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2023

Conference Publication

Advances In Polygenic Score Methods And Applications In Psychiatric Genetics

Vilhjalmsson, Bjarni, Zeng, Jian and Wray, Naomi (2023). Advances In Polygenic Score Methods And Applications In Psychiatric Genetics. World Congress of Psychiatric Genetics WCPG 2023, Montreal, QC Canada, 10-14 October 2023. Amsterdam, Netherlands: Elsevier. doi: 10.1016/j.euroneuro.2023.08.062

Advances In Polygenic Score Methods And Applications In Psychiatric Genetics

2023

Conference Publication

IDENTIFICATION OF CELL TYPES AND CELLULAR DYNAMICS GENETICALLY ASSOCIATED WITH BRAIN DISORDERS AND COGNITIVE TRAITS

Yao, Shuyang, Harder, Arvid, Darki, Fahimeh, Li, Ang, Zeng, Jian, Nikouei, Kasra, Lundstrom, Johan, Wray, Naomi, Lu, Yi, Sullivan, Patrick and Hjerling-Leffler, Jens (2023). IDENTIFICATION OF CELL TYPES AND CELLULAR DYNAMICS GENETICALLY ASSOCIATED WITH BRAIN DISORDERS AND COGNITIVE TRAITS. World Congress of Psychiatric Genetics (WCPG), Montreal Canada, Oct 10-14, 2023. AMSTERDAM: ELSEVIER. doi: 10.1016/j.euroneuro.2023.08.160

IDENTIFICATION OF CELL TYPES AND CELLULAR DYNAMICS GENETICALLY ASSOCIATED WITH BRAIN DISORDERS AND COGNITIVE TRAITS

2023

Journal Article

GWAS meta-analysis of suicide attempt: identification of 12 genome-wide significant loci and implication of genetic risks for specific health factors

Docherty, Anna R., Mullins, Niamh, Ashley-Koch, Allison E., Qin, Xuejun, Coleman, Jonathan R.I., Shabalin, Andrey, Kang, JooEun, Murnyak, Balasz, Wendt, Frank, Adams, Mark, Campos, Adrian I., DiBlasi, Emily, Fullerton, Janice M., Kranzler, Henry R., Bakian, Amanda V., Monson, Eric T., Rentería, Miguel E., Walss-Bass, Consuelo, Andreassen, Ole A., Behera, Chittaranjan, Bulik, Cynthia M., Edenberg, Howard J., Kessler, Ronald C., Mann, J. John, Nurnberger, John I., Pistis, Giorgio, Streit, Fabian, Ursano, Robert J., Polimanti, Renato ... German Borderline Genomics Consortium (2023). GWAS meta-analysis of suicide attempt: identification of 12 genome-wide significant loci and implication of genetic risks for specific health factors. American Journal of Psychiatry, 180 (10), 723-738. doi: 10.1176/appi.ajp.21121266

GWAS meta-analysis of suicide attempt: identification of 12 genome-wide significant loci and implication of genetic risks for specific health factors

2023

Conference Publication

Exploring The Genetic Association Between Multi-omic Traits And Psychiatric Diagnosis, Prognosis And Treatment Response

Albiñana, Clara, Liu, Xiaoqin, Zhu, Zhihong, Agerbo, Esben, Bo Mortensen, Preben, McGrath, John, Wray, Naomi and Vilhjalmsson, Bjarni (2023). Exploring The Genetic Association Between Multi-omic Traits And Psychiatric Diagnosis, Prognosis And Treatment Response. World Congress of Psychiatric Genetics WCPG 2023, Montreal, QC Canada, 10-14 October 2023. Amsterdam, Netherlands: Elsevier. doi: 10.1016/j.euroneuro.2023.08.212

Exploring The Genetic Association Between Multi-omic Traits And Psychiatric Diagnosis, Prognosis And Treatment Response

2023

Conference Publication

Highlighting human brain cell types and regions for the genetic risk of schizophrenia and other psychiatric disorders

Yao, Shuyang, Harder, Arvid, Darki, Fahimeh, Li, Ang, Zeng, Jian, Nikouei, Kasra, Lundström, Johan, Wray, Naomi, Lu, Yi, Sullivan, Patrick and Hjerling-Leffler, Jens (2023). Highlighting human brain cell types and regions for the genetic risk of schizophrenia and other psychiatric disorders. World Congress of Psychiatric Genetics (WCPG) 2023, Montreal, Canada, 10-14 October 2023. Amsterdam, Netherlands: Elsevier. doi: 10.1016/j.euroneuro.2023.08.161

