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2023 Journal Article Evidence of host specificity in Lactobacillus johnsonii genomes and its influence on probiotic potential in poultryJohnson, Abigail, Miller, Elizabeth A., Weber, Bonnie, Figueroa, Cristian Flores, Aguayo, Jeannette Munoz, Johny, Anup Kollanoor, Noll, Sally, Brannon, Jeanine, Kozlowicz, Briana and Johnson, Timothy J. (2023). Evidence of host specificity in Lactobacillus johnsonii genomes and its influence on probiotic potential in poultry. Poultry Science, 102 (9) 102858, 1-13. doi: 10.1016/j.psj.2023.102858 |
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2023 Journal Article Effects of a postbiotic, with and without a saponin-based product, on turkey performanceChaney, Evan, Miller, Elizabeth A., Firman, Jeffrey, Binnebose, Andrea, Kuttappan, Vivek and Johnson, Timothy J. (2023). Effects of a postbiotic, with and without a saponin-based product, on turkey performance. Poultry Science, 102 (5) 102607, 1-5. doi: 10.1016/j.psj.2023.102607 |
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2023 Journal Article Efficacy of antibiotic and non-antibiotic interventions in preventing and treating necrotic enteritis in broiler chickens: a systematic reviewBueno, Irene, Ricke, Isabel, Hwang, Haejin, Smith, Emily, Nault, Andre, Johnson, Timothy J. and Singer, Randall S. (2023). Efficacy of antibiotic and non-antibiotic interventions in preventing and treating necrotic enteritis in broiler chickens: a systematic review. Avian Diseases, 67 (1), 20-32. doi: 10.1637/aviandiseases-D-22-00069 |
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2023 Journal Article IFI27 transcription is an early predictor for COVID-19 outcomes, a multi-cohort observational studyShojaei, Maryam, Shamshirian, Amir, Monkman, James, Grice, Laura, Tran, Minh, Tan, Chin Wee, Teo, Siok Min, Rodrigues Rossi, Gustavo, McCulloch, Timothy R., Nalos, Marek, Raei, Maedeh, Razavi, Alireza, Ghasemian, Roya, Gheibi, Mobina, Roozbeh, Fatemeh, Sly, Peter D., Spann, Kirsten M., Chew, Keng Yih, Zhu, Yanshan, Xia, Yao, Wells, Timothy J., Senegaglia, Alexandra Cristina, Kuniyoshi, Carmen Lúcia, Franck, Claudio Luciano, dos Santos, Anna Flavia Ribeiro, Noronha, Lucia de, Motamen, Sepideh, Valadan, Reza, Amjadi, Omolbanin ... Tang, Benjamin (2023). IFI27 transcription is an early predictor for COVID-19 outcomes, a multi-cohort observational study. Frontiers in Immunology, 13 1060438, 1-14. doi: 10.3389/fimmu.2022.1060438 |
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2022 Journal Article Estimating biofuel contaminant concentration from 4D ERT with mixing modelsGlaser, D. R., Henderson, R. D., Werkema, D. D., Johnson, T. J. and Versteeg, R. J. (2022). Estimating biofuel contaminant concentration from 4D ERT with mixing models. Journal of Contaminant Hydrology, 248 104027. doi: 10.1016/j.jconhyd.2022.104027 |
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2022 Journal Article CIS and TGF ‐β regulatory pathways influence immunity to bacterial infectionMcCulloch, Timothy R., Rossi, Gustavo R., Schreuder, Jaring, Belz, Gabrielle T., Wells, Timothy J. and Souza‐Fonseca‐Guimaraes, Fernando (2022). CIS and TGF ‐β regulatory pathways influence immunity to bacterial infection. Immunology, 167 (1), 54-63. doi: 10.1111/imm.13516 |
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2022 Journal Article Editorial: The Interplay of Host-Microbiome-Pathogen on Infectious DiseasesMaurer, John J., Simoes-Barbosa, Augusto, Johnson, Timothy J. and Conway, Tyrrell (2022). Editorial: The Interplay of Host-Microbiome-Pathogen on Infectious Diseases. Frontiers in Microbiology, 13 924807. doi: 10.3389/fmicb.2022.924807 |
