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2025 Journal Article Brain-wide impacts of sedation on spontaneous activity and auditory processing in larval zebrafishFavre-Bulle, Itia A., Muller, Eli, Lee, Conrad, Scholz, Leandro A., Arnold, Joshua, Munn, Brandon, Wainstein, Gabriel, Shine, James M. and Scott, Ethan K. (2025). Brain-wide impacts of sedation on spontaneous activity and auditory processing in larval zebrafish. The Journal of Neuroscience, e0204242025. doi: 10.1523/jneurosci.0204-24.2025 |
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2025 Journal Article Interrogating the Ballistic Regime in Liquids with Rotational Optical TweezersWatson, Mark, Stilgoe, Alexander, Favre-Bulle, Itia and Rubinsztein-Dunlop, Halina (2025). Interrogating the Ballistic Regime in Liquids with Rotational Optical Tweezers. Optica, 12 (2), 246-254. doi: 10.1364/optica.549215 |
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2024 Journal Article Multiscale organization of neuronal activity unifies scale-dependent theories of brain functionMunn, Brandon R., Müller, Eli J., Favre-Bulle, Itia, Scott, Ethan, Lizier, Joseph T., Breakspear, Michael and Shine, James M. (2024). Multiscale organization of neuronal activity unifies scale-dependent theories of brain function. Cell, 187 (25), 7303-7313.e15. doi: 10.1016/j.cell.2024.10.004 |
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2024 Journal Article Shining light in mechanobiology: optical tweezers, scissors, and beyondStilgoe, Alexander B., Favre-Bulle, Itia A., Watson, Mark L., Gomez-Godinez, Veronica, Berns, Michael W., Preece, Daryl and Rubinsztein-Dunlop, Halina (2024). Shining light in mechanobiology: optical tweezers, scissors, and beyond. ACS Photonics, 11 (3), 917-940. doi: 10.1021/acsphotonics.4c00064 |
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2022 Journal Article Optical tweezers across scales in cell biologyFavre-Bulle, Itia A. and Scott, Ethan K. (2022). Optical tweezers across scales in cell biology. Trends in Cell Biology, 32 (11), 932-946. doi: 10.1016/j.tcb.2022.05.001 |
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2022 Journal Article Brain-wide visual habituation networks in wild type and fmr1 zebrafishMarquez-Legorreta, Emmanuel, Constantin, Lena, Piber, Marielle, Favre-Bulle, Itia A., Taylor, Michael A., Blevins, Ann S., Giacomotto, Jean, Bassett, Dani S., Vanwalleghem, Gilles C. and Scott, Ethan K. (2022). Brain-wide visual habituation networks in wild type and fmr1 zebrafish. Nature Communications, 13 (1) 895. doi: 10.1038/s41467-022-28299-4 |
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2021 Journal Article Contributions of luminance and motion to visual escape and habituation in larval zebrafishMancienne, Tessa, Marquez-Legorreta, Emmanuel, Wilde, Maya, Piber, Marielle, Favre-Bulle, Itia, Vanwalleghem, Gilles and Scott, Ethan K. (2021). Contributions of luminance and motion to visual escape and habituation in larval zebrafish. Frontiers in Neural Circuits, 15 748535, 748535. doi: 10.3389/fncir.2021.748535 |
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2020 Journal Article Sound generation in zebrafish with bio-opto-acousticsFavre-Bulle, Itia A., Taylor, Michael A., Marquez-Legorreta, Emmanuel, Vanwalleghem, Gilles, Poulsen, Rebecca E., Rubinsztein-Dunlop, Halina and Scott, Ethan K. (2020). Sound generation in zebrafish with bio-opto-acoustics. Nature Communications, 11 (1) 6120, 6120. doi: 10.1038/s41467-020-19982-5 |
