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Professor Nigel Beebe
Professor

Nigel Beebe

Email: 
Phone: 
+61 7 336 52466

Overview

Background

As a teaching and research academic within the School of the Environment at the University of Queensland, I research the biology and genetics of mosquitoes in our region of the Indo-Pacific that delivers fundamental knowledge into the role mosquitoes play in mosquito-borne disease. This work moves across basic and applied research and has advanced our understanding of mosquitoes, their evolution, species’ distributions, permitting better focused mosquito control to be imagined. More recent research involves exploring new environmentally friendly biological control tools such as using the Wolbachia bacterium and genetic modification to combat mosquito-borne disease.

For more detail on my research please see below and at this link http://www.nigelbeebe.com

Availability

Professor Nigel Beebe is:
Available for supervision
Media expert

Research interests

  • Mosquito Biology and Evolution

    At a fundamental level, research outcomes from my team continue to answer important questions about which mosquito species transmit disease pathogens to humans. From developing the first molecular diagnostics to distinguish closely related cryptic mosquito species, we have identified the subset of vector species from the many non-vector species. We have mapped where they exist (distribution) and studying why they are there (ecology) and how their populations genetically connect and move (population genetics/genomics). This work has led to recent more applied research that address issues of mosquito control in the Indo-Pacific and beyond by developing new species-specific biological control tools. I feel we are at the beginning of an exciting journey in developing new environmentally friendly mosquito control tools for Australia, the Indo-Pacific region and beyond. Funding for this work has been through the Bill and Melinda Gates Foundation and NHMRC. There are four research themes which constitute my past, present and future research.

  • 1) Malaria vectors of our region

    Anopheles mosquitoes (malaria vectors): this work revolves around describing the evolution, distribution, biology and behaviour of malaria vectors throughout our Indo-Pacific region. Population genetics and genomics investigations are now leading to new opportunities for mosquito control including exploring if we can use synthetic biology to develop a malaria resistant mosquito for the Indo-Pacific (detailed in #4 below).

  • 2) Exotic urban arbovirus vectors and biosecurity threats

    The dengue vector Aedes aegypti is endemic to Queensland but presents a major biosecurity threat to the rest of Australia while the exotic invasive Asian tiger mosquito Aedes albopictus has arrived in the Torres Strait from Indonesia and now presents a serious incursion threat to mainland Australia. Our research involves addressing these threats by better understanding their historic and contemporary movement and developing novel biological control population suppression tools (detailed in #4 below).

  • 3) Endemic arbovirus vectors and biosecurity threats

    Culex mosquito species include Australia’s major endemic arbovirus vectors including Ross River virus, Barmah Forrest virus as well as the recent explosion of Japanese encephalitis through inland Australia in 2022. Evolutionary and population genetics approaches are providing vital information on the vector species status and the development molecular diagnostics to study these cryptic mosquito species in our region.

  • 4) Biological control of mosquitoes

    Two species-specific mosquito control initiatives are now in development. The first initiative utilises reproductively incompatible Wolbachia-infected male mosquitoes for population suppression was supported through NHMRC and Verily Life Science. successful proof of concept field trials were performed in 2018-19 in north Queensland towns. The second initiative sees our team exploring the idea of a malaria resistant Anopheles mosquito for our region using CRISPR-Cas9 gene-drive tools that can drive super-Mendelian inheritance a malaria resistant phenotype. This work is currently supported by the Bill and Melinda Gates Foundation and NHMRC.

Research impacts

From my development of the first molecular tools to study the many cryptic mosquito species during my PhD, I have been fortunate to have grown the field of vector biology, genetics and now vector control across three decades, acting as a crucial reference point for this work in Australasia and the Indo-Pacific region. Below are two examples of the ongoing evolution of fundamental scientific research and speaks to the exciting space where baseline information intersects with the frontiers of innovation and imagination.