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2022 Journal Article Genomic diversity and antimicrobial resistance of Prevotella species isolated from chronic lung disease airwaysWebb, Kasey A., Olagoke, Olusola, Baird, Timothy, Neill, Jane, Pham, Amy, Wells, Timothy J., Ramsay, Kay A., Bell, Scott C., Sarovich, Derek S. and Price, Erin P. (2022). Genomic diversity and antimicrobial resistance of Prevotella species isolated from chronic lung disease airways. Microbial Genomics, 8 (2) 000754. doi: 10.1099/mgen.0.000754 |
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2022 Journal Article Inhibition of the master regulator of Listeria monocytogenes virulence enables bacterial clearance from spacious replication vacuoles in infected macrophagesTran, Thao Thanh, Mathmann, Carmen D., Gatica-Andrades, Marcela, Rollo, Rachel F., Oelker, Melanie, Ljungberg, Johanna K., Nguyen, Tam T. K., Zamoshnikova, Alina, Kummari, Lalith K., Wyer, Orry J. K., Irvine, Katharine M., Melo-Bolívar, Javier, Gross, Annette, Brown, Darren, Mak, Jeffrey Y. W., Fairlie, David P., Hansford, Karl A., Cooper, Matthew A., Giri, Rabina, Schreiber, Veronika, Joseph, Shannon R., Simpson, Fiona, Barnett, Timothy C., Johansson, Jörgen, Dankers, Wendy, Harris, James, Wells, Timothy J., Kapetanovic, Ronan, Sweet, Matthew J. ... Blumenthal, Antje (2022). Inhibition of the master regulator of Listeria monocytogenes virulence enables bacterial clearance from spacious replication vacuoles in infected macrophages. PLoS Pathogens, 18 (1) e1010166, e1010166. doi: 10.1371/journal.ppat.1010166 |
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2022 Journal Article Effect of plant-derived antimicrobials against multidrug-resistant Salmonella Heidelberg in ground TurkeyDewi, Grace, Manjankattil, Shijinaraj, Peichel, Claire, Jia, Shiliang, Nair, Divek, Vickers, Zata, Johnson, Timothy J., Cardona, Carol, Noll, Sally and Johny, Anup Kollanoor (2022). Effect of plant-derived antimicrobials against multidrug-resistant Salmonella Heidelberg in ground Turkey. Poultry Science, 101 (3) 101581, 101581. doi: 10.1016/j.psj.2021.101581 |
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2021 Journal Article Inferior outcomes in lung transplant recipients with serum Pseudomonas aeruginosa specific cloaking antibodiesDivithotawela, Chandima, Pham, Amy, Bell, Peter T., Ledger, Emma L., Tan, Maxine, Yerkovich, Stephanie, Grant, Michelle, Hopkins, Peter M., Wells, Timothy J. and Chambers, Daniel C. (2021). Inferior outcomes in lung transplant recipients with serum Pseudomonas aeruginosa specific cloaking antibodies. The Journal of Heart and Lung Transplantation, 40 (9), 951-959. doi: 10.1016/j.healun.2021.05.016 |
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2021 Journal Article Anti-LPS IgA and IgG can inhibit serum killing of Pseudomonas aeruginosa in patients with cystic fibrosisPham, Amy, Ledger, Emma L., Coggon, Carrie F., Henderson, Ian R., Reid, David W., Bell, Scott C., Smith, Daniel J. and Wells, Timothy J. (2021). Anti-LPS IgA and IgG can inhibit serum killing of Pseudomonas aeruginosa in patients with cystic fibrosis. Infection and Immunity, 89 (12) e00412-21, e0041221. doi: 10.1128/iai.00412-21 |
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2021 Journal Article Oral vaccination reduces the effects of Lawsonia intracellularis challenge on the swine small and large intestine microbiomeLeite, Fernando L., Winfield, Brittanie, Miller, Elizabeth A., Weber, Bonnie P., Johnson, Timothy J., Sylvia, Fred, Vasquez, Erika, Vannucci, Fabio, Beckler, Dana and Isaacson, Richard E. (2021). Oral vaccination reduces the effects of Lawsonia intracellularis challenge on the swine small and large intestine microbiome. Frontiers in Veterinary Science, 8 692521. doi: 10.3389/fvets.2021.692521 |
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2021 Journal Article Towards efficient immunotherapy for bacterial infectionMcCulloch, Timothy R., Wells, Timothy J. and Souza-Fonseca-Guimaraes, Fernando (2021). Towards efficient immunotherapy for bacterial infection. Trends in Microbiology, 30 (2), 158-169. doi: 10.1016/j.tim.2021.05.005 |
