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Dr Merja Joensuu
Dr

Merja Joensuu

Email: 
Phone: 
+61 7 334 64598

Overview

Background

I am an ARC Future Fellow and Group Leader at the Australian Institute for Bioengineering and Nanotechnology (AIBN), The University of Queensland (UQ). I received my PhD (with distinction) from the University of Helsinki, Finland, in 2014 and joined UQ in 2015. My research has been supported by prestigious fellowships, including an Academy of Finland Postdoctoral Fellowship, ARC DECRA, UQ Amplify Fellowship and ARC Future Fellowship (2026).

My laboratory investigates the cellular mechanisms that sustain brain function and contribute to neurological disease. Our research challenges longstanding assumptions about brain energy metabolism by demonstrating that neurons use fatty acids to generate energy, revealing a previously underappreciated pathway supporting synaptic function and cognition. These discoveries open new avenues for understanding and potentially treating neurological disorders associated with impaired lipid metabolism and mitochondrial dysfunction.

Combining advanced imaging, molecular and cell biology, human induced pluripotent stem cell (iPSC) and organoid models, we investigate how genetic and environmental disturbances disrupt neuronal function. Our research spans inherited neurological and neurodevelopmental disorders, and viral infections.

Our goal is to translate fundamental discoveries into therapeutic strategies that restore neuronal function and improve outcomes for people living with neurological disease.

Availability

Dr Merja Joensuu is:
Available for supervision
Media expert

Qualifications

  • Doctor of Philosophy, University of Helsinki*

Research interests

  • Neuronal Fatty Acid Energy Metabolism

    My research investigates how fatty acid metabolism and lipid-derived energy pathways support neuronal function and brain health. My laboratory discovered that DDHD2 regulates the release of endogenous saturated fatty acids that neurons can use to generate mitochondrial ATP energy, challenging the longstanding view that neuronal energy metabolism relies exclusively on glucose under normal physiological conditions. Importantly, we demonstrated that disruption of this pathway compromises neuronal energy production and synaptic function, while replenishing the missing fatty acids can restore these processes. These findings reveal a previously uncharacterized mechanism of neuronal energy regulation and identify a potential therapeutic target for neurological disorders associated with impaired lipid metabolism. Building on this discovery, my ARC Future Fellowship investigates how neuronal fatty acid metabolism supports brain energy homeostasis and metabolic resilience during ageing and disease. By integrating advanced imaging, lipidomics, metabolic profiling, and human iPSC and organoid models, we aim to translate these discoveries into new metabolic therapies for inherited and neurodegenerative disorders.

  • Protein Lipidation in Neuronal Function, and in Genetic and Infectious Diseases

    My research investigates how protein lipidation regulates neuronal membrane targeting, intracellular trafficking, synaptic function and cellular homeostasis. We focus on lipid modifications, particularly N-myristoylation and S-palmitoylation, which control protein association with cellular membranes, subcellular localisation and signalling. A key focus is the role of DDHD2 in regulating the availability of endogenous saturated fatty acids, including myristate and palmitate, which serve as essential substrates for protein lipidation. We investigate how DDHD2-dependent fatty acid metabolism may link neuronal energy production with protein lipidation, and how disruption of these interconnected pathways contributes to synaptic dysfunction and neurological disease. By combining advanced imaging, quantitative cell biology, and human iPSC and organoid models, we aim to uncover fundamental mechanisms of neuronal lipid regulation and identify new opportunities for therapeutic intervention.

  • Virus–host interactions, neuronal metabolic resilience, and host-directed antiviral strategies in neurological and respiratory infections

    My laboratory investigates how viruses exploit host cellular pathways to establish infection and how viral infections may compromise neuronal metabolic resilience, particularly in individuals with underlying metabolic vulnerabilities. We aim to understand how infection-induced cellular stress interacts with neuronal energy metabolism and contributes to neurodegeneration. In parallel, we develop host-directed antiviral strategies targeting cellular lipid-modifying enzymes, including protein lipidation pathways, with the potential to provide broad-spectrum protection against neurological and respiratory viral infections. By integrating virus–host biology, neuronal metabolism and human stem cell-derived models, we seek to identify therapeutic approaches that both limit viral infection and preserve neuronal function and resilience.

Research impacts

My research aims to transform our understanding of neurological disease and translate fundamental discoveries into new therapeutic opportunities.

