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2011

Journal Article

Lateral transfer of genes and gene fragments in Staphylococcus extends beyond mobile elements

Chan, Cheong Xin, Beiko, Robert G. and Ragan, Mark A. (2011). Lateral transfer of genes and gene fragments in Staphylococcus extends beyond mobile elements. Journal of Bacteriology, 193 (15), 3964-3977. doi: 10.1128/JB.01524-10

Lateral transfer of genes and gene fragments in Staphylococcus extends beyond mobile elements

2011

Journal Article

Non-random sharing of plantae genes

Chan, Cheong Xin and Bhattacharya, Debashish (2011). Non-random sharing of plantae genes. Communicative and Integrative Biology, 4 (3), 361-363. doi: 10.4161/cib.4.3.15700

Non-random sharing of plantae genes

2011

Journal Article

Plastid origin and evolution: New models provide insights into old problems

Chan, Cheong Xin, Gross, Jeferson, Yoon, Hwan Su and Bhattacharya, Debashish (2011). Plastid origin and evolution: New models provide insights into old problems. Plant Physiology, 155 (4), 1552-1560. doi: 10.1104/pp.111.173500

Plastid origin and evolution: New models provide insights into old problems

2011

Journal Article

Red and green algal monophyly and extensive gene sharing found in a rich repertoire of red algal genes

Chan, Cheong Xin, Yang, Chan Yang, Banerjee, Titas, Yoon, Hwan Su, Martone, Patrick T., Estevez, Jose M. and Bhattacharya, Debashish (2011). Red and green algal monophyly and extensive gene sharing found in a rich repertoire of red algal genes. Current Biology, 21 (4), 328-333. doi: 10.1016/j.cub.2011.01.037

Red and green algal monophyly and extensive gene sharing found in a rich repertoire of red algal genes

2011

Book Chapter

Plastid origin and evolution

Chan, Cheong Xin and Bhattacharya, Debashish (2011). Plastid origin and evolution. eLS. (pp. 1-8) Chichester, United Kingdom: John Wiley & Sons. doi: 10.1002/9780470015902.a0023639

Plastid origin and evolution

2010

Journal Article

The origin of plastids

Chan, Cheong Xin and Bhattacharya, Debashish (2010). The origin of plastids. Nature Education, 3 (9), 84-1-84-5.

The origin of plastids

2010

Book Chapter

Porphyra: Complex life histories in a harsh environment

Gantt, Elisabeth, Berg, G. Mine, Bhattacharya, Debashish, Blouin, Nicolas A., Brodie, Juliet A., Chan, Cheong Xin, Collen, Jonas, Cunningham, Francis X., Gross, Jeferson, Grossman, Arthur R., Karpowicz, Steven, Kitade, Yukihiro, Klein, Anita S., Levine, Ira A., Lin, Senjie, Lu, Shan, Lynch, Michael, Minocha, Subhash C., Muller, Kirsten, Neefus, Christopher D., De Oliveira, Mariana Cabral, Rymarquis, Linda, Smith, Alison, Stiller, John W., Wu, Wen-Kai, Yarish, Charles, Zhuang, Yun and Brawley, Susan H. (2010). Porphyra: Complex life histories in a harsh environment. Red algae in the genomic age. (pp. 129-148) edited by Joseph Seckbach and David J. Chapman. New York , NY, U.S.A.: Springer. doi: 10.1007/978-90-481-3795-4_7

Porphyra: Complex life histories in a harsh environment

2009

Journal Article

Lateral transfer of genes and gene fragments in prokaryotes

Chan, Cheong Xin, Beiko, Robert G., Darling, Aaron E. and Ragan, Mark A. (2009). Lateral transfer of genes and gene fragments in prokaryotes. Genome Biology and Evolution, 1, 429-438. doi: 10.1093/gbe/evp044

Lateral transfer of genes and gene fragments in prokaryotes

2009

Journal Article

Are protein domains modules of lateral genetic transfer?

Chan, Cheong Xin, Darling, Aaron E., Beiko, Robert G. and Ragan, Mark A. (2009). Are protein domains modules of lateral genetic transfer?. PLoS One, 4 (2) e4524, e4524.1-e4524.8. doi: 10.1371/journal.pone.0004524

Are protein domains modules of lateral genetic transfer?

