Overview
Background
I received my PhD (with distinction) in 2014 from the Institute of Biotechnology at the University of Helsinki, Finland, where I studied membrane trafficking using advanced imaging techniques. In 2015, I relocated to the Queensland Brain Institute (QBI) at The University of Queensland (UQ), Brisbane, Australia, for postdoctoral training, shifting my research focus from fundamental cell biology towards neuroscience and super-resolution imaging. I was awarded a three-year Academy of Finland Postdoctoral Fellowship in 2016 and an ARC Discovery Early Career Researcher Award (DECRA) in 2019 to investigate the role of lipid-modifying enzymes in neuronal function. In 2022, I became a UQ Amplify Fellow and established my independent research group at the Australian Institute for Bioengineering and Nanotechnology (AIBN), UQ.
I now lead a laboratory that combines advanced imaging, cell biology, human induced pluripotent stem cell (iPSC) and organoid models, and preclinical disease modelling to understand mechanisms of nervous system health and disease. Our research addresses two interconnected biological questions: i) how lipid metabolism supports neuronal energy metabolism, synaptic function, cognition, learning and memory, and how modulation of neuronal lipid pathways can be harnessed therapeutically in neurological disease; and ii) how genetic and environmental perturbations disrupt cellular homeostasis in rare neurological and neurodevelopmental disorders, and how patient-derived iPSC and organoid models can be used to uncover human-specific disease mechanisms and develop and evaluate new therapeutic strategies.
More broadly, we investigate how fundamental cellular processes, including membrane trafficking, lipid metabolism and organelle function, are exploited or disrupted across inherited neurological disorders, neuroparalytic diseases caused by bacterial toxins, and infectious diseases caused by neurotropic and respiratory viruses. By integrating mechanistic discovery with human disease modelling and therapeutic development, our goal is to identify convergent disease mechanisms and translate them into new opportunities for intervention.
Availability
- Dr Merja Joensuu is:
- Available for supervision
- Media expert
Fields of research
Qualifications
- Doctor of Philosophy, University of Helsinki*
Research interests
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Neuronal Fatty Acid Energy Metabolism
Neuronal fatty acid metabolism and lipid-derived energy pathways in brain function and disease. My research investigates how fatty acids support neuronal energy production and function. I discovered a Ddhd2-regulated pathway that supplies saturated fatty acids for mitochondrial ATP generation, challenging the glucose-centric view of brain metabolism. My work integrates human iPSC and organoid models, advanced imaging, lipidomics, and metabolic profiling to define lipid-energy coupling in neurons and identify therapeutic strategies for neurodegenerative and genetic neurological disorders.
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Protein Lipidation in Neuronal Function and Disease
Neuronal protein lipidation and membrane targeting mechanisms in brain function and disease. My research examines how protein lipidation regulates neuronal membrane association, trafficking, and homestasis. I study co- and post-translational lipid modifications such as N-myristoylation and S-palmitoylation pathways, and their roles in membrane trafficking, synaptic function and neurodegeneration. Using human iPSC and organoid models, advanced imaging and quantitative analysis, my work defines how dysregulated protein lipidation contributes to neurological diseases and reveals new opportunities for therapeutic intervention.
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Virus–host interactions and host-directed antiviral strategies in neurological and respiratory infections
My research investigates how viruses hijack host lipid metabolism and membrane trafficking pathways to enable replication and spread. I focus on defining host lipidation and metabolic pathways required for viral infection, particularly in respiratory and neuronal systems. Using human iPSC and organoid models, advanced imaging, multi-omics, and functional assays, my work aims to identify host-directed antiviral targets that reduce viral replication and limit infection-associated tissue damage.
Research impacts
A major focus of my laboratory is understanding how lipid metabolism supports neuronal energy production and brain function. Our research has challenged the long-standing view that neurons depend predominantly on glucose for energy by demonstrating that neurons can mobilise and use fatty acids to generate energy. We are now translating these discoveries towards new metabolic treatment strategies for rare inherited neurological disorders, including hereditary spastic paraplegias.
My team also uses patient-derived induced pluripotent stem cells (iPSCs) and human organoid models to recreate features of rare neurological diseases in the laboratory. These models provide a human-relevant platform for identifying disease mechanisms and evaluating potential treatments, including gene and metabolic therapies, while contributing to efforts to reduce reliance on animal models in preclinical research.
Our research into how viruses and bacterial neurotoxins exploit cellular pathways has also identified potential new therapeutic targets. This includes developing host-directed antiviral strategies that target cellular lipid-modifying enzymes rather than individual viruses, providing a potential route towards broad-spectrum antiviral therapies.