A major breakthrough from my laboratory has challenged the longstanding view of how the brain is powered. We demonstrated that neurons can mobilise endogenous fatty acids to generate mitochondrial ATP energy, revealing a previously unknown energy pathway that supports synaptic function. This discovery opens new avenues for understanding neurological disorders associated with impaired lipid metabolism and mitochondrial dysfunction. We are now investigating how these findings can be translated into metabolic therapies for rare inherited neurological disorders, including hereditary spastic paraplegias, where emerging evidence suggests that disturbances in neuronal fatty acid metabolism and bioenergetics may represent a convergent disease mechanism across several subtypes.

My team also develops human induced pluripotent stem cell (iPSC) and organoid models to uncover disease mechanisms that are difficult to investigate using conventional experimental systems. These human-relevant platforms enable us to evaluate emerging therapeutic approaches, including gene and metabolic therapies, while advancing alternatives to animal-based preclinical research.

Beyond neurological disease, our research has identified cellular mechanisms exploited by viruses, opening new avenues for host-directed antiviral therapies targeting protein lipidation, with potential broad-spectrum activity against multiple viral pathogens. We are also investigating how viral infections may compromise neuronal metabolic resilience and accelerate neurodegeneration in vulnerable individuals, aiming to identify therapeutic strategies that strengthen neuronal resilience to infection-induced stress and prevent disease progression.

By bridging fundamental cell biology, advanced imaging, human disease modelling and therapeutic development, our research seeks to convert discoveries at the molecular level into meaningful advances in human health.

Works

Search Professor Merja Joensuu’s works on UQ eSpace

43 works between 2007 and 2027

21 - 40 of 43 works

2023

Journal Article

Super-resolved trajectory-derived nanoclustering analysis using spatiotemporal indexing

Wallis, Tristan P., Jiang, Anmin, Young, Kyle, Hou, Huiyi, Kudo, Kye, McCann, Alex J., Durisic, Nela, Joensuu, Merja, Oelz, Dietmar, Nguyen, Hien, Gormal, Rachel S. and Meunier, Frédéric A. (2023). Super-resolved trajectory-derived nanoclustering analysis using spatiotemporal indexing. Nature Communications, 14 (1) 3353, 1-16. doi: 10.1038/s41467-023-38866-y

Super-resolved trajectory-derived nanoclustering analysis using spatiotemporal indexing

2023

Other Outputs

Data for NASTIC

Wallis, Tristan P., Jiang, Anmin, Young, Kyle, Hou, Huioyi, Kudo, Kye, McCann, Alex, Durisic, Nela, Joensuu, Merja, Oelz, Dietmar, Nguyen, Hien, Gormal, Rachel S. and Meunier, Frederic A. (2023). Data for NASTIC. The University of Queensland. (Dataset) doi: 10.48610/0901bca

Data for NASTIC

2023

Journal Article

SARS-CoV-2 infection of human neurons is TMPRSS2 independent, requires endosomal cell entry, and can be blocked by inhibitors of host phosphoinositol-5 kinase

Kettunen, Pinja, Lesnikova, Angelina, Räsänen, Noora, Ojha, Ravi, Palmunen, Leena, Laakso, Markku, Lehtonen, Šárka, Kuusisto, Johanna, Pietiläinen, Olli, Saber, Saber H., Joensuu, Merja, Vapalahti, Olli P., Koistinaho, Jari, Rolova, Taisia and Balistreri, Giuseppe (2023). SARS-CoV-2 infection of human neurons is TMPRSS2 independent, requires endosomal cell entry, and can be blocked by inhibitors of host phosphoinositol-5 kinase. Journal of Virology, 97 (4), e0014423. doi: 10.1128/jvi.00144-23

SARS-CoV-2 infection of human neurons is TMPRSS2 independent, requires endosomal cell entry, and can be blocked by inhibitors of host phosphoinositol-5 kinase

2023

Other Outputs

BoNT/A binding and endocytosis in primary neurons

Joensuu, Merja and Meunier, Frederic (2023). BoNT/A binding and endocytosis in primary neurons. The University of Queensland. (Dataset) doi: 10.48610/06039ff

BoNT/A binding and endocytosis in primary neurons

2023

Other Outputs

Longield et al_2023_NatComm_Raw

Gormal, Rachel, Meunier, Frederic, Martinez-Marmol, Ramon, Mollazade, Mahdie, Wallis, Tristan, Joensuu, Merja, Sanders, Shanley and Small, Christopher (2023). Longield et al_2023_NatComm_Raw. The University of Queensland. (Dataset) doi: 10.48610/a9c9def

