Overview
Background
I am an ARC Future Fellow and Group Leader at the Australian Institute for Bioengineering and Nanotechnology (AIBN), The University of Queensland (UQ). I received my PhD (with distinction) from the University of Helsinki, Finland, in 2014 and joined UQ in 2015. My research has been supported by prestigious fellowships, including an Academy of Finland Postdoctoral Fellowship, ARC DECRA, UQ Amplify Fellowship and ARC Future Fellowship (2026).
My laboratory investigates the cellular mechanisms that sustain brain function and contribute to neurological disease. Our research challenges longstanding assumptions about brain energy metabolism by demonstrating that neurons use fatty acids to generate energy, revealing a previously underappreciated pathway supporting synaptic function and cognition. These discoveries open new avenues for understanding and potentially treating neurological disorders associated with impaired lipid metabolism and mitochondrial dysfunction.
Combining advanced imaging, molecular and cell biology, human induced pluripotent stem cell (iPSC) and organoid models, we investigate how genetic and environmental disturbances disrupt neuronal function. Our research spans inherited neurological and neurodevelopmental disorders, and viral infections.
Our goal is to translate fundamental discoveries into therapeutic strategies that restore neuronal function and improve outcomes for people living with neurological disease.
Availability
- Dr Merja Joensuu is:
- Available for supervision
- Media expert
Fields of research
Qualifications
- Doctor of Philosophy, University of Helsinki*
Research interests
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Neuronal Fatty Acid Energy Metabolism
My research investigates how fatty acid metabolism and lipid-derived energy pathways support neuronal function and brain health. My laboratory discovered that DDHD2 regulates the release of endogenous saturated fatty acids that neurons can use to generate mitochondrial ATP energy, challenging the longstanding view that neuronal energy metabolism relies exclusively on glucose under normal physiological conditions. Importantly, we demonstrated that disruption of this pathway compromises neuronal energy production and synaptic function, while replenishing the missing fatty acids can restore these processes. These findings reveal a previously uncharacterized mechanism of neuronal energy regulation and identify a potential therapeutic target for neurological disorders associated with impaired lipid metabolism. Building on this discovery, my ARC Future Fellowship investigates how neuronal fatty acid metabolism supports brain energy homeostasis and metabolic resilience during ageing and disease. By integrating advanced imaging, lipidomics, metabolic profiling, and human iPSC and organoid models, we aim to translate these discoveries into new metabolic therapies for inherited and neurodegenerative disorders.
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Protein Lipidation in Neuronal Function, and in Genetic and Infectious Diseases
My research investigates how protein lipidation regulates neuronal membrane targeting, intracellular trafficking, synaptic function and cellular homeostasis. We focus on lipid modifications, particularly N-myristoylation and S-palmitoylation, which control protein association with cellular membranes, subcellular localisation and signalling. A key focus is the role of DDHD2 in regulating the availability of endogenous saturated fatty acids, including myristate and palmitate, which serve as essential substrates for protein lipidation. We investigate how DDHD2-dependent fatty acid metabolism may link neuronal energy production with protein lipidation, and how disruption of these interconnected pathways contributes to synaptic dysfunction and neurological disease. By combining advanced imaging, quantitative cell biology, and human iPSC and organoid models, we aim to uncover fundamental mechanisms of neuronal lipid regulation and identify new opportunities for therapeutic intervention.
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Virus–host interactions, neuronal metabolic resilience, and host-directed antiviral strategies in neurological and respiratory infections
My laboratory investigates how viruses exploit host cellular pathways to establish infection and how viral infections may compromise neuronal metabolic resilience, particularly in individuals with underlying metabolic vulnerabilities. We aim to understand how infection-induced cellular stress interacts with neuronal energy metabolism and contributes to neurodegeneration. In parallel, we develop host-directed antiviral strategies targeting cellular lipid-modifying enzymes, including protein lipidation pathways, with the potential to provide broad-spectrum protection against neurological and respiratory viral infections. By integrating virus–host biology, neuronal metabolism and human stem cell-derived models, we seek to identify therapeutic approaches that both limit viral infection and preserve neuronal function and resilience.