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2021 Journal Article Mediation of interleukin-23 and tumor necrosis factor–driven reactive arthritis by Chlamydia-infected macrophages in SKG miceRomand, Xavier, Liu, Xiao, Rahman, M. Arifur, Bhuyan, Zaied Ahmed, Douillard, Claire, Arora Kedia, Reena, Stone, Nathan, Roest, Dominique, Chew, Zi Huai, Cameron, Amy J., Rehaume, Linda M., Bozon, Aurélie, Habib, Mohammed, Armitage, Charles W., Nguyen, Minh Vu Chuong, Favier, Bertrand, Beagley, Kenneth, Maurin, Max, Gaudin, Philippe, Thomas, Ranjeny, Wells, Timothy J. and Baillet, Athan (2021). Mediation of interleukin-23 and tumor necrosis factor–driven reactive arthritis by Chlamydia-infected macrophages in SKG mice. Arthritis and Rheumatology, 73 (7) art.41653, 1200-1210. doi: 10.1002/art.41653 |
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2021 Journal Article BamA and BamD are essential for the secretion of trimeric autotransporter adhesinsRooke, Jessica L., Icke, Christopher, Wells, Timothy J, Rossiter, Amanda E., Browning, Douglas F., Morris, Faye C., Leo, Jack C., Schütz, Monika S., Autenrieth, Ingo B., Cunningham, Adam F., Linke, Dirk and Henderson, Ian R. (2021). BamA and BamD are essential for the secretion of trimeric autotransporter adhesins. Frontiers in Microbiology, 12 628879, 1-10. doi: 10.3389/fmicb.2021.628879 |
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2021 Journal Article Antibody-dependent enhancement of bacterial disease: prevalence, mechanisms and treatmentTorres, Von Vergel L., Coggon, Carrie F. and Wells, Timothy J. (2021). Antibody-dependent enhancement of bacterial disease: prevalence, mechanisms and treatment. Infection and Immunity, 89 (4) e00054-21, 1-15. doi: 10.1128/IAI.00054-21 |
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2021 Journal Article Streptococcus species enriched in the oral cavity of patients with RA are a source of peptidoglycan-polysaccharide polymers that can induce arthritis in miceMoentadj, Rabia, Wang, Yiwen, Bowerman, Kate, Rehaume, Linda, Nel, Hendrik, O Cuiv, Paraic, Stephens, Juliette, Baharom, Amalina, Maradana, Muralidhara, Lakis, Vanessa, Morrison, Mark, Wells, Timothy, Hugenholtz, Philip, Benham, Helen, Le Cao, Kim-Anh and Thomas, Ranjeny (2021). Streptococcus species enriched in the oral cavity of patients with RA are a source of peptidoglycan-polysaccharide polymers that can induce arthritis in mice. Annals of the Rheumatic Diseases, 80 (5) annrheumdis-2020-219009, annrheumdis-2020. doi: 10.1136/annrheumdis-2020-219009 |
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2021 Journal Article Assessment of two DNA extraction kits for profiling poultry respiratory microbiota from multiple sample typesAbundo, Michael E. C., Ngunjiri, John M., Taylor, Kara J. M., Ji, Hana, Ghorbani, Amir, Mahesh, K. C., Weber, Bonnie P., Johnson, Timothy J. and Lee, Chang-Won (2021). Assessment of two DNA extraction kits for profiling poultry respiratory microbiota from multiple sample types. PLoS One, 16 (1) e0241732, 1-19. doi: 10.1371/journal.pone.0241732 |
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2020 Journal Article Structure of dual-BON domain protein DolP identifies phospholipid binding as a new mechanism for protein localizationBryant, Jack Alfred, Morris, Faye C., Knowles, Timothy J., Maderbocus, Riyaz, Heinz, Eva, Boelter, Gabriela, Alodaini, Dema, Colyer, Adam, Wotherspoon, Peter J., Staunton, Kara A., Jeeves, Mark, Browning, Douglas F., Sevastsyanovich, Yanina R., Wells, Timothy J., Rossiter, Amanda E., Bavro, Vassiliy N., Sridhar, Pooja, Ward, Douglas G., Chong, Zhi-Soon, Goodall, Emily C. A., Icke, Christopher, Teo, Alvin, Chng, Shu-Sin, Roper, David I., Lithgow, Trevor, Cunningham, Adam F., Banzhaf, Manuel, Overduin, Michael and Henderson, Ian R. (2020). Structure of dual-BON domain protein DolP identifies phospholipid binding as a new mechanism for protein localization. eLife, 9 e62614, 1-61. doi: 10.7554/elife.62614 |