Highlighting human brain cell types and regions for the genetic risk of schizophrenia and other psychiatric disorders

2023

Journal Article

A common genetic factor underlies genetic risk for gynaecological and reproductive disorders and is correlated with risk to depression

Kiewa, Jacqueline, Mortlock, Sally, Meltzer-Brody, Samantha, Middeldorp, Christel, Wray, Naomi R. and Byrne, Enda M. (2023). A common genetic factor underlies genetic risk for gynaecological and reproductive disorders and is correlated with risk to depression. Neuroendocrinology, 113 (10), 1059-1075. doi: 10.1159/000533413

A common genetic factor underlies genetic risk for gynaecological and reproductive disorders and is correlated with risk to depression

2023

Conference Publication

Methylome-wide Association Study Of Antidepressant Exposure

Davyson, Ella, Shen, Xueyi, Adams, Mark, Marioni, Riccardo, Barker, Lauren, Wray, Naomi and McIntosh, Andrew (2023). Methylome-wide Association Study Of Antidepressant Exposure. World Congress of Psychiatric Genetics WCPG 2023, Montreal, QC Canada, 10-14 October 2023. Amsterdam, Netherlands: Elsevier. doi: 10.1016/j.euroneuro.2023.08.177

Methylome-wide Association Study Of Antidepressant Exposure

2023

Journal Article

Joint analysis of GWAS and multi-omics QTL summary statistics reveals a large fraction of GWAS signals shared with molecular phenotypes

Wu, Yang, Qi, Ting, Wray, Naomi R., Visscher, Peter M., Zeng, Jian and Yang, Jian (2023). Joint analysis of GWAS and multi-omics QTL summary statistics reveals a large fraction of GWAS signals shared with molecular phenotypes. Cell Genomics, 3 (8) 100344, 100344. doi: 10.1016/j.xgen.2023.100344

Joint analysis of GWAS and multi-omics QTL summary statistics reveals a large fraction of GWAS signals shared with molecular phenotypes

2023

Journal Article

Schizophrenia-associated somatic copy-number variants from 12,834 cases reveal recurrent NRXN1 and ABCB11 disruptions

Maury, Eduardo A., Sherman, Maxwell A., Genovese, Giulio, Gilgenast, Thomas G., Kamath, Tushar, Burris, S. J., Rajarajan, Prashanth, Flaherty, Erin, Akbarian, Schahram, Chess, Andrew, McCarroll, Steven A., Loh, Po-Ru, Phillips-Cremins, Jennifer E., Brennand, Kristen J., Macosko, Evan Z., Walters, James T.R., O'Donovan, Michael, Sullivan, Patrick, Marshall, Christian R., Merico, Daniele, Thiruvahindrapuram, Bhooma, Wang, Zhouzhi, Scherer, Stephen W., Howrigan, Daniel P, Ripke, Stephan, Bulik-Sullivan, Brendan, Farh, Kai-How, Fromer, Menachem, Goldstein, Jacqueline I. ... Walsh, Christopher A. (2023). Schizophrenia-associated somatic copy-number variants from 12,834 cases reveal recurrent NRXN1 and ABCB11 disruptions. Cell Genomics, 3 (8) 100356, 1-21. doi: 10.1016/j.xgen.2023.100356

Schizophrenia-associated somatic copy-number variants from 12,834 cases reveal recurrent NRXN1 and ABCB11 disruptions

2023

Journal Article

Polygenic risk prediction: why and when out-of-sample prediction R2 can exceed SNP-based heritability

Wang, Xiaotong, Walker, Alicia, Revez, Joana A., Ni, Guiyan, Visscher, Peter M., Wray, Naomi R., Ripke, Stephan, Mattheisen, Manuel, Trzaskowski, Maciej, Byrne, Enda M., Abdellaoui, Abdel, Adams, Mark J., Agerbo, Esben, Air, Tracy M., Andlauer, Till F.M., Bacanu, Silviu-Alin, Bækvad-Hansen, Marie, Beekman, Aartjan T.F., Bigdeli, Tim B., Binder, Elisabeth B., Bryois, Julien, Buttenschøn, Henriette N., Bybjerg-Grauholm, Jonas, Cai, Na, Castelao, Enrique, Christensen, Jane Hvarregaard, Clarke, Toni-Kim, Coleman, Jonathan R.I., Colodro-Conde, Lucía ... Sullivan, Patrick F. (2023). Polygenic risk prediction: why and when out-of-sample prediction R2 can exceed SNP-based heritability. The American Journal of Human Genetics, 110 (7), 1207-1215. doi: 10.1016/j.ajhg.2023.06.006