Research impacts
My research aims to transform our understanding of neurological disease and translate fundamental discoveries into new therapeutic opportunities.
A major breakthrough from my laboratory has challenged the longstanding view of how the brain is powered. We demonstrated that neurons can mobilise endogenous fatty acids to generate mitochondrial ATP energy, revealing a previously unknown energy pathway that supports synaptic function. This discovery opens new avenues for understanding neurological disorders associated with impaired lipid metabolism and mitochondrial dysfunction. We are now investigating how these findings can be translated into metabolic therapies for rare inherited neurological disorders, including hereditary spastic paraplegias, where emerging evidence suggests that disturbances in neuronal fatty acid metabolism and bioenergetics may represent a convergent disease mechanism across several subtypes.
My team also develops human induced pluripotent stem cell (iPSC) and organoid models to uncover disease mechanisms that are difficult to investigate using conventional experimental systems. These human-relevant platforms enable us to evaluate emerging therapeutic approaches, including gene and metabolic therapies, while advancing alternatives to animal-based preclinical research.
Beyond neurological disease, our research has identified cellular mechanisms exploited by viruses, opening new avenues for host-directed antiviral therapies targeting protein lipidation, with potential broad-spectrum activity against multiple viral pathogens. We are also investigating how viral infections may compromise neuronal metabolic resilience and accelerate neurodegeneration in vulnerable individuals, aiming to identify therapeutic strategies that strengthen neuronal resilience to infection-induced stress and prevent disease progression.
By bridging fundamental cell biology, advanced imaging, human disease modelling and therapeutic development, our research seeks to convert discoveries at the molecular level into meaningful advances in human health.
Works
Search Professor Merja Joensuu’s works on UQ eSpace
2023
Journal Article
Super-resolved trajectory-derived nanoclustering analysis using spatiotemporal indexing
Wallis, Tristan P., Jiang, Anmin, Young, Kyle, Hou, Huiyi, Kudo, Kye, McCann, Alex J., Durisic, Nela, Joensuu, Merja, Oelz, Dietmar, Nguyen, Hien, Gormal, Rachel S. and Meunier, Frédéric A. (2023). Super-resolved trajectory-derived nanoclustering analysis using spatiotemporal indexing. Nature Communications, 14 (1) 3353, 1-16. doi: 10.1038/s41467-023-38866-y
2023
Other Outputs
Data for NASTIC
Wallis, Tristan P., Jiang, Anmin, Young, Kyle, Hou, Huioyi, Kudo, Kye, McCann, Alex, Durisic, Nela, Joensuu, Merja, Oelz, Dietmar, Nguyen, Hien, Gormal, Rachel S. and Meunier, Frederic A. (2023). Data for NASTIC. The University of Queensland. (Dataset) doi: 10.48610/0901bca
2023
Journal Article
SARS-CoV-2 infection of human neurons is TMPRSS2 independent, requires endosomal cell entry, and can be blocked by inhibitors of host phosphoinositol-5 kinase
Kettunen, Pinja, Lesnikova, Angelina, Räsänen, Noora, Ojha, Ravi, Palmunen, Leena, Laakso, Markku, Lehtonen, Šárka, Kuusisto, Johanna, Pietiläinen, Olli, Saber, Saber H., Joensuu, Merja, Vapalahti, Olli P., Koistinaho, Jari, Rolova, Taisia and Balistreri, Giuseppe (2023). SARS-CoV-2 infection of human neurons is TMPRSS2 independent, requires endosomal cell entry, and can be blocked by inhibitors of host phosphoinositol-5 kinase. Journal of Virology, 97 (4), e0014423. doi: 10.1128/jvi.00144-23
2023
Other Outputs
BoNT/A binding and endocytosis in primary neurons