Longield et al_2023_NatComm_Raw

2022

Journal Article

Ancestral SARS-CoV-2, but not Omicron, replicates less efficiently in primary pediatric nasal epithelial cells

Zhu, Yanshan, Chew, Keng Yih, Wu, Melanie, Karawita, Anjana C., McCallum, Georgina, Steele, Lauren E., Yamamoto, Ayaho, Labzin, Larisa I., Yarlagadda, Tejasri, Khromykh, Alexander A., Wang, Xiaohui, Sng, Julian D. J., Stocks, Claudia J., Xia, Yao, Kollmann, Tobias R., Martino, David, Joensuu, Merja, Meunier, Frédéric A., Balistreri, Giuseppe, Bielefeldt-Ohmann, Helle, Bowen, Asha C., Kicic, Anthony, Sly, Peter D., Spann, Kirsten M. and Short, Kirsty R. (2022). Ancestral SARS-CoV-2, but not Omicron, replicates less efficiently in primary pediatric nasal epithelial cells. PLoS Biology, 20 (8) e3001728, 1-19. doi: 10.1371/journal.pbio.3001728

Ancestral SARS-CoV-2, but not Omicron, replicates less efficiently in primary pediatric nasal epithelial cells

2021

Book Chapter

Combining single molecule super-resolution imaging techniques to unravel the nanoscale organization of the presynapse

Small, Christopher, Martínez-Mármol, Ramon, Amor, Rumelo, Meunier, Frederic A. and Joensuu, Merja (2021). Combining single molecule super-resolution imaging techniques to unravel the nanoscale organization of the presynapse. Exocytosis and endocytosis: methods and protocols. (pp. 265-286) edited by Florence Niedergang, Nicolas Vitale and Stéphane Gasman. New York, NY, United States: Humana Press. doi: 10.1007/978-1-0716-1044-2_18

Combining single molecule super-resolution imaging techniques to unravel the nanoscale organization of the presynapse

2020

Journal Article

Modular transient nanoclustering of activated β2-adrenergic receptors revealed by single-molecule tracking of conformation-specific nanobodies

Gormal, Rachel S., Padmanabhan, Pranesh, Kasula, Ravikiran, Bademosi, Adekunle T., Coakley, Sean, Giacomotto, Jean, Blum, Ailisa, Joensuu, Merja, Wallis, Tristan P., Lo, Harriet P., Budnar, Srikanth, Rae, James, Ferguson, Charles, Bastiani, Michele, Thomas, Walter G., Pardon, Els, Steyaert, Jan, Yap, Alpha S., Goodhill, Geoffrey J., Hilliard, Massimo A., Parton, Robert G. and Meunier, Frédéric A. (2020). Modular transient nanoclustering of activated β2-adrenergic receptors revealed by single-molecule tracking of conformation-specific nanobodies. Proceedings of the National Academy of Sciences of the United States of America, 117 (48), 30476-30487. doi: 10.1073/pnas.2007443117

Modular transient nanoclustering of activated β2-adrenergic receptors revealed by single-molecule tracking of conformation-specific nanobodies

2020

Journal Article

Radial contractility of actomyosin rings facilitates axonal trafficking and structural stability

Wang, Tong, Li, Wei, Martin, Sally, Papadopulos, Andreas, Joensuu, Merja, Liu, Chunxia, Jiang, Anmin, Shamsollahi, Golnoosh, Amor, Rumelo, Lanoue, Vanessa, Padmanabhan, Pranesh and Meunier, Frédéric A. (2020). Radial contractility of actomyosin rings facilitates axonal trafficking and structural stability. Journal of Cell Biology, 219 (5) e201902001, 1-S7. doi: 10.1083/jcb.201902001

Radial contractility of actomyosin rings facilitates axonal trafficking and structural stability

2020

Book Chapter

Single-molecule imaging of recycling synaptic vesicles in live neurons

Joensuu, Merja, Martínez-Mármol, Ramon, Mollazade, Mahdie, Padmanabhan, Pranesh and Meunier, Frédéric A. (2020). Single-molecule imaging of recycling synaptic vesicles in live neurons. Single molecule microscopy in neurobiology. (pp. 81-114) edited by Nobuhiko Yamamoto and Yasushi Okada. New York, NY United States: Humana Press. doi: 10.1007/978-1-0716-0532-5_5

Single-molecule imaging of recycling synaptic vesicles in live neurons

2019

Journal Article

Phospholipases in neuronal function: a role in learning and memory?

