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2021 Journal Article Chromatin accessibility and regulatory vocabulary across indicine cattle tissuesAlexandre, Pâmela A., Naval-Sánchez, Marina, Menzies, Moira, Nguyen, Loan T., Porto-Neto, Laercio R., Fortes, Marina R. S. and Reverter, Antonio (2021). Chromatin accessibility and regulatory vocabulary across indicine cattle tissues. Genome Biology, 22 (1) 273, 273. doi: 10.1186/s13059-021-02489-7 |
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2021 Journal Article Genetic parameter estimates for male and female fertility traits using genomic data to improve fertility in Australian beef cattleOlasege, Babatunde S., Tahir, Muhammad S., Gouveia, Gabriela C., Kour, Jagish, Porto-Neto, Laercio R., Hayes, Ben J. and Fortes, Marina R. S. (2021). Genetic parameter estimates for male and female fertility traits using genomic data to improve fertility in Australian beef cattle. Animal Production Science, 61 (18), 1863-1872. doi: 10.1071/an21097 |
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2021 Journal Article Meta-analysis of heifer traits identified reproductive pathways in Bos indicus cattleTahir, Muhammad S., Porto-Neto, Laercio R., Gondro, Cedric, Shittu, Olasege B., Wockner, Kimberley, Tan, Andre W. L., Smith, Hugo R., Gouveia, Gabriela C., Kour, Jagish and Fortes, Marina R. S. (2021). Meta-analysis of heifer traits identified reproductive pathways in Bos indicus cattle. Genes, 12 (5) 768, 768. doi: 10.3390/genes12050768 |
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2021 Journal Article Network analyses predict small RNAs that might modulate gene expression in the testis and epididymis of Bos indicus bullsde Lima, Andressa O., Afonso, Juliana, Edson, Janette, Marcellin, Esteban, Palfreyman, Robin, Porto-Neto, Laercio R., Reverter, Antonio and Fortes, Marina R. S. (2021). Network analyses predict small RNAs that might modulate gene expression in the testis and epididymis of Bos indicus bulls. Frontiers in Genetics, 12 610116, 610116. doi: 10.3389/fgene.2021.610116 |
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2021 Journal Article Single nucleotide polymorphisms affect miRNA target prediction in bovinede Sousa, Marco Antônio Perpétuo, de Athayde, Flavia Regina Florêncio, Maldonado, Mariângela Bueno Cordeiro, de Lima, Andressa Oliveira, Fortes, Marina Rufino S. and Lopes, Flavia Lombardi (2021). Single nucleotide polymorphisms affect miRNA target prediction in bovine. PLoS One, 16 (4 April) e0249406, 1-17. doi: 10.1371/journal.pone.0249406 |
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2020 Journal Article Genome-wide co-expression distributions as a metric to prioritize genes of functional importanceAlexandre, Pâmela A., Hudson, Nicholas J., Lehnert, Sigrid A., Fortes, Marina R. S., Naval-Sánchez, Marina, Nguyen, Loan T., Porto-Neto, Laercio R. and Reverter, Antonio (2020). Genome-wide co-expression distributions as a metric to prioritize genes of functional importance. Genes, 11 (10) 1231, 1231-13. doi: 10.3390/genes11101231 |
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2020 Journal Article X chromosome variants are associated with male fertility traits in two bovine populationsFortes, Marina R. S., Porto-Neto, Laercio R., Satake, Nana, Nguyen, Loan T., Freitas, Ana Claudia, Melo, Thaise P., Scalez, Daiane Cristina Becker, Hayes, Ben, Raidan, Fernanda S. S., Reverter, Antonio and Boe-Hansen, Gry B. (2020). X chromosome variants are associated with male fertility traits in two bovine populations. Genetics Selection Evolution, 52 (1) 46, 46. doi: 10.1186/s12711-020-00563-5 |