One exciting impact and outcome was in determining exactly which mosquito species in our region transmit malaria because they exist as many isomorphic cryptic species that require molecular diagnostic to distinguish each species. Through a productive multi-decade collaboration with the Australian Defense Force, we determined the subset of malaria vector species in our region, from the many non-vector species, mapped their spatial distribution through the Indo-Pacific using over 1700 regional sampling sites, and are now describing their population genetics/genomics structures and gene flow barriers through this region. This fantastic resource is feeding new ways to think about mosquito control including exploring the use of genetic modification and gene drive technologies as environmentally friendly species-specific mosquito control.

The second research impact was in the developing a reproductively incompatible male release population suppression technology for the dengue mosquito Aedes aegypti. As males don’t bite they can be safely be released on mass, and making them incompatible (essentially sterile) with a naturally occuring Wolbachia bacterium provided the tool to execute a proof of concept treatment/control field trial in small towns in the Queensland Cassowary coast in north Queensland during the first few months of 2018 (called “Debug Innisfail”). In releasing 3 million males over 20 weeks we saw between 80-90% Ae. aegypti adult suppression in our treatment vs control landscapes and the suppression effect was observes the next season in two of the three treatment towns. Now thanks to NHMRC we are now developing this technology into a more deployable product.

Works

Search Professor Nigel Beebe’s works on UQ eSpace

118 works between 1994 and 2025

101 - 118 of 118 works

2001

Journal Article

Ribosomal DNA spacer genotypes of the Anopheles bancroftii group (Diptera : Culicidae) from Australia and Papua New Guinea

Beebe, NW, Maung, J, van den Hurk, AF, Ellis, JT and Cooper, RD (2001). Ribosomal DNA spacer genotypes of the Anopheles bancroftii group (Diptera : Culicidae) from Australia and Papua New Guinea. Insect Molecular Biology, 10 (5), 407-413. doi: 10.1046/j.0962-1075.2001.00278.x

Ribosomal DNA spacer genotypes of the Anopheles bancroftii group (Diptera : Culicidae) from Australia and Papua New Guinea

2001

Journal Article

Field evaluation of repellents containing deet and AI3-37220 against Anopheles koliensis in Papua New Guinea

Frances, SP, Cooper, RD, Popat, S and Beebe, NW (2001). Field evaluation of repellents containing deet and AI3-37220 against Anopheles koliensis in Papua New Guinea. Journal of the American Mosquito Control Association, 17 (1), 42-44.

Field evaluation of repellents containing deet and AI3-37220 against Anopheles koliensis in Papua New Guinea

2001

Journal Article

Molecular taxonomic investigations of members in the Culex Sitiens subgroup of mosquitos from Australia and Papua New Guinea

Beebe, N. W., Van Den Hurk, A., Chapman, H., Frances, S.P. and Cooper, R. D. (2001). Molecular taxonomic investigations of members in the Culex Sitiens subgroup of mosquitos from Australia and Papua New Guinea. Arbovirus Research in Australia, 8, 8-13.

Molecular taxonomic investigations of members in the Culex Sitiens subgroup of mosquitos from Australia and Papua New Guinea

2000

Journal Article

A phylogenetic study of the Anopheles punctulatus group of malaria vectors comparing rDNA sequence alignments derived from the mitochondrial and nuclear small ribosomal subunits

Beebe, NW, Cooper, RD, Morrison, DA and Ellis, JT (2000). A phylogenetic study of the Anopheles punctulatus group of malaria vectors comparing rDNA sequence alignments derived from the mitochondrial and nuclear small ribosomal subunits. Molecular Phylogenetics and Evolution, 17 (3), 430-436. doi: 10.1006/mpev.2000.0853

A phylogenetic study of the Anopheles punctulatus group of malaria vectors comparing rDNA sequence alignments derived from the mitochondrial and nuclear small ribosomal subunits

2000

Journal Article

Rediscovery of Anopheles (cellia) clowi (Diptera : culicidae), a rarely recorded member of the Anopheles punctulatus group

Cooper, RD, Waterson, DGE, Bangs, HJ and Beebe, NW (2000). Rediscovery of Anopheles (cellia) clowi (Diptera : culicidae), a rarely recorded member of the Anopheles punctulatus group. Journal of Medical Entomology, 37 (6), 840-845. doi: 10.1603/0022-2585-37.6.840