Joensuu, Merja and Meunier, Frederic (2023). BoNT/A binding and endocytosis in primary neurons. The University of Queensland. (Dataset) doi: 10.48610/06039ff
2023
Other Outputs
Longield et al_2023_NatComm_Raw
Gormal, Rachel, Meunier, Frederic, Martinez-Marmol, Ramon, Mollazade, Mahdie, Wallis, Tristan, Joensuu, Merja, Sanders, Shanley and Small, Christopher (2023). Longield et al_2023_NatComm_Raw. The University of Queensland. (Dataset) doi: 10.48610/a9c9def
2022
Journal Article
Ancestral SARS-CoV-2, but not Omicron, replicates less efficiently in primary pediatric nasal epithelial cells
Zhu, Yanshan, Chew, Keng Yih, Wu, Melanie, Karawita, Anjana C., McCallum, Georgina, Steele, Lauren E., Yamamoto, Ayaho, Labzin, Larisa I., Yarlagadda, Tejasri, Khromykh, Alexander A., Wang, Xiaohui, Sng, Julian D. J., Stocks, Claudia J., Xia, Yao, Kollmann, Tobias R., Martino, David, Joensuu, Merja, Meunier, Frédéric A., Balistreri, Giuseppe, Bielefeldt-Ohmann, Helle, Bowen, Asha C., Kicic, Anthony, Sly, Peter D., Spann, Kirsten M. and Short, Kirsty R. (2022). Ancestral SARS-CoV-2, but not Omicron, replicates less efficiently in primary pediatric nasal epithelial cells. PLoS Biology, 20 (8) e3001728, 1-19. doi: 10.1371/journal.pbio.3001728
2021
Book Chapter
Combining single molecule super-resolution imaging techniques to unravel the nanoscale organization of the presynapse
Small, Christopher, Martínez-Mármol, Ramon, Amor, Rumelo, Meunier, Frederic A. and Joensuu, Merja (2021). Combining single molecule super-resolution imaging techniques to unravel the nanoscale organization of the presynapse. Exocytosis and endocytosis: methods and protocols. (pp. 265-286) edited by Florence Niedergang, Nicolas Vitale and Stéphane Gasman. New York, NY, United States: Humana Press. doi: 10.1007/978-1-0716-1044-2_18
2020
Journal Article
Modular transient nanoclustering of activated β2-adrenergic receptors revealed by single-molecule tracking of conformation-specific nanobodies
Gormal, Rachel S., Padmanabhan, Pranesh, Kasula, Ravikiran, Bademosi, Adekunle T., Coakley, Sean, Giacomotto, Jean, Blum, Ailisa, Joensuu, Merja, Wallis, Tristan P., Lo, Harriet P., Budnar, Srikanth, Rae, James, Ferguson, Charles, Bastiani, Michele, Thomas, Walter G., Pardon, Els, Steyaert, Jan, Yap, Alpha S., Goodhill, Geoffrey J., Hilliard, Massimo A., Parton, Robert G. and Meunier, Frédéric A. (2020). Modular transient nanoclustering of activated β2-adrenergic receptors revealed by single-molecule tracking of conformation-specific nanobodies. Proceedings of the National Academy of Sciences of the United States of America, 117 (48), 30476-30487. doi: 10.1073/pnas.2007443117
2020
Journal Article
Radial contractility of actomyosin rings facilitates axonal trafficking and structural stability
Wang, Tong, Li, Wei, Martin, Sally, Papadopulos, Andreas, Joensuu, Merja, Liu, Chunxia, Jiang, Anmin, Shamsollahi, Golnoosh, Amor, Rumelo, Lanoue, Vanessa, Padmanabhan, Pranesh and Meunier, Frédéric A. (2020). Radial contractility of actomyosin rings facilitates axonal trafficking and structural stability. Journal of Cell Biology, 219 (5) e201902001, 1-S7. doi: 10.1083/jcb.201902001
2020
Book Chapter
Single-molecule imaging of recycling synaptic vesicles in live neurons
Joensuu, Merja, Martínez-Mármol, Ramon, Mollazade, Mahdie, Padmanabhan, Pranesh and Meunier, Frédéric A. (2020). Single-molecule imaging of recycling synaptic vesicles in live neurons. Single molecule microscopy in neurobiology. (pp. 81-114) edited by Nobuhiko Yamamoto and Yasushi Okada. New York, NY United States: Humana Press. doi: 10.1007/978-1-0716-0532-5_5
2019
Journal Article
Phospholipases in neuronal function: a role in learning and memory?