Joensuu, Merja, Wallis, Tristan P., Saber, Saber H. and Meunier, Frédéric A. (2019). Phospholipases in neuronal function: a role in learning and memory?. Journal of Neurochemistry, 153 (3) jnc.14918, e14918-333. doi: 10.1111/jnc.14918

Phospholipases in neuronal function: a role in learning and memory?

2019

Journal Article

GORAB scaffolds COPI at the trans-Golgi for efficient enzyme recycling and correct protein glycosylation

Witkos, Tomasz M., Chan, Wing Lee, Joensuu, Merja, Rhiel, Manuel, Pallister, Ed, Thomas-Oates, Jane, Mould, A. Paul, Mironov, Alex A., Biot, Christophe, Guerardel, Yann, Morelle, Willy, Ungar, Daniel, Wieland, Felix T., Jokitalo, Eija, Tassabehji, May, Kornak, Uwe and Lowe, Martin (2019). GORAB scaffolds COPI at the trans-Golgi for efficient enzyme recycling and correct protein glycosylation. Nature Communications, 10 (1) 127, 127. doi: 10.1038/s41467-018-08044-6

GORAB scaffolds COPI at the trans-Golgi for efficient enzyme recycling and correct protein glycosylation

2019

Journal Article

VAMP2 Binding to Munc18-1 Domain 3a Controls the Nanoscale Reorganization of the Plasma Membrane and Vesicle Interface During Vesicular Priming

Kasula, Ravikiran, Blum, Ailisa, Salla-Martret, Merce, Chai, Ye Jin, Jiang, Anmin, Wallis, Tristan P., Gormal, Rachel S., Brouillet, Julie Z., Padmanabhan, Pranesh, Weeratunga, Saroja K., Livingstone, Emma K., Mollazade, Mahdie, Joensuu, Merja, Martínez-Mármol, Ramón, Collins, Brett M. and Meunier, Frederic (2019). VAMP2 Binding to Munc18-1 Domain 3a Controls the Nanoscale Reorganization of the Plasma Membrane and Vesicle Interface During Vesicular Priming. SSRN Electronic Journal. doi: 10.2139/ssrn.3362260

VAMP2 Binding to Munc18-1 Domain 3a Controls the Nanoscale Reorganization of the Plasma Membrane and Vesicle Interface During Vesicular Priming

2018

Journal Article

Dendritic spine actin cytoskeleton in autism spectrum disorder

Joensuu, Merja, Lanoue, Vanessa and Hotulainen, Pirta (2018). Dendritic spine actin cytoskeleton in autism spectrum disorder. Progress in Neuro-Psychopharmacology and Biological Psychiatry, 84 (Pt B), 362-381. doi: 10.1016/j.pnpbp.2017.08.023

Dendritic spine actin cytoskeleton in autism spectrum disorder

2018

Conference Publication

Super-resolving botulinum neurotoxin type A molecules: from surface landing to internalization in synaptic vesicles

Joensuu, Merja, Blum, Ailisa, Mollazade, Mahdie, Lanoue, Vanessa, Padmanabhan, Pranesh, Small, Christopher, Mahrhold, Stefan, Krez, Nadja, Rummel, Andreas and Meunier, Frederic A. (2018). Super-resolving botulinum neurotoxin type A molecules: from surface landing to internalization in synaptic vesicles. TOXINS 2019: Basic Science and Clinical Aspects of Botulinum and Other Neurotoxins, Copenhagen, Denmark, 16-19 January 2019. Kidlington, Oxford, United Kingdom: Pergamon Press. doi: 10.1016/j.toxicon.2018.11.122

Super-resolving botulinum neurotoxin type A molecules: from surface landing to internalization in synaptic vesicles

2017

Conference Publication

Nanoscale imaging of botulinum neurotoxin type a retrograde axonal trafficking

Harper, Callista B., Wang, Tong, Joensuu, Merja, Papadopulos, Andreas and Meunier, Frederic A. (2017). Nanoscale imaging of botulinum neurotoxin type a retrograde axonal trafficking. TOXINS: Basic Science and Clinical Aspects of Botulinum and other Neurotoxins, Madrid, Spain, 18-21 January 2017. Oxford, United Kingdom: Pergamon Press. doi: 10.1016/j.toxicon.2016.11.106