Rediscovery of Anopheles (cellia) clowi (Diptera : culicidae), a rarely recorded member of the Anopheles punctulatus group

2000

Journal Article

Subset partitioning of the ribosomal DNA small subunit and its effects on the phylogeny of the Anopheles punctulatus group

Beebe, NW, Cooper, RD, Morrison, DA and Ellis, JT (2000). Subset partitioning of the ribosomal DNA small subunit and its effects on the phylogeny of the Anopheles punctulatus group. Insect Molecular Biology, 9 (5), 515-520. doi: 10.1046/j.1365-2583.2000.00211.x

Subset partitioning of the ribosomal DNA small subunit and its effects on the phylogeny of the Anopheles punctulatus group

2000

Journal Article

Differential ecology of Anopheles punctulatus and three members of the Anopheles farauti complex of mosquitoes on Guadalcanal, Solomon Islands, identified by PCR-RFLP analysis

Beebe, NW, Bakote'e, B, Ellis, JT and Cooper, RD (2000). Differential ecology of Anopheles punctulatus and three members of the Anopheles farauti complex of mosquitoes on Guadalcanal, Solomon Islands, identified by PCR-RFLP analysis. Medical and Veterinary Entomology, 14 (3), 308-312. doi: 10.1046/j.1365-2915.2000.00248.x

Differential ecology of Anopheles punctulatus and three members of the Anopheles farauti complex of mosquitoes on Guadalcanal, Solomon Islands, identified by PCR-RFLP analysis

2000

Journal Article

Populations of the south-west Pacific malaria vector Anopheles farauti s.s. revealed by ribosomal DNA transcribed spacer polymorphisms

Beebe, Nigel W., Cooper, R. D., Foley, Desmond H and Ellis, John T. (2000). Populations of the south-west Pacific malaria vector Anopheles farauti s.s. revealed by ribosomal DNA transcribed spacer polymorphisms. Heredity, 84 (2), 244-253. doi: 10.1046/j.1365-2540.2000.00665.x

Populations of the south-west Pacific malaria vector Anopheles farauti s.s. revealed by ribosomal DNA transcribed spacer polymorphisms

2000

Journal Article

Systematics of malaria vectors with particular reference to the Anopheles punctulatus group (vol 30, pg 1, 2000)

Beebe, NW and Cooper, RD (2000). Systematics of malaria vectors with particular reference to the Anopheles punctulatus group (vol 30, pg 1, 2000). International Journal for Parasitology, 30 (1), 1-17. doi: 10.1016/S0020-7519(99)00171-X

Systematics of malaria vectors with particular reference to the Anopheles punctulatus group (vol 30, pg 1, 2000)

2000

Journal Article

Seasonal abundance of Anopheles farauti (Diptera: Culicidae) sibling species in Far North Queensland, Australia

Van Den Hurk, A., Cooper, R. D., Beebe, N. W., Williams, G. M., Bryan, J. H. and Ritchie, S. A. (2000). Seasonal abundance of Anopheles farauti (Diptera: Culicidae) sibling species in Far North Queensland, Australia. Journal of Medical Entomology, 37 (1), 153-161. doi: 10.1603/0022-2585-37.1.153

Seasonal abundance of Anopheles farauti (Diptera: Culicidae) sibling species in Far North Queensland, Australia

1999

Journal Article

DNA sequence analysis of the ribosomal DNA ITS2 region for the Anopheles punctulatus group of mosquitoes

Beebe, NW, Ellis, JT, Cooper, RD and Saul, A (1999). DNA sequence analysis of the ribosomal DNA ITS2 region for the Anopheles punctulatus group of mosquitoes. Insect Molecular Biology, 8 (3), 381-390. doi: 10.1046/j.1365-2583.1999.83127.x

DNA sequence analysis of the ribosomal DNA ITS2 region for the Anopheles punctulatus group of mosquitoes