Polygenic risk prediction: why and when out-of-sample prediction R2 can exceed SNP-based heritability

2023

Journal Article

150 risk variants for diverticular disease of intestine prioritize cell types and enable polygenic prediction of disease susceptibility

Wu, Yeda, Goleva, Slavina B., Breidenbach, Lindsay B., Kim, Minsoo, MacGregor, Stuart, Gandal, Michael J., Davis, Lea K. and Wray, Naomi R. (2023). 150 risk variants for diverticular disease of intestine prioritize cell types and enable polygenic prediction of disease susceptibility. Cell Genomics, 3 (7) 100326, 1-24. doi: 10.1016/j.xgen.2023.100326

150 risk variants for diverticular disease of intestine prioritize cell types and enable polygenic prediction of disease susceptibility

2023

Journal Article

Rare genetic variants underlie outlying levels of DNA methylation and gene-expression

Chundru, V. Kartik, Marioni, Riccardo E., Pendergast, James G. D., Lin, Tian, Beveridge, Allan J., Martin, Nicholas G, Montgomery, Grant W., Hume, David A., Deary, Ian J., Visscher, Peter M., Wray, Naomi R. and McRae, Allan F. (2023). Rare genetic variants underlie outlying levels of DNA methylation and gene-expression. Human Molecular Genetics, 32 (11), 1912-1921. doi: 10.1093/hmg/ddad028

Rare genetic variants underlie outlying levels of DNA methylation and gene-expression

2023

Journal Article

Using brain cell-type-specific protein interactomes to interpret neurodevelopmental genetic signals in schizophrenia

Hsu, Yu-Han H., Pintacuda, Greta, Liu, Ruize, Nacu, Eugeniu, Kim, April, Tsafou, Kalliopi, Petrossian, Natalie, Crotty, William, Suh, Jung Min, Riseman, Jackson, Martin, Jacqueline M., Biagini, Julia C., Mena, Daya, Ching, Joshua K.T., Malolepsza, Edyta, Li, Taibo, Singh, Tarjinder, Ge, Tian, Egri, Shawn B., Tanenbaum, Benjamin, Stanclift, Caroline R., Apffel, Annie M., Ripke, Stephan, Neale, Benjamin M., Corvin, Aiden, Walters, James T.R., Farh, Kai-How, Holmans, Peter A., Lee, Phil ... Lage, Kasper (2023). Using brain cell-type-specific protein interactomes to interpret neurodevelopmental genetic signals in schizophrenia. iScience, 26 (5) 106701, 1-28. doi: 10.1016/j.isci.2023.106701

Using brain cell-type-specific protein interactomes to interpret neurodevelopmental genetic signals in schizophrenia

2023

Journal Article

Leveraging base-pair mammalian constraint to understand genetic variation and human disease

Sullivan, Patrick F., Meadows, Jennifer R. S., Gazal, Steven, Phan, BaDoi N., Li, Xue, Genereux, Diane P., Dong, Michael X., Bianchi, Matteo, Andrews, Gregory, Sakthikumar, Sharadha, Nordin, Jessika, Roy, Ananya, Christmas, Matthew J., Marinescu, Voichita D., Wang, Chao, Wallerman, Ola, Xue, James, Yao, Shuyang, Sun, Quan, Szatkiewicz, Jin, Wen, Jia, Huckins, Laura M., Lawler, Alyssa, Keough, Kathleen C., Zheng, Zhili, Zeng, Jian, Wray, Naomi R., Li, Yun, Johnson, Jessica ... Zoonomia Consortium§ (2023). Leveraging base-pair mammalian constraint to understand genetic variation and human disease. Science, 380 (6643) eabn2937, 1-12. doi: 10.1126/science.abn2937

Leveraging base-pair mammalian constraint to understand genetic variation and human disease

2023

Journal Article

Interactions between the lipidome and genetic and environmental factors in autism