2008

Conference Publication

A phylogenomic approach for studying plastid endosymbiosis

Moustafa, Ahmed, Chan, Cheong Xin, Danforth, Megan, Zear, David, Ahmed, Hiba, Jadhav, Nagnath, Savage, Trevor and Bhattacharya, Debashish (2008). A phylogenomic approach for studying plastid endosymbiosis. 19th International Conference on Genome Informatics (GIW 2008), Gold Coast , Qld., Australia, 1 - 3 December 2008. London, United Kingdom: Imperial College Press.

A phylogenomic approach for studying plastid endosymbiosis

2008

Conference Publication

Large-scale detection of recombination in nucleotide sequences

Chan, Cheong Xin, Beiko, Robert G. and Ragan, Mark A. (2008). Large-scale detection of recombination in nucleotide sequences. International Conference on Mathematical Biology 2007, Putrajaya, Malaysia, 4-6 September 2007. Melville, NY, USA: American Institute of Physics. doi: 10.1063/1.2883829

Large-scale detection of recombination in nucleotide sequences

2007

Other Outputs

Units of genetic transfer in prokaryotes

Chan, Cheong Xin (2007). Units of genetic transfer in prokaryotes. PhD Thesis, Institute For Molecular Bioscience, The University of Queensland. doi: 10.14264/132182

Units of genetic transfer in prokaryotes

2007

Other Outputs

A two-phase strategy for detecting recombination in nucleotide sequences

Chan, Cheong Xin, Beiko, Robert G. and Ragan, Mark A. (2007). A two-phase strategy for detecting recombination in nucleotide sequences.

A two-phase strategy for detecting recombination in nucleotide sequences

2007

Conference Publication

A two-phase approach for detecting recombination in nucleotide sequences

Chan, Cheong Xin, Beiko, Robert G. and Ragan, Mark A. (2007). A two-phase approach for detecting recombination in nucleotide sequences. The First Southern African Bioinformatics Workshop, Johannesburg, South Africa, 28-30 January 2007. Johannesburg, South Africa: University of the Witwatersrand.

A two-phase approach for detecting recombination in nucleotide sequences

2006

Journal Article

Detecting Recombination in Evolving Nucleotide Sequences

Chan, Cheong Xin, Beiko, Robert G. and Ragan, Mark A. (2006). Detecting Recombination in Evolving Nucleotide Sequences. BMC Bioinformatics, 7 (Article 412) 412, 1-15. doi: 10.1186/1471-2105-7-412

Detecting Recombination in Evolving Nucleotide Sequences

2006

Journal Article

Trends in Seaweed Research

Chan, Cheong-Xin, Ho, Chai-Ling and Phang, Siew-Moi (2006). Trends in Seaweed Research. Trends in Plant Science, 11 (4), 165-166. doi: 10.1016/j.tplants.2006.02.003

Trends in Seaweed Research

2005

Journal Article

A Word-Oriented Approach to Alignment Validation

Beiko, Robert G., Chan, Cheong Xin and Ragan, Mark A. (2005). A Word-Oriented Approach to Alignment Validation. Bioinformatics, 21 (10), 2230-2239. doi: 10.1093/bioinformatics/bti335

A Word-Oriented Approach to Alignment Validation

2005

Journal Article

Seaweed diversity of Langkawi with emphasis on Northeast Langkawi

Phang, Siew-Moi, Wong, Ching-Lee, Lim, Phaik-Eem, Yeong, Hui-Yin and Chan, Cheong Xin (2005). Seaweed diversity of Langkawi with emphasis on Northeast Langkawi. Malaysian Journal of Science, 24, 77-94.

Seaweed diversity of Langkawi with emphasis on Northeast Langkawi

2004

Journal Article

Comparing Different Approaches in Large-Scale Seaweed Gene Discovery

Chan, Cheong Xin (2004). Comparing Different Approaches in Large-Scale Seaweed Gene Discovery. Bioinformatics India, 2 (3), 106-111.

Comparing Different Approaches in Large-Scale Seaweed Gene Discovery

2004

Journal Article

Optimisation of RNA Extraction from Gracilaria changii (Gracilariales, Rhodophyta)

Chan, Cheong Xin, Teo, Swee-Sen, Ho, Chai-Ling, Othman, Rofina Yasmin and Phang, Siew-Moi (2004). Optimisation of RNA Extraction from Gracilaria changii (Gracilariales, Rhodophyta). Journal of Applied Phycology, 16 (4), 297-301. doi: 10.1023/B:JAPH.0000047782.20940.de

Optimisation of RNA Extraction from Gracilaria changii (Gracilariales, Rhodophyta)