Joensuu, Merja, Wallis, Tristan P., Saber, Saber H. and Meunier, Frédéric A. (2019). Phospholipases in neuronal function: a role in learning and memory?. Journal of Neurochemistry, 153 (3) jnc.14918, e14918-333. doi: 10.1111/jnc.14918
2019
Journal Article
GORAB scaffolds COPI at the trans-Golgi for efficient enzyme recycling and correct protein glycosylation
Witkos, Tomasz M., Chan, Wing Lee, Joensuu, Merja, Rhiel, Manuel, Pallister, Ed, Thomas-Oates, Jane, Mould, A. Paul, Mironov, Alex A., Biot, Christophe, Guerardel, Yann, Morelle, Willy, Ungar, Daniel, Wieland, Felix T., Jokitalo, Eija, Tassabehji, May, Kornak, Uwe and Lowe, Martin (2019). GORAB scaffolds COPI at the trans-Golgi for efficient enzyme recycling and correct protein glycosylation. Nature Communications, 10 (1) 127, 127. doi: 10.1038/s41467-018-08044-6
2019
Journal Article
VAMP2 Binding to Munc18-1 Domain 3a Controls the Nanoscale Reorganization of the Plasma Membrane and Vesicle Interface During Vesicular Priming
Kasula, Ravikiran, Blum, Ailisa, Salla-Martret, Merce, Chai, Ye Jin, Jiang, Anmin, Wallis, Tristan P., Gormal, Rachel S., Brouillet, Julie Z., Padmanabhan, Pranesh, Weeratunga, Saroja K., Livingstone, Emma K., Mollazade, Mahdie, Joensuu, Merja, Martínez-Mármol, Ramón, Collins, Brett M. and Meunier, Frederic (2019). VAMP2 Binding to Munc18-1 Domain 3a Controls the Nanoscale Reorganization of the Plasma Membrane and Vesicle Interface During Vesicular Priming. SSRN Electronic Journal. doi: 10.2139/ssrn.3362260
2018
Journal Article
Dendritic spine actin cytoskeleton in autism spectrum disorder
Joensuu, Merja, Lanoue, Vanessa and Hotulainen, Pirta (2018). Dendritic spine actin cytoskeleton in autism spectrum disorder. Progress in Neuro-Psychopharmacology and Biological Psychiatry, 84 (Pt B), 362-381. doi: 10.1016/j.pnpbp.2017.08.023
2018
Conference Publication
Super-resolving botulinum neurotoxin type A molecules: from surface landing to internalization in synaptic vesicles
Joensuu, Merja, Blum, Ailisa, Mollazade, Mahdie, Lanoue, Vanessa, Padmanabhan, Pranesh, Small, Christopher, Mahrhold, Stefan, Krez, Nadja, Rummel, Andreas and Meunier, Frederic A. (2018). Super-resolving botulinum neurotoxin type A molecules: from surface landing to internalization in synaptic vesicles. TOXINS 2019: Basic Science and Clinical Aspects of Botulinum and Other Neurotoxins, Copenhagen, Denmark, 16-19 January 2019. Kidlington, Oxford, United Kingdom: Pergamon Press. doi: 10.1016/j.toxicon.2018.11.122
2017
Conference Publication
Nanoscale imaging of botulinum neurotoxin type a retrograde axonal trafficking
Harper, Callista B., Wang, Tong, Joensuu, Merja, Papadopulos, Andreas and Meunier, Frederic A. (2017). Nanoscale imaging of botulinum neurotoxin type a retrograde axonal trafficking. TOXINS: Basic Science and Clinical Aspects of Botulinum and other Neurotoxins, Madrid, Spain, 18-21 January 2017. Oxford, United Kingdom: Pergamon Press. doi: 10.1016/j.toxicon.2016.11.106
2016
Journal Article
NOGO-A/RTN4A and NOGO-B/RTN4B are simultaneously expressed in epithelial, fibroblast and neuronal cells and maintain ER morphology
Ramo, Olli, Kumar, Darshan, Gucciardo, Erika, Joensuu, Merja, Saarekas, Maiju, Vihinen, Helena, Belevich, Ilya, Smolander, Olli-Pekka, Qian, Kui, Auvinen, Petri and Jokitalo, Eija (2016). NOGO-A/RTN4A and NOGO-B/RTN4B are simultaneously expressed in epithelial, fibroblast and neuronal cells and maintain ER morphology. Scientific Reports, 6 (1) 35969. doi: 10.1038/srep35969