By combining advanced imaging, human stem cell and organoid technologies, disease modelling and therapeutic development, my laboratory seeks to convert fundamental discoveries about how human cells function into new opportunities to diagnose, prevent and treat neurological and infectious diseases.
Works
Search Professor Merja Joensuu’s works on UQ eSpace
2023
Other Outputs
Data for NASTIC
Wallis, Tristan P., Jiang, Anmin, Young, Kyle, Hou, Huioyi, Kudo, Kye, McCann, Alex, Durisic, Nela, Joensuu, Merja, Oelz, Dietmar, Nguyen, Hien, Gormal, Rachel S. and Meunier, Frederic A. (2023). Data for NASTIC. The University of Queensland. (Dataset) doi: 10.48610/0901bca
2023
Journal Article
SARS-CoV-2 infection of human neurons is TMPRSS2 independent, requires endosomal cell entry, and can be blocked by inhibitors of host phosphoinositol-5 kinase
Kettunen, Pinja, Lesnikova, Angelina, Räsänen, Noora, Ojha, Ravi, Palmunen, Leena, Laakso, Markku, Lehtonen, Šárka, Kuusisto, Johanna, Pietiläinen, Olli, Saber, Saber H., Joensuu, Merja, Vapalahti, Olli P., Koistinaho, Jari, Rolova, Taisia and Balistreri, Giuseppe (2023). SARS-CoV-2 infection of human neurons is TMPRSS2 independent, requires endosomal cell entry, and can be blocked by inhibitors of host phosphoinositol-5 kinase. Journal of Virology, 97 (4), e0014423. doi: 10.1128/jvi.00144-23
2023
Other Outputs
Longield et al_2023_NatComm_Raw
Gormal, Rachel, Meunier, Frederic, Martinez-Marmol, Ramon, Mollazade, Mahdie, Wallis, Tristan, Joensuu, Merja, Sanders, Shanley and Small, Christopher (2023). Longield et al_2023_NatComm_Raw. The University of Queensland. (Dataset) doi: 10.48610/a9c9def
2023
Other Outputs
BoNT/A binding and endocytosis in primary neurons
Joensuu, Merja and Meunier, Frederic (2023). BoNT/A binding and endocytosis in primary neurons. The University of Queensland. (Dataset) doi: 10.48610/06039ff
2022
Journal Article
Ancestral SARS-CoV-2, but not Omicron, replicates less efficiently in primary pediatric nasal epithelial cells
Zhu, Yanshan, Chew, Keng Yih, Wu, Melanie, Karawita, Anjana C., McCallum, Georgina, Steele, Lauren E., Yamamoto, Ayaho, Labzin, Larisa I., Yarlagadda, Tejasri, Khromykh, Alexander A., Wang, Xiaohui, Sng, Julian D. J., Stocks, Claudia J., Xia, Yao, Kollmann, Tobias R., Martino, David, Joensuu, Merja, Meunier, Frédéric A., Balistreri, Giuseppe, Bielefeldt-Ohmann, Helle, Bowen, Asha C., Kicic, Anthony, Sly, Peter D., Spann, Kirsten M. and Short, Kirsty R. (2022). Ancestral SARS-CoV-2, but not Omicron, replicates less efficiently in primary pediatric nasal epithelial cells. PLoS Biology, 20 (8) e3001728, 1-19. doi: 10.1371/journal.pbio.3001728
2021
Book Chapter
Combining single molecule super-resolution imaging techniques to unravel the nanoscale organization of the presynapse
Small, Christopher, Martínez-Mármol, Ramon, Amor, Rumelo, Meunier, Frederic A. and Joensuu, Merja (2021). Combining single molecule super-resolution imaging techniques to unravel the nanoscale organization of the presynapse. Exocytosis and endocytosis: methods and protocols. (pp. 265-286) edited by Florence Niedergang, Nicolas Vitale and Stéphane Gasman. New York, NY, United States: Humana Press. doi: 10.1007/978-1-0716-1044-2_18
2020
Journal Article
Modular transient nanoclustering of activated β2-adrenergic receptors revealed by single-molecule tracking of conformation-specific nanobodies
Gormal, Rachel S., Padmanabhan, Pranesh, Kasula, Ravikiran, Bademosi, Adekunle T., Coakley, Sean, Giacomotto, Jean, Blum, Ailisa, Joensuu, Merja, Wallis, Tristan P., Lo, Harriet P., Budnar, Srikanth, Rae, James, Ferguson, Charles, Bastiani, Michele, Thomas, Walter G., Pardon, Els, Steyaert, Jan, Yap, Alpha S., Goodhill, Geoffrey J., Hilliard, Massimo A., Parton, Robert G. and Meunier, Frédéric A. (2020). Modular transient nanoclustering of activated β2-adrenergic receptors revealed by single-molecule tracking of conformation-specific nanobodies. Proceedings of the National Academy of Sciences of the United States of America, 117 (48), 30476-30487. doi: 10.1073/pnas.2007443117
