda, Baruch, Joaquín, Reyes, Luis Felipe, Dasgupta, Abhishek, Dunning, Jake, Citarella, Barbara Wanjiru, Pritchard, Mark, Martín-Quiros, Alejandro, Sili, Uluhan, Baillie, J Kenneth, Aryal, Diptesh, Arabi, Yaseen, Rashan, Aasiyah, Angheben, Andrea, Caoili, Janice, Carrier, François Martin, Harrison, Ewen M, Gómez-Junyent, Joan, Figueiredo-Mello, Claudia, Douglas, James Joshua, Mat Nor, Mohd Basri, Chow, Yock Ping ... Suen, Jacky Y. (2022). An international observational study to assess the impact of the Omicron variant emergence on the clinical epidemiology of COVID-19 in hospitalised patients. eLife, 11 ARTN e80556. doi: 10.7554/eLife.80556
2022
Journal Article
Respiratory support in patients with severe COVID-19 in the International Severe Acute Respiratory and Emerging Infection (ISARIC) COVID-19 study: a prospective, multinational, observational study
Reyes, Luis Felipe, Murthy, Srinivas, Garcia-Gallo, Esteban, Merson, Laura, Ibáñez-Prada, Elsa D., Rello, Jordi, Fuentes, Yuli V., Martin-Loeches, Ignacio, Bozza, Fernando, Duque, Sara, Taccone, Fabio S., Fowler, Robert A., Kartsonaki, Christiana, Gonçalves, Bronner P., Citarella, Barbara Wanjiru, Aryal, Diptesh, Burhan, Erlina, Cummings, Matthew J., Delmas, Christelle, Diaz, Rodrigo, Figueiredo-Mello, Claudia, Hashmi, Madiha, Panda, Prasan Kumar, Jiménez, Miguel Pedrera, Rincon, Diego Fernando Bautista, Thomson, David, Nichol, Alistair, Marshall, John C., Olliaro, Piero L. ... Suen, Jacky Y. (2022). Respiratory support in patients with severe COVID-19 in the International Severe Acute Respiratory and Emerging Infection (ISARIC) COVID-19 study: a prospective, multinational, observational study. Critical Care, 26 (1) 276. doi: 10.1186/s13054-022-04155-1
Funding
Current funding
Past funding
Supervision
Availability
- Associate Professor Sally Shrapnel is:
- Available for supervision
Before you email them, read our advice on how to contact a supervisor.
Supervision history
Current supervision
-
Doctor Philosophy
Artificial Intelligence to Improve Clinical Outcomes in Hospitals
Principal Advisor
Other advisors: Professor Clair Sullivan, Dr Oliver Canfell, Professor Jason Pole
-
Doctor Philosophy
Characterising the impact of noise in quantum machine learning.
Principal Advisor
-
Doctor Philosophy
Digital Health Methods for Evaluating Chronic Organ Injuries Resulting from Infectious Epidemics: Acute Kidney Injury post COVID-19 Omicron Surge as an Exemplar
Associate Advisor
Other advisors: Professor Jason Pole
-
Doctor Philosophy
Care of patients with diabetes, in the digital hospital environment: From patient level to systems approach
Associate Advisor
Other advisors: Associate Professor Anthony Russell, Professor Clair Sullivan
-
Doctor Philosophy
Predicting adverse diabetes events in hospitals using machine learning
Associate Advisor
Other advisors: Professor Clair Sullivan, Professor Jason Pole
Completed supervision
-
2024
Doctor Philosophy
Improving Kidney Disease Detection and Risk Prediction Across Diverse Regional and Socioeconomic Settings
Principal Advisor
Other advisors: Professor David Johnson
-
2024
Doctor Philosophy
The Wealth of Features: towards a coherent cooperative game theory for feature importance
Associate Advisor
Other advisors: Dr Ian Wood, Professor Geoffrey McLachlan
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2021
Doctor Philosophy
High-Dimensional Quantum Information
Associate Advisor
Other advisors: Professor Gerard Milburn, Professor Andrew White, Associate Professor Jacqui Romero
Media
Enquiries
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