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2020 Journal Article Dynamics of gene co-expression networks in time-series data: a case study in Drosophila melanogaster embryogenesisLau, Li Yieng, Reverter, Antonio, Hudson, Nicholas J., Naval-Sanchez, Marina, Fortes, Marina R. S. and Alexandre, Pâmela A. (2020). Dynamics of gene co-expression networks in time-series data: a case study in Drosophila melanogaster embryogenesis. Frontiers in Genetics, 11 517, 517. doi: 10.3389/fgene.2020.00517 |
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2020 Journal Article Genetic regulators of mineral amount in Nelore cattle muscle predicted by a new co-expression and regulatory impact factor approachAfonso, Juliana, Fortes, Marina Rufino Salinas, Reverter, Antonio, Diniz, Wellison Jarles da Silva, Cesar, Aline Silva Mello, Lima, Andressa Oliveira de, Petrini, Juliana, de Souza, Marcela M., Coutinho, Luiz Lehmann, Mourão, Gerson Barreto, Zerlotini, Adhemar, Gromboni, Caio Fernando, Nogueira, Ana Rita Araújo and Regitano, Luciana Correia de Almeida (2020). Genetic regulators of mineral amount in Nelore cattle muscle predicted by a new co-expression and regulatory impact factor approach. Scientific Reports, 10 (1) 8436, 8436. doi: 10.1038/s41598-020-65454-7 |
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2020 Journal Article Gene regulation could be attributed to TCF3 and other key transcription factors in the muscle of pubertal heifersLau, Li Yieng, Nguyen, Loan T., Reverter, Antonio, Moore, Stephen S., Lynn, Aaron, McBride‐Kelly, Liam, Phillips‐Rose, Louis, Plath, Mackenzie, Macfarlane, Rhys, Vasudivan, Vanisha, Morton, Lachlan, Ardley, Ryan, Ye, Yunan and Fortes, Marina R. S. (2020). Gene regulation could be attributed to TCF3 and other key transcription factors in the muscle of pubertal heifers. Veterinary Medicine and Science, 6 (4) vms3.278, 695-710. doi: 10.1002/vms3.278 |
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2019 Journal Article Muscle transcriptome analysis reveals genes and metabolic pathways related to mineral concentration in Bos indicusAfonso, Juliana, Coutinho, Luiz Lehmann, Tizioto, Polyana Cristine, da Silva Diniz, Wellison Jarles, de Lima, Andressa Oliveira, Rocha, Marina Ibelli Pereira, Buss, Carlos Eduardo, Andrade, Bruno Gabriel Nascimento, Piaya, Otávio, da Silva, Juliana Virginio, Lins, Laura Albuquerque, Gromboni, Caio Fernando, Nogueira, Ana Rita Araújo, Fortes, Marina Rufino Salinas, Mourao, Gerson Barreto and de Almeida Regitano, Luciana Correia (2019). Muscle transcriptome analysis reveals genes and metabolic pathways related to mineral concentration in Bos indicus. Scientific Reports, 9 (1) 12715, 12715. doi: 10.1038/s41598-019-49089-x |
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2019 Journal Article Proteomics recapitulates ovarian proteins relevant to puberty and fertility in Brahman heifers (Bos indicus L.)Tahir, Muhammad S., Nguyen, Loan T., Schulz, Benjamin L., Boe-Hansen, Gry A., Thomas, Milton G., Moore, Stephen S., Lau, Li Yieng and Fortes, Marina R S (2019). Proteomics recapitulates ovarian proteins relevant to puberty and fertility in Brahman heifers (Bos indicus L.). Genes, 10 (11) 923, 923. doi: 10.3390/genes10110923 |
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2019 Journal Article Genomic clues of the evolutionary history of Bos indicus cattleUtsunomiya, Y. T., Milanesi, M., Fortes, M. R. S., Porto-Neto, L. R., Utsunomiya, A. T. H., Silva, M. V. G. B., Garcia, J. F. and Ajmone-Marsan, P. (2019). Genomic clues of the evolutionary history of Bos indicus cattle. Animal Genetics, 50 (6) age.12836, 557-568. doi: 10.1111/age.12836 |