2020
Journal Article
Radial contractility of actomyosin rings facilitates axonal trafficking and structural stability
Wang, Tong, Li, Wei, Martin, Sally, Papadopulos, Andreas, Joensuu, Merja, Liu, Chunxia, Jiang, Anmin, Shamsollahi, Golnoosh, Amor, Rumelo, Lanoue, Vanessa, Padmanabhan, Pranesh and Meunier, Frédéric A. (2020). Radial contractility of actomyosin rings facilitates axonal trafficking and structural stability. Journal of Cell Biology, 219 (5) e201902001, 1-S7. doi: 10.1083/jcb.201902001
2020
Book Chapter
Single-molecule imaging of recycling synaptic vesicles in live neurons
Joensuu, Merja, Martínez-Mármol, Ramon, Mollazade, Mahdie, Padmanabhan, Pranesh and Meunier, Frédéric A. (2020). Single-molecule imaging of recycling synaptic vesicles in live neurons. Single molecule microscopy in neurobiology. (pp. 81-114) edited by Nobuhiko Yamamoto and Yasushi Okada. New York, NY United States: Humana Press. doi: 10.1007/978-1-0716-0532-5_5
2019
Journal Article
Phospholipases in neuronal function: a role in learning and memory?
Joensuu, Merja, Wallis, Tristan P., Saber, Saber H. and Meunier, Frédéric A. (2019). Phospholipases in neuronal function: a role in learning and memory?. Journal of Neurochemistry, 153 (3) jnc.14918, e14918-333. doi: 10.1111/jnc.14918
2019
Journal Article
GORAB scaffolds COPI at the trans-Golgi for efficient enzyme recycling and correct protein glycosylation
Witkos, Tomasz M., Chan, Wing Lee, Joensuu, Merja, Rhiel, Manuel, Pallister, Ed, Thomas-Oates, Jane, Mould, A. Paul, Mironov, Alex A., Biot, Christophe, Guerardel, Yann, Morelle, Willy, Ungar, Daniel, Wieland, Felix T., Jokitalo, Eija, Tassabehji, May, Kornak, Uwe and Lowe, Martin (2019). GORAB scaffolds COPI at the trans-Golgi for efficient enzyme recycling and correct protein glycosylation. Nature Communications, 10 (1) 127, 127. doi: 10.1038/s41467-018-08044-6
2019
Journal Article
VAMP2 Binding to Munc18-1 Domain 3a Controls the Nanoscale Reorganization of the Plasma Membrane and Vesicle Interface During Vesicular Priming
Kasula, Ravikiran, Blum, Ailisa, Salla-Martret, Merce, Chai, Ye Jin, Jiang, Anmin, Wallis, Tristan P., Gormal, Rachel S., Brouillet, Julie Z., Padmanabhan, Pranesh, Weeratunga, Saroja K., Livingstone, Emma K., Mollazade, Mahdie, Joensuu, Merja, Martínez-Mármol, Ramón, Collins, Brett M. and Meunier, Frederic (2019). VAMP2 Binding to Munc18-1 Domain 3a Controls the Nanoscale Reorganization of the Plasma Membrane and Vesicle Interface During Vesicular Priming. SSRN Electronic Journal. doi: 10.2139/ssrn.3362260
2018
Journal Article
Dendritic spine actin cytoskeleton in autism spectrum disorder
Joensuu, Merja, Lanoue, Vanessa and Hotulainen, Pirta (2018). Dendritic spine actin cytoskeleton in autism spectrum disorder. Progress in Neuro-Psychopharmacology and Biological Psychiatry, 84 (Pt B), 362-381. doi: 10.1016/j.pnpbp.2017.08.023
2018
Conference Publication
Super-resolving botulinum neurotoxin type A molecules: from surface landing to internalization in synaptic vesicles
Joensuu, Merja, Blum, Ailisa, Mollazade, Mahdie, Lanoue, Vanessa, Padmanabhan, Pranesh, Small, Christopher, Mahrhold, Stefan, Krez, Nadja, Rummel, Andreas and Meunier, Frederic A. (2018). Super-resolving botulinum neurotoxin type A molecules: from surface landing to internalization in synaptic vesicles. TOXINS 2019: Basic Science and Clinical Aspects of Botulinum and Other Neurotoxins, Copenhagen, Denmark, 16-19 January 2019. Kidlington, Oxford, United Kingdom: Pergamon Press. doi: 10.1016/j.toxicon.2018.11.122
2017
Conference Publication
Nanoscale imaging of botulinum neurotoxin type a retrograde axonal trafficking
Harper, Callista B., Wang, Tong, Joensuu, Merja, Papadopulos, Andreas and Meunier, Frederic A. (2017). Nanoscale imaging of botulinum neurotoxin type a retrograde axonal trafficking. TOXINS: Basic Science and Clinical Aspects of Botulinum and other Neurotoxins, Madrid, Spain, 18-21 January 2017. Oxford, United Kingdom: Pergamon Press. doi: 10.1016/j.toxicon.2016.11.106