1999

Journal Article

Malaria CD-ROM

Beebe, N (1999). Malaria CD-ROM. International Journal for Parasitology, 29 (2), 365-365. doi: 10.1016/S0020-7519(98)00215-X

Malaria CD-ROM

1997

Journal Article

Responses of mosquitoes of the Anopheles farauti complex to 1-octen-3-ol and light in combination with carbon dioxide in northern Queensland, Australia

Vandenhurk, AF, Beebe, NW and Ritchie, SA (1997). Responses of mosquitoes of the Anopheles farauti complex to 1-octen-3-ol and light in combination with carbon dioxide in northern Queensland, Australia. Medical and Veterinary Entomology, 11 (2), 177-180.

Responses of mosquitoes of the Anopheles farauti complex to 1-octen-3-ol and light in combination with carbon dioxide in northern Queensland, Australia

1997

Journal Article

Anopheline mosquitoes of the western province of Papua New Guinea

Cooper, RD, Waterson, DGE, Kupo, M, Foley, DH, Beebe, NW and Sweeney, AW (1997). Anopheline mosquitoes of the western province of Papua New Guinea. Journal of the American Mosquito Control Association, 13 (1), 5-12.

Anopheline mosquitoes of the western province of Papua New Guinea

1996

Journal Article

DNA probes for the Anopheles punctulatus complex

Beebe, NW, Foley, DH, Cooper, RD, Bryan, JH and Saul, A (1996). DNA probes for the Anopheles punctulatus complex. American Journal of Tropical Medicine and Hygiene, 54 (4), 395-398. doi: 10.4269/ajtmh.1996.54.395

DNA probes for the Anopheles punctulatus complex

1996

Journal Article

Misidentification of a Philippine malaria vector revealed by allozyme and ribosomal DNA markers

Foley, DH, Beebe, N, Torres, E and Saul, A (1996). Misidentification of a Philippine malaria vector revealed by allozyme and ribosomal DNA markers. American Journal of Tropical Medicine and Hygiene, 54 (1), 46-48. doi: 10.4269/ajtmh.1996.54.46

Misidentification of a Philippine malaria vector revealed by allozyme and ribosomal DNA markers

1995

Journal Article

Discrimination of All Members of the Anophelespunctulatus Complex by Polymerase Chain-Reaction Restriction-Fragment-Length-Polymorphism Analysis

Beebe, NW and Saul, A (1995). Discrimination of All Members of the Anophelespunctulatus Complex by Polymerase Chain-Reaction Restriction-Fragment-Length-Polymorphism Analysis. American Journal of Tropical Medicine and Hygiene, 53 (5), 478-481. doi: 10.4269/ajtmh.1995.53.478

Discrimination of All Members of the Anophelespunctulatus Complex by Polymerase Chain-Reaction Restriction-Fragment-Length-Polymorphism Analysis

1994

Journal Article

DNA Probes for Identifying the Members of the Anopheles Punctulatus Complex in Papua-New-Guinea

Beebe, N.W., Foley, D.H., Saul, A., Cooper, L., Bryan, J.H. and Burkot, T.R. (1994). DNA Probes for Identifying the Members of the Anopheles Punctulatus Complex in Papua-New-Guinea. American Journal of Tropical Medicine and Hygiene, 50 (2), 229-234. doi: 10.4269/ajtmh.1994.50.229

DNA Probes for Identifying the Members of the Anopheles Punctulatus Complex in Papua-New-Guinea

Funding

Current funding

  • 2022 - 2025
    Removing mosquito populations by releasing incompatible males: a species specific biocontrol for urban arbovirus vectors
    NHMRC IDEAS Grants
    Open grant
  • 2022 - 2025
    The development and potential of a malaria resistant mosquito for the Southwest Pacific
    NHMRC IDEAS Grants
    Open grant