2016
Journal Article
Microscopy image browser: a platform for segmentation and analysis of multidimensional datasets
Belevich, Ilya, Joensuu, Merja, Kumar, Darshan, Vihinen, Helena and Jokitalo, Eija (2016). Microscopy image browser: a platform for segmentation and analysis of multidimensional datasets. PLoS Biology, 14 (1) e1002340, e1002340. doi: 10.1371/journal.pbio.1002340
2015
Journal Article
ER sheet-tubule balance is regulated by an array of actin filaments and microtubules
Joensuu, Merja and Jokitalo, Eija (2015). ER sheet-tubule balance is regulated by an array of actin filaments and microtubules. Experimental Cell Research, 337 (2), 170-178. doi: 10.1016/j.yexcr.2015.04.009
2015
Journal Article
Genome-wide RNAi screen for nuclear actin reveals a network of cofilin regulators
Dopie, Joseph, Rajakyla, Eeva K., Joensuu, Merja S., Huet, Guillaume, Ferrantelli, Evelina, Xie, Tiao, Jaalinoja, Harri, Jokitalo, Eija and Vartiainen, Maria K. (2015). Genome-wide RNAi screen for nuclear actin reveals a network of cofilin regulators. Journal of Cell Science, 128 (13), 2388-2400. doi: 10.1242/jcs.169441
Funding
Current funding
Past funding
Supervision
Availability
- Dr Merja Joensuu is:
- Available for supervision
Looking for a supervisor? Read our advice on how to choose a supervisor.
Supervision history
Current supervision
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Doctor Philosophy
Lipid metabolism regulates neuronal energy homeostasis, protein N-myristoylation and membrane trafficking
Principal Advisor
Other advisors: Dr Hannah Leeson
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Doctor Philosophy
Mechanisms of RGD-Functionalized Nanomaterials in Tumor Cell Biology
Associate Advisor
Other advisors: Dr Wenyi Gu, Professor Michael Monteiro
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Doctor Philosophy
Identifying the mechanism of regeneration in early brain development
Associate Advisor
Other advisors: Dr Selin Pars, Dr Giovanni Pietrogrande
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Doctor Philosophy
Consciousness and Unconsciousness in Brain Organoids
Associate Advisor
Other advisors: Honorary Professor Andre Van Zundert, Dr Selin Pars, Professor Bruno van Swinderen
Completed supervision
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2024
Doctor Philosophy
Bidirectional modulation of cellular saturated fatty acids as potential therapeutics for neurological conditions and viral infections
Principal Advisor
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2022
Doctor Philosophy
Identifying Key Changes in Brain Free Fatty Acids Associated with Memory in Health, Ageing and Disease: A Mechanistic Study
Associate Advisor
Other advisors: Dr Tristan Wallis, Professor Frederic Meunier
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2022
Doctor Philosophy
Characterization and role of lateral trapping and nanocluster organization of the endocytic machinery
Associate Advisor
Other advisors: Professor Frederic Meunier
Media
Enquiries
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- Neuronal energy metabolism
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