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2020 Journal Article Altered brain-wide auditory networks in a zebrafish model of fragile X syndromeConstantin, Lena, Poulsen, Rebecca E., Scholz, Leandro A., Favre-Bulle, Itia A., Taylor, Michael A., Sun, Biao, Goodhill, Geoffrey J., Vanwalleghem, Gilles C. and Scott, Ethan K. (2020). Altered brain-wide auditory networks in a zebrafish model of fragile X syndrome. BMC Biology, 18 (1) 125, 125. doi: 10.1186/s12915-020-00857-6 |
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2019 Journal Article Optical trapping in vivo: theory, practice, and applicationsFavre-Bulle, Itia A., Stilgoe, Alexander B., Scott, Ethan K. and Rubinsztein-Dunlop, Halina (2019). Optical trapping in vivo: theory, practice, and applications. Nanophotonics, 8 (6), 1023-1040. doi: 10.1515/nanoph-2019-0055 |
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2018 Journal Article Cellular-resolution imaging of vestibular processing across the larval zebrafish brainFavre-Bulle, Itia A., Vanwalleghem, Gilles, Taylor, Michael A., Rubinsztein-Dunlop, Halina and Scott, Ethan K. (2018). Cellular-resolution imaging of vestibular processing across the larval zebrafish brain. Current Biology, 28 (23), 3711-3722. doi: 10.1016/j.cub.2018.09.060 |
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2018 Journal Article Diffuse light-sheet microscopy for stripe-free calcium imaging of neural populationsTaylor, Michael A., Vanwalleghem, Gilles C., Favre-Bulle, Itia A and Scott, Ethan K. (2018). Diffuse light-sheet microscopy for stripe-free calcium imaging of neural populations. Journal of Biophotonics, 11 (12) e201800088, e201800088. doi: 10.1002/jbio.201800088 |
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2018 Journal Article Luminance changes drive directional startle through a thalamic pathwayHeap, Lucy A. L., Vanwalleghem, Gilles, Thompson, Andrew W., Favre-Bulle, Itia A. and Scott, Ethan K. (2018). Luminance changes drive directional startle through a thalamic pathway. Neuron, 99 (2), 293-301.e4. doi: 10.1016/j.neuron.2018.06.013 |
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2018 Journal Article Optical tweezers bring micromachines to biologyFavre-Bulle, I. A., Zhang, S., Kashchuk, A. V., Lenton, I. C.D., Gibson, L. J., Stilgoe, A. B., Nieminen, T. A. and Rubinsztein-Dunlop, H. (2018). Optical tweezers bring micromachines to biology. Optics and Photonics News, 29 (4), 40-47. doi: 10.1364/opn.29.4.000040 |
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2017 Journal Article Optical trapping of otoliths drives vestibular behaviours in larval zebrafishFavre-Bulle, Itia A., Stilgoe, Alexander B., Rubinsztein-Dunlop, Halina and Scott, Ethan K. (2017). Optical trapping of otoliths drives vestibular behaviours in larval zebrafish. Nature Communications, 8 (1) 630, 630. doi: 10.1038/s41467-017-00713-2 |
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2017 Journal Article Erratum: Ultrasensitive rotating photonic probes for complex biological systems (vol 4, pg 1103, 2017)Zhang, Shu, Gibson, Lachlan J., Stilgoe, Alexander B., Favre-Bulle, Itia A., Nieminen, Timo A. and Rubinsztein-Dunlop, Halina (2017). Erratum: Ultrasensitive rotating photonic probes for complex biological systems (vol 4, pg 1103, 2017). Optica, 4 (11), 1372-1372. doi: 10.1364/OPTICA.4.001372 |
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2015 Journal Article Scattering of sculpted light in intact brain tissue, with implications for optogeneticsFavre-Bulle, Itia A., Preece, Daryl, Nieminen, Timo A., Heap, Lucy A., Scott, Ethan K. and Rubinsztein-Dunlop, Halina (2015). Scattering of sculpted light in intact brain tissue, with implications for optogenetics. Scientific Reports, 5 (1) 11501, 1-9. doi: 10.1038/srep11501 |