Past funding

  • 2019 - 2024
    Rebooting mosquito (Diptera: Culicidae) biosystematics in Australia: integrative taxonomy of the subgenus Culex (Commonwealth Department of the Environment and Energy ABRS grant administered by CSIRO)
    CSIRO
    Open grant
  • 2015 - 2019
    Release the sterile males: a new direction for mosquito population control technologies (NHMRC Project Grant administered by CSIRO)
    CSIRO
    Open grant
  • 2014 - 2018
    Evolutionary investigations into insect olfaction and host choice using a mosquito model system.
    The Hermon Slade Foundation
    Open grant
  • 2014 - 2016
    Developing of a population genetics toolbox and regional spatial database for Aedes aegypti and Aedes albopictus
    Western Australia Department of Health
    Open grant
  • 2012 - 2014
    Dynamics of malaria transmission stages in the host and vector: bottlenecks and their impact on transmission and parasite population diversity (Administered by WEHI)
    Walter & Eliza Hall Institute of Medical Research (WEHI)
    Open grant
  • 2012
    High Throughput Genotyping using Paralleled and Miniaturized DNA amplification.
    UQ Major Equipment and Infrastructure
    Open grant
  • 2012 - 2016
    Natural variation and genetic basis of dengue virus transmission rate in Australian mosquitoes (NHMRC project administered by Monash University)
    Monash University
    Open grant
  • 2011 - 2013
    Laboratory analysis and supplies for the malaria transmission consortium supplement
    James Cook University
    Open grant
  • 2010 - 2018
    Research to control and eliminate malaria in SE Asia and SW Pacific - Project 2 - Transmission (NIH/ICEMR administered by Case Western Reserve University, USA)
    Case Western Reserve University
    Open grant
  • 2010 - 2013
    Urbanism, Climate Adaptation and Health (CSIRO Flagship Collaboration Fund lead by Australian National Unversity)
    Australian National University
    Open grant
  • 2009
    Building Capacity in Quantitative Genomics
    UQ School/Centre Co-Funding
    Open grant
  • 2008 - 2009
    Studying Aedes aegypti olfaction cues may provide new tools to control mosquitoes
    UQ New Staff Research Start-Up Fund
    Open grant
  • 2008 - 2023
    UQ/CSIRO Joint Appointment: Lecturer/Senior Lecturer in Vector Biology
    CSIRO
    Open grant

Supervision

Availability

Professor Nigel Beebe is:
Available for supervision

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Available projects

  • New Aedes incompatable/sterile population suppression tool development to control mosquitoes

  • Genome volution exploration in malaria mosquitoes from the Southwest Pacific

  • Molecular ecology of the arbovirus vectors in the Culex sitiens subgroup through Australasia

  • Exploring mosquito genetic modification technologies as a vector borne disease control tool

  • Genome evolution exploration in malaria mosquitoes from the Southwest Pacific

  • Molecular ecology of the arbovirus vectors in the Culex sitiens subgroup through Australasia

  • Exploring mosquito genetic modification technologies as a vector borne disease control tool

  • New Aedes incompatable/sterile population suppression tool development to control mosquitoes

  • Molecular diagnostics development for identifying cryptic mosquito species in Australasia

  • Expanding Aedes population suppression and population replacement tools using Wolbachia

    This project aims to further develop and refine our Aedes mosquito population suppression tools using Wolbachia-induced incompatibility and sterility. Wolbachia, a naturally occurring bacterium, can be introduced into Aedes aegypti and Aedes albopictus populations to create incompatibilities between infected and uninfected mosquitoes, leading to reduced reproduction and population decline. By optimizing Wolbachia strains and release strategies, this project seeks to increase the repertoire of tools to either suppress mosquito populations, or replac mosquito populations thereby decreasing the transmission of diseases like dengue, Zika, and chikungunya.

  • Genome evolution exploration in malaria mosquitoes from the Southwest Pacific

    Exploring genome evolution in malaria mosquitoes (Anopheles) from the Southwest Pacific provides valuable insights into the mechanisms driving adaptation in these disease vectors. We have identified differences in biting behavior, including host preferences and for feeding times, that are likely shaped by both genetic and environmental factors. In the unique biogeographically diverse ecological settings of the Southwest Pacific, some mosquitoes have evolved distinct biting patterns in response to human activity, climate, and the presence of alternative hosts. Genomic studies can help reveal the underlying genetic changes that drive these behaviors, shedding light on how mosquitoes might shift from biting animals to humans or change their activity periods to avoid control measures. Understanding these behavioral adaptations is key to developing new and vector control strategies.