2016
Journal Article
NOGO-A/RTN4A and NOGO-B/RTN4B are simultaneously expressed in epithelial, fibroblast and neuronal cells and maintain ER morphology
Ramo, Olli, Kumar, Darshan, Gucciardo, Erika, Joensuu, Merja, Saarekas, Maiju, Vihinen, Helena, Belevich, Ilya, Smolander, Olli-Pekka, Qian, Kui, Auvinen, Petri and Jokitalo, Eija (2016). NOGO-A/RTN4A and NOGO-B/RTN4B are simultaneously expressed in epithelial, fibroblast and neuronal cells and maintain ER morphology. Scientific Reports, 6 (1) 35969. doi: 10.1038/srep35969
2016
Journal Article
Microscopy image browser: a platform for segmentation and analysis of multidimensional datasets
Belevich, Ilya, Joensuu, Merja, Kumar, Darshan, Vihinen, Helena and Jokitalo, Eija (2016). Microscopy image browser: a platform for segmentation and analysis of multidimensional datasets. PLoS Biology, 14 (1) e1002340, e1002340. doi: 10.1371/journal.pbio.1002340
2015
Journal Article
ER sheet-tubule balance is regulated by an array of actin filaments and microtubules
Joensuu, Merja and Jokitalo, Eija (2015). ER sheet-tubule balance is regulated by an array of actin filaments and microtubules. Experimental Cell Research, 337 (2), 170-178. doi: 10.1016/j.yexcr.2015.04.009
2015
Journal Article
Genome-wide RNAi screen for nuclear actin reveals a network of cofilin regulators
Dopie, Joseph, Rajakyla, Eeva K., Joensuu, Merja S., Huet, Guillaume, Ferrantelli, Evelina, Xie, Tiao, Jaalinoja, Harri, Jokitalo, Eija and Vartiainen, Maria K. (2015). Genome-wide RNAi screen for nuclear actin reveals a network of cofilin regulators. Journal of Cell Science, 128 (13), 2388-2400. doi: 10.1242/jcs.169441
2014
Journal Article
ER sheet persistence is coupled to myosin 1c-regulated dynamic actin filament arrays
Joensuu, Merja, Belevich, Ilya, Ramo, Olli, Nevzorov, Ilya, Vihinen, Helena, Puhka, Maija, Witkos, Tomasz M., Lowe, Martin, Vartiainen, Maria K. and Jokitalo, Eija (2014). ER sheet persistence is coupled to myosin 1c-regulated dynamic actin filament arrays. Molecular Biology of the Cell, 25 (7), 1111-1126. doi: 10.1091/mbc.E13-12-0712
Funding
Current funding
Past funding
Supervision
Availability
- Dr Merja Joensuu is:
- Available for supervision
Looking for a supervisor? Read our advice on how to choose a supervisor.
Supervision history
Current supervision
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Doctor Philosophy
Lipid metabolism regulates neuronal energy homeostasis, protein N-myristoylation and membrane trafficking
Principal Advisor
Other advisors: Dr Hannah Leeson
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Doctor Philosophy
Mechanisms of RGD-Functionalized Nanomaterials in Tumor Cell Biology
Associate Advisor
Other advisors: Dr Wenyi Gu, Professor Michael Monteiro
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Doctor Philosophy
Identifying the mechanism of regeneration in early brain development
Associate Advisor
Other advisors: Dr Selin Pars, Dr Giovanni Pietrogrande
Completed supervision
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2024
Doctor Philosophy
Bidirectional modulation of cellular saturated fatty acids as potential therapeutics for neurological conditions and viral infections
Principal Advisor
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2022
Doctor Philosophy
Identifying Key Changes in Brain Free Fatty Acids Associated with Memory in Health, Ageing and Disease: A Mechanistic Study
Associate Advisor
Other advisors: Dr Tristan Wallis, Professor Frederic Meunier
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2022
Doctor Philosophy
Characterization and role of lateral trapping and nanocluster organization of the endocytic machinery
Associate Advisor
Other advisors: Professor Frederic Meunier
Media
Enquiries
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- Neuronal energy metabolism
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