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2021 Journal Article Drug-resistant tuberculosis in pet ring-tailed lemur, MadagascarLaFleur, Marni, Reuter, Kim E., Hall, Michael B., Rasoanaivo, Hoby H., McKernan, Stuart, Ranaivomanana, Paulo, Michel, Anita, Rabodoarivelo, Marie Sylvianne, Iqbal, Zamin, Rakotosamimanana, Niaina and Lapierre, Simon Grandjean (2021). Drug-resistant tuberculosis in pet ring-tailed lemur, Madagascar. Emerging Infectious Diseases, 27 (3), 977-979. doi: 10.3201/eid2703.202924 |
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2021 Journal Article Freshwater monitoring by nanopore sequencingUrban, Lara, Holzer, Andre, Baronas, J. Jotautas, Hall, Michael B., Braeuninger-Weimer, Philipp, Scherm, Michael J., Kunz, Daniel J., Perera, Surangi N., Martin-Herranz, Daniel E., Tipper, Edward T., Salter, Susannah J. and Stammnitz, Maximilian R. (2021). Freshwater monitoring by nanopore sequencing. eLife, 10 e61504, 1-27. doi: 10.7554/elife.61504 |
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2021 Journal Article Sustainable data analysis with SnakemakeKöster, Johannes, Mölder, Felix, Jablonski, Kim Philipp, Letcher, Brice, Hall, Michael B., Tomkins-Tinch, Christopher H., Sochat, Vanessa, Forster, Jan, Lee, Soohyun, Twardziok, Sven O., Kanitz, Alexander, Wilm, Andreas, Holtgrewe, Manuel, Rahmann, Sven and Nahnsen, Sven (2021). Sustainable data analysis with Snakemake. F1000Research, 10 33, 33. doi: 10.12688/f1000research.29032.2 |
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2019 Journal Article Correction to: Chiron: translating nanopore raw signal directly into nucleotide sequence using deep learningTeng, Haotian, Cao, Minh Duc, Hall, Michael B., Duarte, Tania, Wang, Sheng and Coin, Lachlan J M (2019). Correction to: Chiron: translating nanopore raw signal directly into nucleotide sequence using deep learning. GigaScience, 8 (5) giz049. doi: 10.1093/gigascience/giz049 |
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2019 Journal Article Antibiotic resistance prediction for Mycobacterium tuberculosis from genome sequence data with mykrobe [version 1; peer review: 2 approved, 1 approved with reservations]Hunt, Martin, Bradley, Phelim, Lapierre, Simon Grandjean, Heys, Simon, Thomsit, Mark, Hall, Michael B., Malone, Kerri M., Wintringer, Penelope, Walker, Timothy M., Cirillo, Daniela M., Comas, Iñaki, Farhat, Maha R., Fowler, Phillip, Gardy, Jennifer, Ismail, Nazir, Kohl, Thomas A., Mathys, Vanessa, Merker, Matthias, Niemann, Stefan, Omar, Shaheed Vally, Sintchenko, Vitali, Smith, Grace, van Soolingen, Dick, Supply, Philip, Tahseen, Sabira, Wilcox, Mark, Arandjelovic, Irena, Peto, Tim E.A., Crook, Derrick W. and Iqbal, Zamin (2019). Antibiotic resistance prediction for Mycobacterium tuberculosis from genome sequence data with mykrobe [version 1; peer review: 2 approved, 1 approved with reservations]. Wellcome Open Research, 4 191, 191. doi: 10.12688/wellcomeopenres.15603.1 |
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2018 Journal Article Chiron: Translating nanopore raw signal directly into nucleotide sequence using deep learningTeng, Haotian, Cao, Minh Duc, Hall, Michael B., Duarte, Tania, Wang, Sheng and Coin, Lachlan J. M. (2018). Chiron: Translating nanopore raw signal directly into nucleotide sequence using deep learning. GigaScience, 7 (5). doi: 10.1093/gigascience/giy037 |