  • Molecular ecology of the arbovirus vectors in the Culex sitiens subgroup through Australasia

    This project aims to investigate the molecular ecology of arbovirus vectors within the Culex sitiens subgroup across Australasia, and particularly the main vector Culex annulirostris. The project will ficus on understanding the genetic diversity, population structure, and evolutionary dynamics that influence their ecology and potential to transmit arboviruses such as the endemic Ross River virus and the recent exotic Japanese encephalitis outbreak that occurred in 2022.

  • Modeling Gene Drive spread in the Southwest Pacific malaria mosquito Anopheles farauti

    This PhD project focuses on modeling gene drive strategies in Anopheles farauti, a primary malaria vector in the Southwest Pacific, using MG-Drive modeling framework. The project will involve simulating various gene drive constructs to assess their potential impact on mosquito populations and malaria transmission. By exploring factors such as drive efficiency, resistance development, and ecological impact, the research aims to optimize gene drive designs for effective and sustainable vector control in the future. The outcomes will provide valuable insights into the feasibility and risks of deploying gene drives in Anopheles farauti, contributing to the development of innovative malaria control strategies.

  • Field-ready molecular diagnostics for identifying cryptic mosquito species in Australasia

    This project aims to develop portable molecular diagnostics for rapid identification of cryptic mosquito species in the Indo-Pacific region. By designing and validating molecular assays that target specific genetic markers, we will create easy-to-use diagnostic kits suitable for field use. These tools will enhance mosquito surveillance by enabling accurate species identification in real-time, critical for effective vector control. Field trials will validate the kits' performance, and local health teams will be trained to integrate these diagnostics into routine surveillance, improving mosquito control and disease management efforts across the region.

Supervision history

Current supervision

  • Doctor Philosophy

    Molecular ecology and Wolbachia bacterium status of the Australian mosquito Aedes notoscriptus (Skuse)

    Principal Advisor

    Other advisors: Professor Sassan Asgari

  • Doctor Philosophy

    Exploring the development of a malaria refractory Anopheles farauti

    Principal Advisor

    Other advisors: Professor Sassan Asgari

  • Doctor Philosophy

    Molecular ecology and Wolbachia bacterium status of the Australian mosquito Aedes notoscriptus (Skuse)

    Principal Advisor

    Other advisors: Professor Sassan Asgari

  • Doctor Philosophy

    The development and potential for a malaria resistant Anopheles farauti

    Principal Advisor

    Other advisors: Professor Sassan Asgari

  • Doctor Philosophy

    Investigating molecular interactions of mosquito-Wolbachia-virus interactions

    Associate Advisor

    Other advisors: Professor Sassan Asgari

  • Doctor Philosophy

    Investigating molecular interactions of mosquito-Wolbachia-virus interactions

    Associate Advisor

    Other advisors: Professor Sassan Asgari

  • Doctor Philosophy

    Investigating molecular interactions of mosquito-Wolbachia-virus interactions

    Associate Advisor

    Other advisors: Professor Sassan Asgari

  • Doctor Philosophy

    Role of miRNA regulation in metamorphosis and fecundity of Aedes aegypti

    Associate Advisor

    Other advisors: Dr Mazhar Hussain, Dr Kayvan Etebari, Professor Sassan Asgari

  • Doctor Philosophy

    Investigating molecular interactions of mosquito-Wolbachia-virus interactions

    Associate Advisor

    Other advisors: Professor Sassan Asgari

Completed supervision

Media

Enquiries

Contact Professor Nigel Beebe directly for media enquiries about:

  • Arbovirus Vectors
  • Exotic mosquito incursions
  • Malaria vectors
  • Mosquito-borne disease

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