Yap, Chloe X., Henders, Anjali K., Alvares, Gail A., Giles, Corey, Huynh, Kevin, Nguyen, Anh, Wallace, Leanne, McLaren, Tiana, Yang, Yuanhao, Hernandez, Leanna M., Gandal, Michael J., Hansell, Narelle K., Cleary, Dominique, Grove, Rachel, Hafekost, Claire, Harun, Alexis, Holdsworth, Helen, Jellett, Rachel, Khan, Feroza, Lawson, Lauren P., Leslie, Jodie, Levis Frenk, Mira, Masi, Anne, Mathew, Nisha E., Muniandy, Melanie, Nothard, Michaela, Miller, Jessica L., Nunn, Lorelle, Strike, Lachlan T. ... The Busselton Health Study Investigators (2023). Interactions between the lipidome and genetic and environmental factors in autism. Nature Medicine, 29 (4), 936-949. doi: 10.1038/s41591-023-02271-1

Interactions between the lipidome and genetic and environmental factors in autism

2023

Journal Article

Timing of antidepressant discontinuation during pregnancy and postpartum psychiatric outcomes in Denmark and Norway

Trinh, Nhung T. H., Munk-Olsen, Trine, Wray, Naomi R., Bergink, Veerle, Nordeng, Hedvig M. E., Lupattelli, Angela and Liu, Xiaoqin (2023). Timing of antidepressant discontinuation during pregnancy and postpartum psychiatric outcomes in Denmark and Norway. JAMA Psychiatry, 80 (5) yoi230003, 441-450. doi: 10.1001/jamapsychiatry.2023.0041

Timing of antidepressant discontinuation during pregnancy and postpartum psychiatric outcomes in Denmark and Norway

2023

Journal Article

An overview of DNA methylation-derived trait score methods and applications

Nabais, Marta F., Gadd, Danni A., Hannon, Eilis, Mill, Jonathan, McRae, Allan F. and Wray, Naomi R. (2023). An overview of DNA methylation-derived trait score methods and applications. Genome Biology, 24 (1) 28, 28. doi: 10.1186/s13059-023-02855-7

An overview of DNA methylation-derived trait score methods and applications

2023

Journal Article

Genetic correlates of vitamin D-binding protein and 25-hydroxyvitamin D in neonatal dried blood spots

Albiñana, Clara, Zhu, Zhihong, Borbye-Lorenzen, Nis, Boelt, Sanne Grundvad, Cohen, Arieh S., Skogstrand, Kristin, Wray, Naomi R., Revez, Joana A, Privé, Florian, Petersen, Liselotte V., Bulik, Cynthia M., Plana-Ripoll, Oleguer, Musliner, Katherine L., Agerbo, Esben, Børglum, Anders D., Hougaard, David M., Nordentoft, Merete, Werge, Thomas, Mortensen, Preben Bo, Vilhjálmsson, Bjarni J. and McGrath, John J. (2023). Genetic correlates of vitamin D-binding protein and 25-hydroxyvitamin D in neonatal dried blood spots. Nature Communications, 14 (1) 852, 1-16. doi: 10.1038/s41467-023-36392-5

Genetic correlates of vitamin D-binding protein and 25-hydroxyvitamin D in neonatal dried blood spots

2023

Journal Article

Significance tests for R2 of out-of-sample prediction using polygenic scores

Momin, Md. Moksedul, Lee, Soohyun, Wray, Naomi R. and Lee, S. Hong (2023). Significance tests for R2 of out-of-sample prediction using polygenic scores. The American Journal of Human Genetics, 110 (2), 349-358. doi: 10.1016/j.ajhg.2023.01.004

Significance tests for R2 of out-of-sample prediction using polygenic scores

2023

Journal Article

Estimation and implications of the genetic architecture of fasting and non-fasting blood glucose

Qiao, Zhen, Sidorenko, Julia, Revez, Joana A., Xue, Angli, Lu, Xueling, Pärna, Katri, Snieder, Harold, Visscher, Peter M., Wray, Naomi R., Yengo, Loic and Lifelines Cohort Study (2023). Estimation and implications of the genetic architecture of fasting and non-fasting blood glucose. Nature Communications, 14 (1) 451, 1-11. doi: 10.1038/s41467-023-36013-1

Estimation and implications of the genetic architecture of fasting and non-fasting blood glucose