Nanoscale imaging of botulinum neurotoxin type a retrograde axonal trafficking

2016

Journal Article

NOGO-A/RTN4A and NOGO-B/RTN4B are simultaneously expressed in epithelial, fibroblast and neuronal cells and maintain ER morphology

Ramo, Olli, Kumar, Darshan, Gucciardo, Erika, Joensuu, Merja, Saarekas, Maiju, Vihinen, Helena, Belevich, Ilya, Smolander, Olli-Pekka, Qian, Kui, Auvinen, Petri and Jokitalo, Eija (2016). NOGO-A/RTN4A and NOGO-B/RTN4B are simultaneously expressed in epithelial, fibroblast and neuronal cells and maintain ER morphology. Scientific Reports, 6 (1) 35969. doi: 10.1038/srep35969

NOGO-A/RTN4A and NOGO-B/RTN4B are simultaneously expressed in epithelial, fibroblast and neuronal cells and maintain ER morphology

2016

Journal Article

Microscopy image browser: a platform for segmentation and analysis of multidimensional datasets

Belevich, Ilya, Joensuu, Merja, Kumar, Darshan, Vihinen, Helena and Jokitalo, Eija (2016). Microscopy image browser: a platform for segmentation and analysis of multidimensional datasets. PLoS Biology, 14 (1) e1002340, e1002340. doi: 10.1371/journal.pbio.1002340

Microscopy image browser: a platform for segmentation and analysis of multidimensional datasets

2015

Journal Article

ER sheet-tubule balance is regulated by an array of actin filaments and microtubules

Joensuu, Merja and Jokitalo, Eija (2015). ER sheet-tubule balance is regulated by an array of actin filaments and microtubules. Experimental Cell Research, 337 (2), 170-178. doi: 10.1016/j.yexcr.2015.04.009

ER sheet-tubule balance is regulated by an array of actin filaments and microtubules

2015

Journal Article

Genome-wide RNAi screen for nuclear actin reveals a network of cofilin regulators

Dopie, Joseph, Rajakyla, Eeva K., Joensuu, Merja S., Huet, Guillaume, Ferrantelli, Evelina, Xie, Tiao, Jaalinoja, Harri, Jokitalo, Eija and Vartiainen, Maria K. (2015). Genome-wide RNAi screen for nuclear actin reveals a network of cofilin regulators. Journal of Cell Science, 128 (13), 2388-2400. doi: 10.1242/jcs.169441

Genome-wide RNAi screen for nuclear actin reveals a network of cofilin regulators

Funding

Current funding

  • 2027 - 2030
    Fuelling the Brain: Neuronal Fatty Acid Metabolism in Energy and Cognition
    ARC Future Fellowships
    Open grant
  • 2026 - 2027
    Investigation of how disruption of lipid metabolism contributes to neurodevelopmental disorders
    NSCFA/ASSCR Near Miss Funding Program
    Open grant
  • 2025 - 2029
    Super-resolution Imaging Study on Host-targeted Interventions Against Orthoflavivirus Neuroinvasion (REFINE)
    NHMRC European Union Collaborative Research Grants
    Open grant
  • 2025 - 2028
    Receptor-Focused Interventions Against Orthoflavivirus Neuroinvasion and Entry (EU component of an International Joint Call NHMRC-EU administered by Erasmus MC)
    Erasmus University Medical Center Rotterdam
    Open grant
  • 2021 - 2030
    Hereditary Spastic Paraplegia Research Model
    The Trustee for Moon Atlas Trust
    Open grant

Past funding

  • 2020 - 2023
    Dendritic spine actin dysfunction in autism spectrum disorder leads to altered neurotransmitter receptor mobility
    RL Cooper Medical Research Foundation Limited
    Open grant
  • 2020
    Dynamic and molecular determinants of nanoscale organization of different synaptic vesicle pools
    UQ Early Career Researcher
    Open grant
  • 2019 - 2022
    A novel role for saturated fatty acids in learning and memory
    ARC Discovery Early Career Researcher Award
    Open grant
  • 2018
    To attend the joint meeting of The American Society for Cell Biology/ The European Molecular Biology Organization (ASCB/ EMBO) in San Diego CA, US, 8-12 December 2018
    Ian Potter Foundation
    Open grant

Supervision

Availability

Dr Merja Joensuu is:
Available for supervision

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Supervision history

Current supervision

Completed supervision

Media

Enquiries

Contact Dr Merja Joensuu directly for media enquiries about:

  • Neuronal energy metabolism

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