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2019 Journal Article Across‐breed validation study confirms and identifies new loci associated with sexual precocity in Brahman and Nellore cattleMelo, Thaise Pinto, Salinas Fortes, Marina Rufino, Hayes, Ben, Albuquerque, Lucia Galvão and Carvalheiro, Roberto (2019). Across‐breed validation study confirms and identifies new loci associated with sexual precocity in Brahman and Nellore cattle. Journal of Animal Breeding and Genetics, 137 (2) jbg.12429, 139-154. doi: 10.1111/jbg.12429 |
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2019 Journal Article RAPID COMMUNICATION: multi-breed validation study unraveled genomic regions associated with puberty traits segregating across tropically adapted breedsMelo, Thaise P., Fortes, Marina R. S., Fernandes Junior, Gerardo A., Albuquerque, Lucia G. and Carvalheiro, Roberto (2019). RAPID COMMUNICATION: multi-breed validation study unraveled genomic regions associated with puberty traits segregating across tropically adapted breeds. Journal of Animal Science, 97 (7) skz121, 3027-3033. doi: 10.1093/jas/skz121 |
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2019 Journal Article Proteomics reveals profound metabolic changes in the alcohol use disorder brainEnculescu, Charmaine, Kerr, Edward D., Yeo, K. Y. Benjamin, Schenk, Gerhard, Fortes, Marina R. S. and Schulz, Benjamin L. (2019). Proteomics reveals profound metabolic changes in the alcohol use disorder brain. ACS Chemical Neuroscience, 10 (5), 2364-2373. doi: 10.1021/acschemneuro.8b00660 |
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2019 Journal Article Polymorphisms in major histocompatibility complex genes and its associations with milk quality in Murrah buffaloesFreitas, Ana C., Stafuzza, Nedenia B., Barbero, Marina M. D., Santos, Daniel J. A., Fortes, Marina R. S. and Tonhati, Humberto (2019). Polymorphisms in major histocompatibility complex genes and its associations with milk quality in Murrah buffaloes. Tropical Animal Health and Production, 52 (1), 415-423. doi: 10.1007/s11250-019-02030-w |
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2018 Journal Article Candidate mutations used to aid the prediction of genetic merit for female reproductive traits in tropical beef cattleFortes, Marina Rufino Salinas, Enculescu, Charmaine, Porto Neto, Laercio R., Lehnert, Sigrid A., McCulloch, Russell and Hayes, Ben (2018). Candidate mutations used to aid the prediction of genetic merit for female reproductive traits in tropical beef cattle. Revista Brasileira de Zootecnia, 47 e20170226. doi: 10.1590/rbz4720170226 |
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2018 Journal Article Combining multi-OMICs information to identify key-regulator genes for pleiotropic effect on fertility and production traits in beef cattleFonseca, Pablo Augusto de Souza, Id-Lahoucine, Samir, Reverter, Antonio, Medrano, Juan F., Fortes, Marina S., Casellas, Joaquim, Miglior, Filippo, Brito, Luiz, Carvalho, Maria Raquel S., Schenkel, Flávio S., Nguyen, Loan T., Porto-Neto, Laercio R., Thomas, Milton G. and Cánovas, Angela (2018). Combining multi-OMICs information to identify key-regulator genes for pleiotropic effect on fertility and production traits in beef cattle. PLOS ONE, 13 (10) e0205295, e0205295. doi: 10.1371/journal.pone.0205295 |
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2018 Journal Article Pre- and post-puberty expression of genes and proteins in the uterus of Bos indicus heifers: the luteal phase effect post-pubertyFortes, M. R.S., Zacchi, L. F., Nguyen, L. T., Raidan, F., Weller, M. M.D.C.A., Choo, J. J.Y., Reverter, A., Rego, J. P.A., Boe-Hansen, G. B., Porto-Neto, L. R., Lehnert, S. A., Cánovas, A., Schulz, B. L., Islas-Trejo, A., Medrano, J. F., Thomas, M. G. and Moore, S. S. (2018). Pre- and post-puberty expression of genes and proteins in the uterus of Bos indicus heifers: the luteal phase effect post-puberty. Animal Genetics, 49 (6), 539-549. doi: 10.1111/age.12721 |
